FFCP PHASE1:Hg19::chr5:153854814..153854825,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:153854814..153854825,- | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr5:153854814..153854825,- | |||
|id=chr5:153854814..153854825,- | |||
|ontology_enrichment_celltype=CL:0002536!9.31e-12!2;CL:0002537!1.95e-10!5;CL:0000349!1.87e-08!3;CL:0002577!1.87e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.42e-27;19!CL:0002537;4.29e-26;5!CL:0002577;2.05e-20;3!CL:0000333;2.59e-12;5!CL:0002321;4.49e-09;15!CL:0002536;1.61e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.43e-27,19;CL:0002537,4.29e-26,5;CL:0002577,2.05e-20,3;CL:0002536,1.61e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!2.41e-11!2;DOID:3095!8.29e-11!22;DOID:2994!8.29e-11!22;DOID:171!1.36e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:169;2.04e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,2.41e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.38e-29!14;UBERON:0000158!1.38e-29!14;UBERON:0000305!2.86e-19!7;UBERON:0004871!7.82e-17!8;UBERON:0000478!1.34e-16!24;UBERON:0001987!1.17e-12!4;UBERON:0004340!1.17e-12!4;UBERON:0003124!2.17e-12!7;UBERON:0004923!7.27e-11!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.05e-32;7!UBERON:0005631;4.98e-23;10!UBERON:0000158;4.98e-23;10!UBERON:0000478;3.12e-21;24!UBERON:0001987;1.44e-15;4!UBERON:0000013;2.59e-12;5!UBERON:0002410;2.59e-12;5!UBERON:0000010;3.09e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.77e-36,14;UBERON:0000158,1.77e-36,14;UBERON:0000305,1.05e-32,7;UBERON:0004871,1.12e-28,8;UBERON:0000478,3.12e-21,24;UBERON:0001987,1.44e-15,4;UBERON:0004340,1.44e-15,4;UBERON:0000013,3.16e-12,5;UBERON:0002410,3.16e-12,5;UBERON:0003124,2.69e-09,7;UBERON:0004923,1.50e-07,66;UBERON:0000010,3.45e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.71350332621293,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85910308591229,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36567900037145,0,7.25736703991233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,3.8605408508243,2.45728561679386,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.964518890790115,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,2.034148301238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15104934173287,0,0,3.05786986937639,0,0.212574920101683,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.874124575709564,5.44803554349179,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:153854814..153854825,- | |||
}} |
Latest revision as of 12:09, 30 July 2015
Short description: | p@chr5:153854814..153854825, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:153854814..153854825, - |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.43e-27 | 19 |
amnion mesenchymal stem cell | 4.29e-26 | 5 |
placental epithelial cell | 2.05e-20 | 3 |
amniotic epithelial cell | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.77e-36 | 14 |
membranous layer | 1.77e-36 | 14 |
amnion | 1.05e-32 | 7 |
somatic layer of lateral plate mesoderm | 1.12e-28 | 8 |
extraembryonic structure | 3.12e-21 | 24 |
placenta | 1.44e-15 | 4 |
allantois | 1.44e-15 | 4 |
sympathetic nervous system | 3.16e-12 | 5 |
autonomic nervous system | 3.16e-12 | 5 |
chorion | 2.69e-09 | 7 |
organ component layer | 1.50e-07 | 66 |
peripheral nervous system | 3.45e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.41e-10 | 6 |