FFCP PHASE1:Hg19::chr5:126112794..126112928,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4001 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |||
|TSSclassifier=strong | |||
|UniProt=P20700,E9PBF6,B4DZT3 | |||
|association_with_transcript=0bp_to_ENST00000261366,ENST00000395354,ENST00000472034,ENST00000492190,ENST00000504788,NM_001198557,uc003kuc.2,uc003kud.1,uc010jdb.1,uc011cxb.1_5end | |||
|cluster_id=chr5:126112794..126112928,+ | |||
|description=CAGE_peak_1_at_LMNB1_5end | |||
|id=chr5:126112794..126112928,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.58e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.29e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,6.58e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.07e-37!235;DOID:14566!1.51e-34!239;DOID:2531!1.07e-23!51;DOID:0060083!1.07e-23!51;DOID:1240!1.67e-19!39;DOID:0050686!1.62e-18!137;DOID:0050687!1.04e-17!143;DOID:8692!4.74e-15!31;DOID:305!6.24e-14!106;DOID:3095!5.74e-07!22;DOID:2994!5.74e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.26e-15;39!DOID:8692;1.09e-14;31!DOID:2531;1.32e-14;51!DOID:0060083;1.32e-14;51!DOID:3095;5.74e-07;22!DOID:2994;5.74e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.06e-37,235;DOID:14566,1.51e-34,239;DOID:2531,1.07e-23,51;DOID:0060083,1.07e-23,51;DOID:1240,1.67e-19,39;DOID:0050686,1.62e-18,137;DOID:0050687,1.04e-17,143;DOID:8692,4.74e-15,31;DOID:305,6.24e-14,106;DOID:3095,5.74e-07,22;DOID:2994,5.74e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.45342703416445,6.20891519283851,0.986680828671798,2.00146596706261,0,1.74467704820074,12.6649939084155,2.52687949370732,0.783556884599516,34.6484850467128,30.7032513907868,73.3963010357379,42.9940174512379,4.20805600064159,4.30816588446291,4.70627602516243,4.21886169616784,2.19093027116212,6.34312638427659,88.1546775829801,80.1722716589914,47.3316629431913,108.483439122671,161.785570436149,173.248842640828,153.973012582122,172.164936076536,171.195949357252,25.1753137183299,19.9591287010551,18.5779347979291,23.9049518364521,20.7832083956993,3.69754010166788,137.504281030035,81.4629702152925,81.6209221350875,16.6198622559563,13.2359335330294,21.0500544594376,9.40444991807682,6.15397965436061,8.49999373192816,7.99690313287606,17.3822934096852,14.0698755488933,10.9241647345672,16.0355476328512,11.7688420940139,121.406189559947,122.957139133968,100.031983242872,13.1003358679915,24.5284179761854,23.0225027210381,8.28266293987461,14.191119803008,4.04502272001152,24.4867113896722,20.2185287057939,17.9014395223732,316.657248179247,201.258830540227,233.144938541384,11.0279510678862,14.7520158419696,17.4390229718761,116.076883348615,106.903998276141,74.7129625785601,27.848377121135,19.5187147073409,13.2914202725171,16.9004229049553,8.50417199860174,12.9988360215193,38.6410491143943,32.1378550680824,63.1651555719525,6.27028036230747,6.76316702476906,9.1332076882317,7.03984977845291,18.0225741716503,10.6741110463627,19.6295902380593,14.0138595462604,12.0698012390441,7.93253847341835,10.494591299889,12.5226853204079,9.39579502993502,20.6427543187624,11.8954195721123,17.3757654524276,107.987474757782,15.9334913792205,22.7946242394516,25.0833828779401,26.2482797763365,20.8590250645498,19.8848078408588,13.6378709885538,40.2191749355477,19.4439898933393,18.8303810396078,33.0380713793319,82.4908099033348,72.3129972432923,129.577068827697,96.1698061894752,53.0339646895146,13.3457906845854,12.3068780921268,11.4989076185474,80.449633315272,18.7778041864941