FFCP PHASE1:Hg19::chr5:132299008..132299026,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17869 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=178bp_to_ENST00000465484_5end | |||
|cluster_id=chr5:132299008..132299026,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_5_at_AFF4_5end | |||
|id=chr5:132299008..132299026,- | |||
|ontology_enrichment_celltype=CL:0002139!1.73e-09!24;CL:0000071!6.32e-08!18;CL:0002546!6.32e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.07e-10;24!CL:0000071;1.56e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.81e-10,24;CL:0000071,1.70e-08,18;CL:0002546,1.70e-08,18;CL:0000115,2.83e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.56e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!5.62e-08!22;UBERON:0001986!6.32e-08!18;UBERON:0004638!6.32e-08!18;UBERON:0004852!6.32e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;4.34e-09;22!UBERON:0004638;1.56e-08;18!UBERON:0001986;1.56e-08;18!UBERON:0004852;1.56e-08;18!UBERON:0006914;8.25e-08;25!UBERON:0000490;8.93e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000487,6.88e-09,22;UBERON:0004638,1.70e-08,18;UBERON:0001986,1.70e-08,18;UBERON:0004852,1.70e-08,18;UBERON:0006914,1.59e-07,25 | |||
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| |||
|short_description=p5@AFF4 | |||
}} |
Latest revision as of 06:32, 20 September 2015
Short description: | p5@AFF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AFF4_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 178bp_to_ENST00000465484_5end |
EntrezGene: | AFF4 |
HGNC: | 17869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.81e-10 | 24 |
blood vessel endothelial cell | 1.70e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.70e-08 | 18 |
endothelial cell | 2.83e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
simple squamous epithelium | 6.88e-09 | 22 |
blood vessel endothelium | 1.70e-08 | 18 |
endothelium | 1.70e-08 | 18 |
cardiovascular system endothelium | 1.70e-08 | 18 |
squamous epithelium | 1.59e-07 | 25 |