FFCP PHASE1:Mm9::chr16:7224501..7224510,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:7224501..7224510,+|id=chr16:7224501..7224510,+|ontology_enrichment_celltype=CL:0000540!3.29e-08!33;CL:0000047!3.29e-08!33;CL:0000031!3.29e-08!33;CL:0000404!3.29e-08!33;CL:0000117!2.27e-07!23;CL:0000337!2.27e-07!23|ontology_enrichment_celltype_v019_2=CL:0002612,1.59e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.65e-18!73;UBERON:0005743!2.65e-18!73;UBERON:0000073!1.58e-17!75;UBERON:0001016!1.58e-17!75;UBERON:0004121!2.15e-16!102;UBERON:0000924!2.15e-16!102;UBERON:0006601!2.15e-16!102;UBERON:0002020!5.74e-16!34;UBERON:0001049!1.68e-15!52;UBERON:0005068!1.68e-15!52;UBERON:0006241!1.68e-15!52;UBERON:0007135!1.68e-15!52;UBERON:0000955!1.63e-14!50;UBERON:0006238!1.63e-14!50;UBERON:0002791!5.23e-14!29;UBERON:0003528!5.23e-14!29;UBERON:0001893!5.23e-14!29;UBERON:0002346!6.30e-14!71;UBERON:0003075!6.30e-14!71;UBERON:0007284!6.30e-14!71;UBERON:0002616!1.39e-13!49;UBERON:0000033!5.09e-13!63;UBERON:0002780!6.94e-13!39;UBERON:0001890!6.94e-13!39;UBERON:0006240!6.94e-13!39;UBERON:0003080!2.11e-12!40;UBERON:0003056!5.98e-11!49;UBERON:0000956!1.04e-09!21;UBERON:0001869!1.04e-09!21;UBERON:0000203!1.04e-09!21;UBERON:0002021!1.40e-09!10;UBERON:0000411!1.40e-09!10;UBERON:0001950!1.40e-09!10;UBERON:0002619!1.17e-07!17;UBERON:0007811!2.28e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001374,5.07e-23,1;UBERON:0004252,5.07e-23,1;UBERON:0003663,5.07e-23,1;UBERON:0005090,5.07e-23,1;UBERON:0001630,5.07e-23,1;UBERON:0003661,5.07e-23,1;UBERON:0010890,5.07e-23,1;UBERON:0001383,5.07e-23,1;UBERON:0002257,1.59e-08,3;UBERON:0003076,2.45e-08,12;UBERON:0003057,2.45e-08,12;UBERON:0002037,8.08e-07,4;UBERON:0002680,8.08e-07,4;UBERON:0001895,8.08e-07,4;UBERON:0010092,8.08e-07,4;UBERON:0006215,8.08e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0.244981598429908,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0,0.52091337055676,0.279182999001381,0,0.15279824777681,1.17851434189467,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0.220841518460394,0,0,0,4.39838084308256,0,0,0,0,0,0.915001205637253,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0.420579897128254,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,1.26235463602186,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0.453142408984205,1.03552062350364,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0,0.231867835620421|short_description=p@chr16:7224501..7224510,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:7224501..7224510,+ | |||
|description=CAGE_peak_at_chr16:7224501..7224510,+ | |||
|id=chr16:7224501..7224510,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.29e-08!33;CL:0000047!3.29e-08!33;CL:0000031!3.29e-08!33;CL:0000404!3.29e-08!33;CL:0000117!2.27e-07!23;CL:0000337!2.27e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,1.59e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.65e-18!73;UBERON:0005743!2.65e-18!73;UBERON:0000073!1.58e-17!75;UBERON:0001016!1.58e-17!75;UBERON:0004121!2.15e-16!102;UBERON:0000924!2.15e-16!102;UBERON:0006601!2.15e-16!102;UBERON:0002020!5.74e-16!34;UBERON:0001049!1.68e-15!52;UBERON:0005068!1.68e-15!52;UBERON:0006241!1.68e-15!52;UBERON:0007135!1.68e-15!52;UBERON:0000955!1.63e-14!50;UBERON:0006238!1.63e-14!50;UBERON:0002791!5.23e-14!29;UBERON:0003528!5.23e-14!29;UBERON:0001893!5.23e-14!29;UBERON:0002346!6.30e-14!71;UBERON:0003075!6.30e-14!71;UBERON:0007284!6.30e-14!71;UBERON:0002616!1.39e-13!49;UBERON:0000033!5.09e-13!63;UBERON:0002780!6.94e-13!39;UBERON:0001890!6.94e-13!39;UBERON:0006240!6.94e-13!39;UBERON:0003080!2.11e-12!40;UBERON:0003056!5.98e-11!49;UBERON:0000956!1.04e-09!21;UBERON:0001869!1.04e-09!21;UBERON:0000203!1.04e-09!21;UBERON:0002021!1.40e-09!10;UBERON:0000411!1.40e-09!10;UBERON:0001950!1.40e-09!10;UBERON:0002619!1.17e-07!17;UBERON:0007811!2.28e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001374,5.07e-23,1;UBERON:0004252,5.07e-23,1;UBERON:0003663,5.07e-23,1;UBERON:0005090,5.07e-23,1;UBERON:0001630,5.07e-23,1;UBERON:0003661,5.07e-23,1;UBERON:0010890,5.07e-23,1;UBERON:0001383,5.07e-23,1;UBERON:0002257,1.59e-08,3;UBERON:0003076,2.45e-08,12;UBERON:0003057,2.45e-08,12;UBERON:0002037,8.08e-07,4;UBERON:0002680,8.08e-07,4;UBERON:0001895,8.08e-07,4;UBERON:0010092,8.08e-07,4;UBERON:0006215,8.08e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0.244981598429908,0,0,0,0.127687338085188,0.307213066512487,0.131886287730194,0,0.52091337055676,0.279182999001381,0,0.15279824777681,1.17851434189467,0.427115042397309,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0.220841518460394,0,0,0,4.39838084308256,0,0,0,0,0,0.915001205637253,0.125654352112864,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0.420579897128254,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,1.26235463602186,0,0,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0.453142408984205,1.03552062350364,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr16:7224501..7224510,+ | |||
}} |
Latest revision as of 01:21, 4 August 2015
Short description: | p@chr16:7224501..7224510, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:7224501..7224510, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
biceps femoris | 5.07e-23 | 1 |
hindlimb stylopod muscle | 5.07e-23 | 1 |
hindlimb muscle | 5.07e-23 | 1 |
muscle structure | 5.07e-23 | 1 |
muscle organ | 5.07e-23 | 1 |
limb muscle | 5.07e-23 | 1 |
pelvic complex muscle | 5.07e-23 | 1 |
muscle of leg | 5.07e-23 | 1 |
ventral horn of spinal cord | 1.59e-08 | 3 |
posterior neural tube | 2.45e-08 | 12 |
chordal neural plate | 2.45e-08 | 12 |
cerebellum | 8.08e-07 | 4 |
regional part of metencephalon | 8.08e-07 | 4 |
metencephalon | 8.08e-07 | 4 |
future metencephalon | 8.08e-07 | 4 |
rhombic lip | 8.08e-07 | 4 |