,18.8995095015446,17.2053390573262,13.3797474016121,8.46408490013344,13.3063286222772,12.6483100025329,10.4949021146623,12.4930726552346,13.0227488624209,13.9591759476578,20.362281065698,19.7905744879795,22.5926070057166,7.31420598941885,40.2420515822182,23.9102990647402,49.155724724301,6.01605492763067,10.2841028462185,21.4727205703797,2.91980922181582,83.0015694700516,63.1928782768307,63.8558891989026,4.25681995367566,12.3860398019464,51.1682531042513,2.59637914923747,4.00498395788315,5.31831842075461,18.840759320122,19.4478269665243,18.9443325678078,46.510403323809,29.2479762336082,47.5582487202404,34.4837844573646,51.1789312176085,63.8273857300956,51.6217567345922,10.8535038851118,10.6729878806013,20.0832367658802,18.5301485870208,6.0821768457481,26.1146401576541,51.1051681680757,17.012980905517,91.7108209477499,130.002506750552,128.264476270504,56.7271558623768,38.9198920422933,54.5941196912614,15.8136500923276,31.022421131866,17.4437620857014,3.97577561356255,28.7451261478596,0.662045904066094,46.7543691820566,60.6482933559191,24.6698144062615,13.8773694448616,13.0733800661095,35.4780580355734,30.4446118877495,82.3847991691832,21.0386824426455,10.37116664064,40.303286275413,14.3593635341947,29.0940628987669,17.6349443051125,117.434498643765,122.375945942307,143.540724449698,21.4361879817638,94.0910870608143,7.12947890112782,7.12801714369232,13.5996811103206,25.4845181342647,9.3420358436111,82.4846958374924,133.501460703386,37.4036555903647,64.968687890364,26.6644382345147,17.4276148331652,48.2086778430089,111.400963762783,4.27114777637135,16.7426201916054,70.8214986759189,21.847136198549,16.7466351029659,9.1197259602479,83.7130607916681,33.2260187599687,69.1668541428874,9.29703976287223,7.27407255684654,42.2461415094771,26.8000581285523,46.1204811084526,3.28543450377605,11.1825909442242,8.31733326628111,139.171998693868,152.674293106351,146.055786186985,129.161674549152,162.242307113029,138.32641908974,12.5159625863853,12.2215778256648,37.2964287651697,0,1.44375896333917,63.8856720215157,86.14677662991,85.7999266385196,64.4116800757181,73.6432521032333,78.2993043066619,54.8763424211869,59.6513253981052,67.3307524656183,92.269431828081,46.2797853551371,27.5754587592038,16.1709582524096,8.87285243752816,14.7424082501644,5.90789906681404,253.841282163424,49.9333060485041,31.5684770949287,2.85350742062426,2.24803506515239,29.5555178890195,18.2399236962303,18.8968817079988,62.3960871167747,59.175850230362,45.21285794028,7.27933904262094,28.1514573134094,45.8355657450845,39.3826095125618,86.9224837755203,99.5843948030052,9.60246323740849,12.1682217872404,46.9674472832381,2.81201501960331,3.02367830757947,11.9091081683605,21.5836039713864,30.516563543966,34.504441124869,10.8385912337108,53.1812541439885,6.21984346622316,25.6533517082191,3.66103056936502,30.8599766259942,20.627374980147,18.7547915536075,37.6359381249951,49.4600239902986,41.7476850403045,13.7196687662678,90.2655228980154,71.4974512886579,98.9333475724616,1.03417372606222,0,77.767853235152,6.64845291462176,27.0419335969552,79.2198712727398,112.06081429839,75.13105448254,12.2961074546007,1.62786481617433,90.5564370458846,50.1633723812352,9.95097456479128,116.416925321214,0.301439377059586,0,7.39800134747222,4.86495122564762,8.03611346291402,14.7583757638122,8.14724508671381,5.7430967917057,144.063274091126,13.75422413342,29.999543092356,37.9609242068579,225.066969139003,21.2793221018081,27.6003295820182,23.2300895666345,99.0969034467607,84.5909050074