FFCP PHASE1:Hg19::chr5:137610263..137610273,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4245 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_ENST00000378362_5end | |||
|cluster_id=chr5:137610263..137610273,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_7_at_GFRA3_5end | |||
|id=chr5:137610263..137610273,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.82e-11;2!CL:0002567;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.82e-11,2;CL:0002567,7.26e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.56e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.87e-21;1!DOID:1357;1.87e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.88e-21,1;DOID:1357,1.88e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.73e-21!115;UBERON:0001829!8.39e-08!2;UBERON:0003135!3.21e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.87e-21;1!UBERON:0001825;1.87e-21;1!UBERON:0002426;4.66e-21;1!UBERON:0003831;4.66e-21;1!UBERON:0003898;4.66e-21;1!UBERON:0004830;4.66e-21;1!UBERON:0003830;4.66e-21;1!UBERON:0005175;4.66e-21;1!UBERON:0001774;4.66e-21;1!UBERON:0001103;4.66e-21;1!UBERON:0006955;1.82e-11;2!UBERON:0004801;1.82e-11;2!UBERON:0001905;3.18e-11;2!UBERON:0005090;3.18e-11;2!UBERON:0001630;3.18e-11;2!UBERON:0002757;3.18e-11;2!UBERON:0010134;3.18e-11;2!UBERON:0005408;3.18e-11;2!UBERON:0001899;3.18e-11;2!UBERON:0002114;6.56e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.88e-21,1;UBERON:0001825,1.88e-21,1;UBERON:0002426,2.82e-21,1;UBERON:0003831,2.82e-21,1;UBERON:0003898,2.82e-21,1;UBERON:0004830,2.82e-21,1;UBERON:0003830,2.82e-21,1;UBERON:0005175,2.82e-21,1;UBERON:0001774,2.82e-21,1;UBERON:0001103,2.82e-21,1;UBERON:0010084,2.82e-21,1;UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0001905,2.23e-11,2;UBERON:0002757,2.23e-11,2;UBERON:0010134,2.23e-11,2;UBERON:0005408,2.23e-11,2;UBERON:0001899,2.23e-11,2;UBERON:0005090,2.47e-11,2;UBERON:0001630,2.47e-11,2;UBERON:0002114,8.29e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,17.1314268540908,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,1.52581736317083,0.442317039724898,0,0,0,0,0.384751292518985,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,6.43921794625961,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,1.31051565830417,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,1.60710550763486,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.237840181555137,0.45178432815584,0,0,0.308696632431779,0.218559560503957,0.940634592723046,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0.458729283404541,0,0.157771562193185,0,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0.227336094654718,0.267964130156178,0,0,0.213233981900981,0,0.0645889098360061,0,0,0,0.202117188958219,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p7@GFRA3 | |||
}} |
Latest revision as of 22:08, 24 September 2015
Short description: | p7@GFRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GFRA3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -9bp_to_ENST00000378362_5end |
EntrezGene: | GFRA3 |
HGNC: | 4245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.82e-11 | 2 |
light melanocyte | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.88e-21 | 1 |
paranasal sinus | 1.88e-21 | 1 |
chest muscle | 2.82e-21 | 1 |
respiratory system muscle | 2.82e-21 | 1 |
skeletal muscle of trunk | 2.82e-21 | 1 |
respiratory system skeletal muscle | 2.82e-21 | 1 |
thoracic segment muscle | 2.82e-21 | 1 |
chest organ | 2.82e-21 | 1 |
muscle of trunk | 2.82e-21 | 1 |
diaphragm | 2.82e-21 | 1 |
future diaphragm | 2.82e-21 | 1 |
uterine epithelium | 1.82e-11 | 2 |
cervix epithelium | 1.82e-11 | 2 |
pineal body | 2.23e-11 | 2 |
regional part of epithalamus | 2.23e-11 | 2 |
secretory circumventricular organ | 2.23e-11 | 2 |
circumventricular organ | 2.23e-11 | 2 |
epithalamus | 2.23e-11 | 2 |
muscle structure | 2.47e-11 | 2 |
muscle organ | 2.47e-11 | 2 |
duodenum | 8.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.88e-21 | 1 |
maxillary sinus cancer | 1.88e-21 | 1 |