FFCP PHASE1:Mm9::chr17:45736553..45736572,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=63959|HGNC=|MCL_coexpression_id=8|UniProt=E9PXQ6,E9Q3D1|association_with_transcript=0bp_to_ENSMUST00000166633,ENSMUST00000169729_5end|description=CAGE_peak_3_at_Slc29a1_5end|id=chr17:45736553..45736572,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!7.03e-11!25;UBERON:0002330!7.03e-11!25;UBERON:0009854!5.78e-10!23;UBERON:0009856!5.78e-10!23;UBERON:0002107!2.04e-09!22;UBERON:0007499!2.04e-09!22;UBERON:0006925!2.04e-09!22;UBERON:0009497!2.04e-09!22;UBERON:0000015!2.04e-09!22;UBERON:0002423!2.04e-09!22;UBERON:0006235!2.04e-09!22;UBERON:0008835!2.04e-09!22;UBERON:0003894!2.04e-09!22;UBERON:0004161!2.04e-09!22;UBERON:0008836!2.04e-09!22;UBERON:0005177!6.37e-09!85;UBERON:0005172!1.34e-08!49;UBERON:0005173!1.34e-08!49;UBERON:0002417!1.34e-08!49;UBERON:0000916!1.34e-08!49;UBERON:0009569!2.70e-07!66;UBERON:0000466!2.78e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.47e-12,25;UBERON:0002330,5.47e-12,25;UBERON:0003104,2.73e-11,61;UBERON:0009142,2.73e-11,61;UBERON:0009854,8.31e-11,23;UBERON:0009856,8.31e-11,23;UBERON:0002107,4.15e-10,22;UBERON:0007499,4.15e-10,22;UBERON:0006925,4.15e-10,22;UBERON:0009497,4.15e-10,22;UBERON:0000015,4.15e-10,22;UBERON:0002423,4.15e-10,22;UBERON:0006235,4.15e-10,22;UBERON:0008835,4.15e-10,22;UBERON:0003894,4.15e-10,22;UBERON:0004161,4.15e-10,22;UBERON:0008836,4.15e-10,22;UBERON:0005177,4.80e-10,79;UBERON:0005172,1.44e-09,49;UBERON:0005173,1.44e-09,49;UBERON:0002417,1.44e-09,49;UBERON:0000916,1.44e-09,49;UBERON:0002100,1.00e-07,90;UBERON:0005256,4.00e-07,45|phase1_expression=2.40223270657191,0,0,0,0,2.18243053485457,3.50418960893289,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,1.78590909317247,0,0,0.799962113967033,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,1.14014051673824,1.51218077855958,1.77384408524244,0.635030673459631,0,0,2.02196133825892,1.99481574430191,2.04169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,1.74420125104357,1.09843091367236,0,1.25987779462826,7.18762821824858,0,0,0,0,0.286533439938757,0,0,0,0,0.677689064138264,0.889294796111139,1.3498495759221,0,4.2628806896766,3.29560121570245,2.68952813725088,0.103689612308478,0,0.210324961351382,0.285650984403804,0.662605622854841,0,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0,0,0,0,0.15279824777681,0.294628585473668,0,0.186399445825301,0,0,0.869593466105033,15.487629785665,29.918738683141,74.4790404460188,48.7332313085752,58.691522209751,11.3759980306719,0,0,0,5.91542363062058,0,0,0,2.16491041011214,2.78695852022608,2.52762222507392,27.9750505311697,0,4.15637989381509,0.173485326766136,0.608930956624282,0.922461989024234,1.20578112442098,2.70454026412121,3.89566433121994,1.23597483867187,0,1.76922110389975,2.58826959915855,1.98757366614354,1.45462575940567,5.59175283654366,0.292780797011547,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,3.79084137650512,3.99839526184301,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0.268273401399619,0.233530684734339,0.493679549740441,1.14917224855367,1.37816976227955,0.877199924551994,1.09775057645525,0.671032093801859,0,0.102904612379284,0,0.793351699990633,0,0.232236671860439,0.644337306610467,0.80673409849337,0.667134131534611,2.28270751335071,0.474529061544512,1.64698954724011,0.754005626400808,2.18852119245266,0.974820435595601,1.79763