541,98.980968035545,69.184217583086,114.828975297569,15.7291475028908,14.9580729602012,28.5946704270864,3.43536176813592,6.00204625271613,5.15403545029498,4.99130067673937,16.593895958136,8.35822799679854,21.6711617736519,0.601892199455438,0,8.27784570340039,63.1014318608665,37.6113103825074,27.8896402442546,8.2236486134351,16.1277409191102,19.0226584033056,24.8071330941409,27.6424374710921,18.1876542867756,21.6366071363646,61.0828392525954,0.496215615637554,7.21271274453894,3.64858122762996,0.640695746278505,6.65219423786715,1.93024705372329,0,62.6091356838782,30.5406167538579,51.8222354447136,34.270792326119,45.7868891132239,87.7439604035177,4.41114234667227,1.01289087829486,50.4035427442624,69.0125526745458,4.98272776845812,37.4495678713152,40.664097991131,58.0418829190873,93.5291037780868,43.0650645882933,67.102696601829,69.3982317528184,117.890090191768,41.6413582263781,46.8737336950865,31.1047659790009,56.0727800699084,40.7227244375075,91.1170251719266,65.7779629937804,58.0386701275279,60.0093292772351,45.2660211065594,11.7136222079149,7.62503486193145,126.732139308587,97.4437194062144,8.03971753194641,18.8517471350591,22.4957501781823,10.5371082938413,96.7425315479967,111.904178875348,110.958440850047,41.7864752537584,73.8134972023423,108.237816818448,28.4012193713092,1.15699440752685,4.22818148203234,19.7799704366605,1.6185244936888,2.32422774648643,5.66662224295152,7.6674099717666,15.7097125889805,2.66153015158511,2.60979897622522,2.96518750566272,5.58187058293766,30.8891446568524,29.7396659235602,9.15024930834359,24.0543923832654,3.85145089230528,15.5919591483709,12.5591782431877,33.9958944832465,51.8874986201143,59.4952631845716,7.07638685506606,0,11.7952367746915,50.2262751262278,5.11798328225697,3.16950440270266,17.6084885716302,22.0592473847792,11.3008116620243,18.7464216805682,5.97095077717098,2.63070531152258,6.94530641120025,20.3327373134456,4.66693867014219,28.1939383270773,27.0427778430952,68.8374490579447,11.0038925934696,7.133421029625,30.864212574142,3.79993743535795,5.59801318031833,104.734595959337,64.7379232453218,11.2579871888849,11.3951386841084,9.80018863751903,8.84951727301724,6.02707521739722,1.68471475667626,7.98174276366016,2.06751060186264,16.2383234954294,9.94028369285088,23.9251818613148,13.8174429765518,17.2772154696202,14.9148861574325,12.9607544937148,17.4487538784739,151.583356929884,21.1745568157939,95.0756038006403,104.792990770905,196.061860434989,196.778338701713,150.338975183279,95.1993601734535,55.5365573383863,81.0709821832471,108.423728051702,111.19568253293,233.940546009022,166.080689519405,95.2411012942255,145.421637131577,211.81567106178,252.451433696001,216.755734984376,169.004629619836,162.223123554866,155.007542769444,151.832718957837,84.4076572136814,281.190235634195,139.088760810915,71.6707547961355,150.548529535015,146.626485291364,74.8562161632879,10.5485889075764,122.21004540176,140.641550958178,206.566978728262,0.95497793895076,53.7506072307076,0.307160702099232,8.94732882989668,5.06409899077846,9.57254863196991,233.856697527772,72.2048895797738,5.77819165928102,103.882752239712,55.1732717800865,23.0104535629848,82.0975652425333,1.86623752597084,94.9009788115771,19.8713503889926,112.545921449912,5.32674390439441,52.6862803163268,23.3387679303737,5.81599647657131,5.65885398787293,45.9111735402747,92.712282946343,61.8342199973104,21.7499872630438,35.1621755202194,117.465186435258,155.070319239766,73.0855951271905,158.341305067107,226.927868377813,20.3720