FFCP PHASE1:Hg19::chr4:671754..671765,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7586 | |||
|TSSclassifier=strong | |||
|UniProt=D6RA88 | |||
|association_with_transcript=11bp_to_ENST00000513662_5end | |||
|cluster_id=chr4:671754..671765,+ | |||
|coexpression_cluster_id=C134 | |||
|description=CAGE_peak_8_at_MYL5_5end | |||
|id=chr4:671754..671765,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.56e-18!9;CL:0000594!8.58e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0002575;4.09e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,4.09e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.09e-11;2!UBERON:0010056;4.09e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!9.74e-15!2;UBERON:0001723!2.42e-10!3;UBERON:0001033!2.42e-10!3;UBERON:0010056!2.42e-10!3;UBERON:0002426!2.19e-08!1;UBERON:0003831!2.19e-08!1;UBERON:0003898!2.19e-08!1;UBERON:0004830!2.19e-08!1;UBERON:0001774!2.19e-08!1;UBERON:0003830!2.19e-08!1;UBERON:0005175!2.19e-08!1;UBERON:0003897!2.19e-08!1;UBERON:0001103!2.19e-08!1;UBERON:0010084!2.19e-08!1;UBERON:0007029!2.35e-08!1;UBERON:0000989!4.11e-08!1;UBERON:0008811!4.11e-08!1;UBERON:0006258!4.11e-08!1;UBERON:0005876!4.11e-08!1;UBERON:0004874!4.11e-08!1;UBERON:0001736!4.71e-08!1;UBERON:0006298!4.71e-08!1;UBERON:0001301!7.10e-08!1;UBERON:0000166!7.96e-08!21;UBERON:0001134!1.37e-07!61;UBERON:0002036!1.37e-07!61;UBERON:0003082!1.37e-07!61;UBERON:0002385!2.64e-07!63;UBERON:0001015!2.64e-07!63;UBERON:0000383!2.64e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.38e-27;3!UBERON:0001033;2.38e-27;3!UBERON:0002426;3.45e-21;1!UBERON:0003831;3.45e-21;1!UBERON:0003898;3.45e-21;1!UBERON:0004830;3.45e-21;1!UBERON:0003830;3.45e-21;1!UBERON:0005175;3.45e-21;1!UBERON:0001774;3.45e-21;1!UBERON:0001103;3.45e-21;1!UBERON:0007029;4.22e-21;1!UBERON:0001134;6.25e-12;16!UBERON:0002036;6.25e-12;16!UBERON:0000341;2.23e-11;2!UBERON:0005090;2.73e-11;2!UBERON:0001630;2.73e-11;2!UBERON:0003127;3.35e-11;2!UBERON:0000922;3.17e-09;49!UBERON:0000020;2.25e-08;23!UBERON:0001032;4.75e-08;24!UBERON:0004456;4.75e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.08e-27,3;UBERON:0001033,2.08e-27,3;UBERON:0010056,2.08e-27,3;UBERON:0002426,3.45e-21,1;UBERON:0003831,3.45e-21,1;UBERON:0003898,3.45e-21,1;UBERON:0004830,3.45e-21,1;UBERON:0003830,3.45e-21,1;UBERON:0005175,3.45e-21,1;UBERON:0001774,3.45e-21,1;UBERON:0001103,3.45e-21,1;UBERON:0010084,3.45e-21,1;UBERON:0007029,4.22e-21,1;UBERON:0000341,2.23e-11,2;UBERON:0005090,2.73e-11,2;UBERON:0001630,2.73e-11,2;UBERON:0003127,3.35e-11,2;UBERON:0001042,6.28e-09,10;UBERON:0009145,6.28e-09,10;UBERON:0006562,3.37e-08,11;UBERON:0000020,4.75e-08,24;UBERON:0001032,4.75e-08,24;UBERON:0004456,4.75e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0,0,0.275673144969061,0,0.145016693914229,0.767039646744908,16.2928625233529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.12990370390266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.615976841137482,150.775876073966,5.34282092365053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,24.0445075778378,0,0,0,0,0.404234377916439,1.74173398317569,28.4053639900783,0,0,2.66128285236811,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@MYL5 | |||
}} |
Latest revision as of 06:35, 18 September 2015
Short description: | p8@MYL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MYL5_5end |
Coexpression cluster: | C134_skeletal_diaphragm_tongue_throat_Skeletal_skin_penis |
Association with transcript: | 11bp_to_ENST00000513662_5end |
EntrezGene: | MYL5 |
HGNC: | 7586 |
UniProt: | D6RA88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 4.09e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.08e-27 | 3 |
gustatory system | 2.08e-27 | 3 |
future tongue | 2.08e-27 | 3 |
chest muscle | 3.45e-21 | 1 |
respiratory system muscle | 3.45e-21 | 1 |
skeletal muscle of trunk | 3.45e-21 | 1 |
respiratory system skeletal muscle | 3.45e-21 | 1 |
thoracic segment muscle | 3.45e-21 | 1 |
chest organ | 3.45e-21 | 1 |
muscle of trunk | 3.45e-21 | 1 |
diaphragm | 3.45e-21 | 1 |
future diaphragm | 3.45e-21 | 1 |
surface | 4.22e-21 | 1 |
throat | 2.23e-11 | 2 |
muscle structure | 2.73e-11 | 2 |
muscle organ | 2.73e-11 | 2 |
open tracheal system trachea | 3.35e-11 | 2 |
chordate pharynx | 6.28e-09 | 10 |
pharyngeal region of foregut | 6.28e-09 | 10 |
pharynx | 3.37e-08 | 11 |
sense organ | 4.75e-08 | 24 |
sensory system | 4.75e-08 | 24 |
entire sense organ system | 4.75e-08 | 24 |