FFCP PHASE1:Hg19::chrX:151903196..151903211,-: Difference between revisions
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|id=chrX:151903196..151903211,-
|short_description=p1@MAGEA12
|description=CAGE_peak_1_at_MAGEA12_5end
|association_with_transcript=-12bp_to_ENST00000357916,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4111 | |EntrezGene=4111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6799 | |HGNC=6799 | ||
|TSSclassifier=strong | |||
|UniProt=P43365,Q6FHH8 | |UniProt=P43365,Q6FHH8 | ||
|association_with_transcript=-12bp_to_ENST00000357916,ENST00000393869,NM_001166387,NM_005367_5end | |||
|cluster_id=chrX:151903196..151903211,- | |||
|coexpression_cluster_id=C2956 | |||
|description=CAGE_peak_1_at_MAGEA12_5end | |||
|id=chrX:151903196..151903211,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.21e-13;29!UBERON:0001041;8.09e-07;30 | |||
|ontology_enrichment_disease=DOID:162!5.06e-27!235;DOID:14566!3.83e-26!239;DOID:0050687!4.93e-24!143;DOID:305!6.53e-18!106;DOID:0050686!4.11e-11!137;DOID:1115!1.31e-07!20;DOID:0050615!2.10e-07!16;DOID:201!3.40e-07!6;DOID:0060100!3.40e-07!6;DOID:5409!5.60e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;4.62e-11;4!DOID:1325;7.77e-11;7!DOID:3904;7.77e-11;7!DOID:1036;8.57e-10;8!DOID:3905;1.94e-08;9!DOID:0050687;6.11e-08;143!DOID:1115;6.75e-08;20!DOID:1324;1.27e-07;15!DOID:0050615;4.00e-07;16!DOID:305;5.29e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.46e-22,235;DOID:14566,6.35e-22,239;DOID:0050687,1.13e-19,143;DOID:305,5.24e-15,106;DOID:0050686,5.72e-12,137;DOID:5409,5.49e-11,4;DOID:1325,1.03e-10,7;DOID:3904,1.03e-10,7;DOID:1036,6.78e-10,8;DOID:3905,2.41e-08,9;DOID:1115,6.11e-08,20;DOID:1324,1.49e-07,15;DOID:0050615,4.64e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.77e-21!9;UBERON:0008947!6.21e-12!38;UBERON:0003258!6.21e-12!38;UBERON:0001557!3.12e-09!19;UBERON:0000072!3.18e-09!46;UBERON:0000065!1.52e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.49e-12;9!UBERON:0001557;7.49e-12;9!UBERON:0000072;2.02e-09;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.18e-11,9;UBERON:0008947,7.93e-10,38;UBERON:0003258,7.93e-10,38;UBERON:0000072,1.34e-07,47 | |||
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| ||
|short_description=p1@MAGEA12 | |||
}} | }} |
Latest revision as of 22:58, 19 September 2015
Short description: | p1@MAGEA12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAGEA12_5end |
Coexpression cluster: | C2956_endometrial_nonsmall_cholangiocellular_liposarcoma_lymphangiectasia_medulloblastoma_melanoma |
Association with transcript: | -12bp_to_ENST00000357916, ENST00000393869, NM_001166387, NM_005367_5end |
EntrezGene: | MAGEA12 |
HGNC: | 6799 |
UniProt: | P43365Q6FHH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.18e-11 | 9 |
respiratory primordium | 7.93e-10 | 38 |
endoderm of foregut | 7.93e-10 | 38 |
segment of respiratory tract | 1.34e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.46e-22 | 235 |
disease of cellular proliferation | 6.35e-22 | 239 |
cell type cancer | 1.13e-19 | 143 |
carcinoma | 5.24e-15 | 106 |
organ system cancer | 5.72e-12 | 137 |
lung small cell carcinoma | 5.49e-11 | 4 |
bronchus cancer | 1.03e-10 | 7 |
bronchogenic carcinoma | 1.03e-10 | 7 |
chronic leukemia | 6.78e-10 | 8 |
lung carcinoma | 2.41e-08 | 9 |
sarcoma | 6.11e-08 | 20 |
lung cancer | 1.49e-07 | 15 |
respiratory system cancer | 4.64e-07 | 16 |