518737183,7.11518987889907,76.2908681585416,70.6601470960525,33.3968809417509,3.51016635446356,30.1759543947603,32.9040036497504,6.38687145581516,18.5725551030612,112.745749245761,177.002074776071,51.3902069191098,1.27600463892768,18.3195186803725,3.19820865611181,296.360564767636,146.462579216558,116.348177330109,115.053786914762,114.108394972924,115.629073426356,75.901493089674,91.5474694926981,79.1242741980101,79.8208431898232,79.4404261458747,37.6516233151239,56.7299300714748,19.3722066262313,59.8809542034953,42.1060002726483,80.9343800099594,68.3963769260733,2.29163852134302,14.4463976513782,2.34264445725339,189.388071205861,47.5465024004978,41.0298841412617,11.4429476826323,30.247679012166,59.9902612795761,18.6400409904039,49.1557581485391,105.969331607987,42.5378478532599,20.8524932201564,26.9982309830214,23.8944859545918,7.39984819677461,19.6918035678657,40.4394190320855,73.9842600478551,78.0050490960407,9.2605134168276,48.6720471894675,98.3044325897105,89.4613241134911,97.8816248074254,18.8158691987534,39.7152570111751,20.1122859294674,80.1695259183493,165.52927154859,3.03891820588218,87.6070194651917,19.6389109616258,11.7399147106644,40.3615411355903,54.0339064327897,56.9246882944601,42.2123694740433,20.167671718341,21.9926987950816,46.1960307848919,61.2927969391999,58.2637853959696,113.218021576317,28.6061084002504,14.4100869290349,11.7738625847114,98.3648728115687,45.9849022319354,115.670435882898,2.79282401272254,2.06244381610515,19.382571663574,29.5524920738507,2.57535628881943,2.4548860318606,14.98191436454,2.16179930125442,182.898640758102,106.199729750137,107.717526904185,104.610300061695,33.7606261595588,228.025283253158,14.3141344165675,6.26535668113248,292.249223909405,208.922404191198,240.124515380869,17.7729374325685,19.3450488639487,2.97672827624321,30.1891218839339,3.86147965766071,16.9952865557394,5.49121749900914,25.6380895245968,66.0188278778892,13.579211201094,11.9176554665778,152.815391130505,1.62899880526114,2.5926644736038,11.7571449639387,162.833060524983,69.8607351576875,28.6251876599508,155.464189565612,4.9827759450548,38.4269977845442,24.5637617086946,10.0496777324444,13.3447733549777,42.2889013390003,13.4552139835295,13.9911831538703,34.3818415938172,69.9594090754851,97.6201461575845,52.2490247054044,53.6206656526953,1.08803560673895,1.5041393641362,1.53172788381731,1.96723578425883,45.2315797200675,7.97461361970287,8.90791733784331,7.38626491168349,16.055457479322,13.2005571328854,4.65723022060376,185.387170814549,135.728723046848,24.4155079242053,18.5552466804229,8.70483532883235,188.738967040173,79.561644707343,23.1344944474655,6.54397267572229,17.7537875680836,3.59865710022669,2.76724691927833,6.22867855117575,0.686520205190771,9.07385542579434,26.1134496979071,27.2053475980926,18.9563152924806,3.14862178514523,19.7183955232849,11.611773819544,5.84851772027589,2.60872530905867,5.55953153289708,1.52322084867518,28.4809513243263,9.81982759693821,4.83347506691198,4.17630383890644,5.97143833047924,150.010411748683,8.58489262956982,12.1229815955731,12.6184898228651,25.8110572745786,53.1815146609816,34.9732351233383,69.1453072812431,31.2555340337176,74.1552214654597,30.8032806660158,84.3027950749454,53.2860240476258,67.3185646053807,66.7482572417365,83.2886232419648,137.601695481727,84.2850033824125,40.4133741715918,7.18943867989,71.708593652895,50.488639319078,107.135333237578,41.6064508034944,35.1455259517819,69.099064338271,146.390773765809,122.37541395918,38.9205854033443