881730844,1.72910439899755,2.78797782556114,0.569003702859245,1.25673363870702,1.1270773567308,2.24016460629846,1.74557238450863,2.03393877681924,1.96033265085198,1.47610147979602,2.511979645462,1.85095745882701,21.0481365231876,0,0.196558995113203,0.674586337154561,0.811440485554012,1.68824011826692,2.5462585178142,11.5078454980324,25.6173658304556,14.8263163121564,17.2521847832825,20.8398930694362,19.9704110793319,26.5207821844467,21.8864844496733,33.2886029740723,0.554259570499814,0,0.325929952884052,0,0.234690248288502,0.837531287209079,0.952174563544055,0.585400943573396,0,0.8858587585951,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,0,0,4.42587845717133,2.48343071674259,0,0,0,4.54447668967871,0.631016438832513,0.390438744296638,0,0,0,0.566153061577665,0,0.292255857911312,0,0.321321316421807,0.567760340833074,1.06839362200353,0.488660878060728,0.494910368917606,0,0,1.81394134178851,1.69744571780308,5.31543407185391,6.45613810682248,5.94385074286909,4.72593848320757,2.49548164869305,4.10847785316561,4.21674434299995,3.09406629744561,8.17055053809091,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,1.07021290561242,2.46823530903181,8.82948352432338,3.52007562095566,1.69465656691056,7.49796553386871,0.49465875882444,0.968786560175433,0.663442174209714,0.596861720015682,0.328281799490123,0.291480836629851,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.432021363287205,0.836353184057875,0.218362563746178,1.61837215661785,2.23164330458407,0.785267825952089,2.59229946583586,8.69875038321696,4.50954350947352,0.149516546043979,0.496375471371293,0,0,0.506868376472335,0.234714477291508,0.39061315453185,1.67774951081137,3.38217769156408,4.32045009386798,0.316011120628178,0.405450430580328,0.205421914329655,0.389762468933385,0.358053391334963,0,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0.302478555410522,0.292373642219257,0.577271049841977,0.233753804363138,3.85441652145859,0.221985953374065,0.538283139656854,0.335769232728157,5.60249822693352,1.31377732815827,0.183151624267265,0,4.51414893631827,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,2.44471400581777,1.64828045791115,0.64183841918363,2.02157769411038,2.02783439912192,2.45214243801899,1.40462261204824,1.72867911493147,1.7230640686684,1.90517476513229,2.0859178670074,2.12200142510076,3.29668720642645,2.50238164228475,2.05721551431249,1.24233064311536,1.1921809497366,0.872078499793971,2.35273451038327,1.52306294205018,2.19513567447327,1.8414879800649,1.08643291076689,3.36685362994643,1.42362021749009,1.47756723563345,2.45538625901814,2.32405261778949,0.192906610981141,0.999242311751784,3.74290573512653,2.36358159453128,3.25190164517034,3.75005412503176,3.70988536992674|short_description=p3@Slc29a1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=63959 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=E9PXQ6,E9Q3D1 | |||
|association_with_transcript=0bp_to_ENSMUST00000166633,ENSMUST00000169729_5end | |||
|cluster_id=chr17:45736553..45736572,- | |||
|description=CAGE_peak_3_at_Slc29a1_5end | |||
