FFCP PHASE1:Hg19::chrX:135863609..135863618,-: Difference between revisions
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|id=chrX:135863609..135863618,-
|short_description=p30@ARHGEF6
|description=CAGE_peak_30_at_ARHGEF6_5end
|association_with_transcript=-106bp_to_ENST00000535736,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9459 | |EntrezGene=9459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=685 | |HGNC=685 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B2,Q15052,Q8N4Q3 | |UniProt=F5H8B2,Q15052,Q8N4Q3 | ||
|association_with_transcript=-106bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | |||
|cluster_id=chrX:135863609..135863618,- | |||
|coexpression_cluster_id=C110 | |||
|description=CAGE_peak_30_at_ARHGEF6_5end | |||
|id=chrX:135863609..135863618,- | |||
|ontology_enrichment_celltype=CL:0002274!2.36e-16!5;CL:0000457!2.36e-16!5;CL:0002191!2.36e-16!5;CL:0000097!2.36e-16!5;CL:0000831!2.36e-16!5;CL:0002028!2.36e-16!5;CL:0000163!3.86e-09!9;CL:0002504!1.21e-07!3;CL:1000279!1.21e-07!3;CL:1000280!1.21e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.94e-11;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.12e-50;1!UBERON:0004872;2.26e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;1.04e-25;8!DOID:169;1.32e-09;6!DOID:8692;3.52e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.11e-25,8;DOID:169,1.32e-09,6;DOID:8692,1.92e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.21e-13;4!UBERON:0000013;2.94e-11;5!UBERON:0002410;2.94e-11;5!UBERON:0000010;7.91e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.13e-13,4;UBERON:0004340,1.13e-13,4;UBERON:0000013,2.94e-11,5;UBERON:0002410,2.94e-11,5;UBERON:0003124,2.18e-08,7;UBERON:0000010,7.91e-07,8 | |||
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|short_description=p30@ARHGEF6 | |||
}} | }} |
Latest revision as of 15:28, 19 September 2015
Short description: | p30@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_ARHGEF6_5end |
Coexpression cluster: | C110_leukemia_chronic_Eosinophils_acute_Whole_CD34_Lymphatic |
Association with transcript: | -106bp_to_ENST00000535736, NM_004840, uc004fab.2_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | F5H8B2Q15052Q8N4Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placenta | 1.13e-13 | 4 |
allantois | 1.13e-13 | 4 |
sympathetic nervous system | 2.94e-11 | 5 |
autonomic nervous system | 2.94e-11 | 5 |
chorion | 2.18e-08 | 7 |
peripheral nervous system | 7.91e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.11e-25 | 8 |
neuroendocrine tumor | 1.32e-09 | 6 |
myeloid leukemia | 1.92e-07 | 31 |