,53.3464996352826,53.9430434237893,0.699397538597222,11.8194679406265,72.1324254152595,82.1625062842715,63.692706451638,87.9137587445712,61.1037107834491,80.1407448783344,126.6623510727,140.219874411284,19.3982653898585,181.145428267879,49.6353863936991,28.5667514389454,14.6997829129536,3.98221195598049,12.7526918693026,8.46059453002902,5.53814183450038,86.4605918040493,5.11763668235212,5.49017195148294,5.71077681036618,20.2184300112113,45.1824040421846,52.2771505786785,44.3618558017299,32.036096019242,25.5433172642237,49.5301393069524,4.88867134270172,61.5200459545736,4.68908406739856,336.026289019665,58.3028026335944,39.6254311061681,3.17426647706455,10.15401528198,5.58054350553197,3.36103794027706,127.445130501245,5.48257766857182,3.47347824872506,13.3662145713312,41.6505514105081,13.9282477328355,15.1327674998471,10.3184152720227,10.4724608021597,13.748867375209,74.0954539983661,51.7893788501004,2.65081958609644,4.01213918733379,68.7888153944695,52.9461473006249,5.65150268523701,8.1700106756321,42.6013688236959,59.3553168331172,67.5853360514285,23.8875843943525,6.00402971083913,94.4921398161705,97.9915215853296,94.7527584049058,8.81882501203278,9.94637587982577,9.9016716714491,2.07377898544228,3.01159151174194,19.4064481198127,19.5990830946063,16.9354820076372,54.756541582028,13.3388745835658,58.2878752776234,48.5452574002419,70.4718677357445,63.2754030657978,0.647428837187895,5.33846595652485,52.191649410219,21.3712836946021,162.353987642701,152.993146099092,56.3681230285675,81.4341251500902,57.8287118080957,97.3710341005044,23.4609440648152,56.169807049517,65.8444214906132,2.20633489578515,43.3644846666992,37.4949172189545,19.9021088219148,22.8234092895036,27.6981196941142,29.2289984917345,34.8072595057317,78.2539250892194,13.2129914568187,11.6455307666178,13.3200668704019,40.898837741805,6.88093925106811,6.73696040811821,50.9602145883986,2.58367662725476,97.3062039459042,29.096476228347,29.0156114170066,5.54610754357702,16.8724359228278,108.250792508498,187.718252633629,277.216320213024,274.859896154641,131.20374598539,149.053527045518,153.683721586226,4.77405798774908,5.09131847296739,29.8500998205161,7.75747468964214,12.3675709502569,56.4212702569065,197.125352819491,95.0984623012543,85.6687430115887,4.26435960463705,18.5947813841562,25.0374260081506,24.9830309792255,40.81534412684,13.4837746138232,19.6269610362148,94.2649850515085,96.6949753652102,57.921684686082,9.16217061487186,18.7712753922763,3.91172621385173,42.3172025448368,2.66302709674205,39.6509373374322,59.3051710760981 | |||
|short_description=p1@LMNB1 | |||
}} |
Latest revision as of 01:37, 20 September 2015
Short description: | p1@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LMNB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261366, ENST00000395354, ENST00000472034, ENST00000492190, ENST00000504788, NM_001198557, uc003kuc.2, uc003kud.1, uc010jdb.1, uc011cxb.1_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | P20700E9PBF6B4DZT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.58e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.06e-37 | 235 |
disease of cellular proliferation | 1.51e-34 | 239 |
hematologic cancer | 1.07e-23 | 51 |
immune system cancer | 1.07e-23 | 51 |
leukemia | 1.67e-19 | 39 |
organ system cancer | 1.62e-18 | 137 |
cell type cancer | 1.04e-17 | 143 |
myeloid leukemia | 4.74e-15 | 31 |
carcinoma | 6.24e-14 | 106 |
germ cell and embryonal cancer | 5.74e-07 | 22 |
germ cell cancer | 5.74e-07 | 22 |