|id=chr17:45736553..45736572,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!7.03e-11!25;UBERON:0002330!7.03e-11!25;UBERON:0009854!5.78e-10!23;UBERON:0009856!5.78e-10!23;UBERON:0002107!2.04e-09!22;UBERON:0007499!2.04e-09!22;UBERON:0006925!2.04e-09!22;UBERON:0009497!2.04e-09!22;UBERON:0000015!2.04e-09!22;UBERON:0002423!2.04e-09!22;UBERON:0006235!2.04e-09!22;UBERON:0008835!2.04e-09!22;UBERON:0003894!2.04e-09!22;UBERON:0004161!2.04e-09!22;UBERON:0008836!2.04e-09!22;UBERON:0005177!6.37e-09!85;UBERON:0005172!1.34e-08!49;UBERON:0005173!1.34e-08!49;UBERON:0002417!1.34e-08!49;UBERON:0000916!1.34e-08!49;UBERON:0009569!2.70e-07!66;UBERON:0000466!2.78e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.47e-12,25;UBERON:0002330,5.47e-12,25;UBERON:0003104,2.73e-11,61;UBERON:0009142,2.73e-11,61;UBERON:0009854,8.31e-11,23;UBERON:0009856,8.31e-11,23;UBERON:0002107,4.15e-10,22;UBERON:0007499,4.15e-10,22;UBERON:0006925,4.15e-10,22;UBERON:0009497,4.15e-10,22;UBERON:0000015,4.15e-10,22;UBERON:0002423,4.15e-10,22;UBERON:0006235,4.15e-10,22;UBERON:0008835,4.15e-10,22;UBERON:0003894,4.15e-10,22;UBERON:0004161,4.15e-10,22;UBERON:0008836,4.15e-10,22;UBERON:0005177,4.80e-10,79;UBERON:0005172,1.44e-09,49;UBERON:0005173,1.44e-09,49;UBERON:0002417,1.44e-09,49;UBERON:0000916,1.44e-09,49;UBERON:0002100,1.00e-07,90;UBERON:0005256,4.00e-07,45 | |||
|phase1_expression=2.40223270657191,0,0,0,0,2.18243053485457,3.50418960893289,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,1.78590909317247,0,0,0.799962113967033,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,1.14014051673824,1.51218077855958,1.77384408524244,0.635030673459631,0,0,2.02196133825892,1.99481574430191,2.04169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,1.74420125104357,1.09843091367236,0,1.25987779462826,7.18762821824858,0,0,0,0,0.286533439938757,0,0,0,0,0.677689064138264,0.889294796111139,1.3498495759221,0,4.2628806896766,3.29560121570245,2.68952813725088,0.103689612308478,0,0.210324961351382,0.285650984403804,0.662605622854841,0,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0,0,0,0,0.15279824777681,0.294628585473668,0,0.186399445825301,0,0,0.869593466105033,15.487629785665,29.918738683141,74.4790404460188,48.7332313085752,58.691522209751,11.3759980306719,0,0,0,5.91542363062058,0,0,0,2.16491041011214,2.78695852022608,2.52762222507392,27.9750505311697,0,4.15637989381509,0.173485326766136,0.608930956624282,0.922461989024234,1.20578112442098,2.70454026412121,3.89566433121994,1.23597483867187,0,1.76922110389975,2.58826959915855,1.98757366614354,1.45462575940567,5.59175283654366,0.292780797011547,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,1.36847667671102,3.79084137650512,3.99839526184301,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0.268273401399619,0.233530684734339,0.493679549740441,1.14917224855367,1.37816976227955,0.877199924551994,1.09775057645525,0.671032093801859,0,0.102904612379284,0,0.793351699990633,0,0.232236671860439,0.644337306610467,0.80673409849337,0.667134131534611,2.28270751335071,0.474529061544512,1.64698954724011,0.754005626400808,2.18852119245266,0.974820435595601,1.79763881730844,1.72910439899755,2.78797782556114,0.569003702859245,1.25673363870702,1.1270773567308,2.24016460629846,1.74557238450863,2.03393877681924,1.96033265085198,1.47610147979602,2.511979645462,1.85095745882701,21.0481365231876,0,0.196558995113203,0.674586337154561,0.811440485554012,1.68824011826692,2.5462585178142,11.5078454980324,25.6173658304556,14.8263163121564,17.2521847832825,20.8398930694362,19.9704110793319,26.5207821844467,21.8864844496733,33.2886029740723,0.554259570499814,0,0.325929952884052,0,0.234690248288502,0.837531287209079,0.952174563544055,0.585400943573