FFCP PHASE1:Hg19::chr5:137610300..137610332,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2676 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4245 | |||
|TSSclassifier=strong | |||
|UniProt=O60609 | |||
|association_with_transcript=27bp_to_ENST00000274721_5end | |||
|cluster_id=chr5:137610300..137610332,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_1_at_GFRA3_5end | |||
|id=chr5:137610300..137610332,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.70e-16;3!UBERON:0009117;2.60e-08;10!UBERON:0005564;2.60e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;7.87e-07;1!DOID:1357;7.87e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,7.90e-07,1;DOID:1357,7.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.87e-27!115;UBERON:0003135!9.43e-11!11;UBERON:0000473!5.62e-07!8;UBERON:0003101!9.75e-07!22;UBERON:0000079!9.75e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.40e-11;11!UBERON:0000473;2.28e-10;8!UBERON:0002037;2.91e-08;6!UBERON:0003101;1.02e-07;22!UBERON:0000079;1.02e-07;22!UBERON:0006947;1.33e-07;3!UBERON:0004054;1.33e-07;3!UBERON:0001764;7.87e-07;1!UBERON:0001825;7.87e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.37e-13,114;UBERON:0003135,2.98e-11,11;UBERON:0000473,2.41e-10,8;UBERON:0002037,2.82e-08,6;UBERON:0006215,2.82e-08,6;UBERON:0002553,8.10e-08,61;UBERON:0003101,1.23e-07,22;UBERON:0000079,1.23e-07,22;UBERON:0006947,1.25e-07,3;UBERON:0004054,1.25e-07,3;UBERON:0003133,5.49e-07,48;UBERON:0001764,7.90e-07,1;UBERON:0001825,7.90e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.530119073285941,0.464775771478074,0.310983165046111,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0.968532774145487,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.865615277858669,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.597743964753209,1.93398740871803,77.0914208434085,0,0.123084805461069,0,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,4.5774520895125,1.21637185924347,1.47773809476774,0,0,0,1.23120413606075,0,0,0.359030577639089,1.84700532267414,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,1.99052386215701,0.442287822516696,0,0,0,0,0,0,0,0,1.17398771359254,0,1.18375320854817,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.74580229679155,0,0.451961481561065,0,0,0,0,0,1.28071796843612,0,0,0,1.88754497648161,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,1.11712960508902,0.229160424011684,0,0.399358000997982,0,0.669514372325618,0.201550417460179,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0,0,0,0.321506296930038,1.2378549293751,0,0,0,0.0607495566580247,0,0.157611414598396,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.339936274560377,0,1.32506888912221,0,0,0,0,0,0.628817220398664,0,0,0,0.121792598380896,0,0,0,0,0,50.8855271850759,0,0,0,0.573409195690071,0.221858103073705,0.248385611765534,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87524419753279,2.07498312564826,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.20336525358812,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,0.496211178389294,0,0.255524855279191,1.60710550763486,0.336283722218824,0.606965604236632,0,0,0.345701962667338,0,0,0,0,0,0.863424021355654,0,0,0,0,0,0.929195074296532,0,0,0,0,0,0,0,1.29068207646083,0,0,1.69354820076372,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.485710993059139,0,0,0.237840181555137,3.72722070728568,0.329821550236287,0,0.463044948647668,0.874238242015829,5.64380755633827,0.490296643507811,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0.315543124386369,0.135982980381829,0,1.0580536810308,0,0,0,0,0.218531143927391,0,0.203977659483963,0.26721740526556,0,1.0028301571695,2.19758224832894,1.33982065078089,0,0.103432995861895,0.426467963801962,0,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.717222053926764,0.332660356546013,0.162806537221949,0.106727345877715,0,0,0,0.855690109280065,0.406896178315738,1.33151354837103,1.40891655513718,0 | |||
|short_description=p1@GFRA3 | |||
}} |
Latest revision as of 22:10, 24 September 2015
Short description: | p1@GFRA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GFRA3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 27bp_to_ENST00000274721_5end |
EntrezGene: | GFRA3 |
HGNC: | 4245 |
UniProt: | O60609 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.37e-13 | 114 |
male reproductive organ | 2.98e-11 | 11 |
testis | 2.41e-10 | 8 |
cerebellum | 2.82e-08 | 6 |
rhombic lip | 2.82e-08 | 6 |
anatomical cavity | 8.10e-08 | 61 |
male organism | 1.23e-07 | 22 |
male reproductive system | 1.23e-07 | 22 |
male genital duct | 1.25e-07 | 3 |
internal male genitalia | 1.25e-07 | 3 |
reproductive organ | 5.49e-07 | 48 |
maxillary sinus | 7.90e-07 | 1 |
paranasal sinus | 7.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 7.90e-07 | 1 |
maxillary sinus cancer | 7.90e-07 | 1 |