396,0,0.8858587585951,0.159454768657487,0.491589944147214,0.690739927463582,0.289298117163023,0,0,4.42587845717133,2.48343071674259,0,0,0,4.54447668967871,0.631016438832513,0.390438744296638,0,0,0,0.566153061577665,0,0.292255857911312,0,0.321321316421807,0.567760340833074,1.06839362200353,0.488660878060728,0.494910368917606,0,0,1.81394134178851,1.69744571780308,5.31543407185391,6.45613810682248,5.94385074286909,4.72593848320757,2.49548164869305,4.10847785316561,4.21674434299995,3.09406629744561,8.17055053809091,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,1.07021290561242,2.46823530903181,8.82948352432338,3.52007562095566,1.69465656691056,7.49796553386871,0.49465875882444,0.968786560175433,0.663442174209714,0.596861720015682,0.328281799490123,0.291480836629851,0,0,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0.158167996790568,0.813277868507395,0.432021363287205,0.836353184057875,0.218362563746178,1.61837215661785,2.23164330458407,0.785267825952089,2.59229946583586,8.69875038321696,4.50954350947352,0.149516546043979,0.496375471371293,0,0,0.506868376472335,0.234714477291508,0.39061315453185,1.67774951081137,3.38217769156408,4.32045009386798,0.316011120628178,0.405450430580328,0.205421914329655,0.389762468933385,0.358053391334963,0,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0.302478555410522,0.292373642219257,0.577271049841977,0.233753804363138,3.85441652145859,0.221985953374065,0.538283139656854,0.335769232728157,5.60249822693352,1.31377732815827,0.183151624267265,0,4.51414893631827,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,2.44471400581777,1.64828045791115,0.64183841918363,2.02157769411038,2.02783439912192,2.45214243801899,1.40462261204824,1.72867911493147,1.7230640686684,1.90517476513229,2.0859178670074,2.12200142510076,3.29668720642645,2.50238164228475,2.05721551431249,1.24233064311536,1.1921809497366,0.872078499793971,2.35273451038327,1.52306294205018,2.19513567447327,1.8414879800649,1.08643291076689,3.36685362994643,1.42362021749009,1.47756723563345,2.45538625901814,2.32405261778949,0.192906610981141,0.999242311751784,3.74290573512653,2.36358159453128,3.25190164517034,3.75005412503176,3.70988536992674 | |||
|short_description=p3@Slc29a1 | |||
}} |
Latest revision as of 13:09, 26 September 2015
Short description: | p3@Slc29a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc29a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000166633, ENSMUST00000169729_5end |
EntrezGene: | Slc29a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 5.47e-12 | 25 |
exocrine system | 5.47e-12 | 25 |
mesenchyme | 2.73e-11 | 61 |
entire embryonic mesenchyme | 2.73e-11 | 61 |
digestive tract diverticulum | 8.31e-11 | 23 |
sac | 8.31e-11 | 23 |
liver | 4.15e-10 | 22 |
epithelial sac | 4.15e-10 | 22 |
digestive gland | 4.15e-10 | 22 |
epithelium of foregut-midgut junction | 4.15e-10 | 22 |
anatomical boundary | 4.15e-10 | 22 |
hepatobiliary system | 4.15e-10 | 22 |
foregut-midgut junction | 4.15e-10 | 22 |
hepatic diverticulum | 4.15e-10 | 22 |
liver primordium | 4.15e-10 | 22 |
septum transversum | 4.15e-10 | 22 |
liver bud | 4.15e-10 | 22 |
trunk region element | 4.80e-10 | 79 |
abdomen element | 1.44e-09 | 49 |
abdominal segment element | 1.44e-09 | 49 |
abdominal segment of trunk | 1.44e-09 | 49 |
abdomen | 1.44e-09 | 49 |
trunk | 1.00e-07 | 90 |
trunk mesenchyme | 4.00e-07 | 45 |