FFCP PHASE1:Mm9::chr17:46693107..46693137,-: Difference between revisions
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{{FFCP|EntrezGene=20807|HGNC=|UniProt=Q9JM73|association_with_transcript=0bp_to_ENSMUST00000015749,NM_020493,uc008ctg.1_5end|description=CAGE_peak_1_at_Srf_5end|id=chr17:46693107..46693137,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.32e-10!18;UBERON:0000948!1.32e-10!18;UBERON:0005498!1.32e-10!18;UBERON:0004140!1.32e-10!18;UBERON:0009881!1.32e-10!18;UBERON:0004141!1.32e-10!18;UBERON:0003084!1.32e-10!18;UBERON:0007005!1.32e-10!18;UBERON:0004139!1.32e-10!18;UBERON:0004291!1.32e-10!18;UBERON:0004535!6.19e-09!23;UBERON:0001009!6.19e-09!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.32e-10,18;UBERON:0000948,1.32e-10,18;UBERON:0005498,1.32e-10,18;UBERON:0004140,1.32e-10,18;UBERON:0009881,1.32e-10,18;UBERON:0004141,1.32e-10,18;UBERON:0003084,1.32e-10,18;UBERON:0007005,1.32e-10,18;UBERON:0004139,1.32e-10,18;UBERON:0004291,1.32e-10,18;UBERON:0004535,6.19e-09,23;UBERON:0001009,6.19e-09,23|phase1_expression=9.28863313207805,10.4692622291808,9.55498402718026,11.4936400296595,20.0358291978539,24.8461322429597,22.4268134971705,10.975482492534,17.5985902689583,20.1295492636914,13.0125655851384,14.0398999831792,13.5248576645653,15.2111500209055,2.99798785634096,2.22722794128809,1.39912375625629,5.8360500591274,8.08975158273859,6.36584477697045,6.88850650223665,2.48227378002213,2.08959831311148,2.71987118748791,2.52350209173887,9.76194338995534,5.1691439539089,10.1271479362368,4.75058548640935,3.2763916868791,3.54768817048488,15.8757668364908,20.9122027778754,0,3.75507105676657,4.65457007003779,4.28755648150975,5.02237956884289,3.906676722619,4.71171369576418,9.41170380849623,8.19654581950135,6.311634589405,10.5753327099485,7.90740063512214,6.60768307782054,26.6013057078333,6.1047043786525,9.22681967484782,7.77719596297134,8.11921245427103,8.62515386189829,6.37573903019398,19.5847778343063,16.1325023588383,13.1202312378333,7.44986943840768,12.3761302146586,4.85559506063035,4.23192783417626,8.87363964908651,27.7852516296688,13.3394219416671,12.1486461832989,5.93319817540185,9.2362414942993,8.38880309451533,10.7581125490035,6.42875596312561,7.02030879324791,5.67877395648731,5.42736870367227,3.09215957332259,7.10446635446733,6.80502844229478,10.1114066527102,6.60695285996332,3.95830748064082,3.99376986466233,5.27545150920775,4.94033275453012,6.25096044668112,3.35019598801657,3.37657566019008,4.73674568108111,3.53554302568401,4.12877874317399,2.79599168737951,3.25622631332691,3.17400552448499,9.85539261585705,6.88339101585109,27.19885334831,1.61910957491345,0.649776417447669,0.896053774194671,11.5164424508037,13.9752864514007,15.0675882669664,15.9002808529653,13.661811718338,8.98285341900225,7.64415719119937,21.3320010945999,2.81438353314578,5.06719730950197,2.02209778005913,4.33898742932428,4.14300613835475,8.60964406575984,6.07198643681475,5.78484408793068,6.45723392316964,4.52167921657868,3.41007250693544,6.78599593180248,7.66304399976559,7.37456720291549,15.0383793831479,19.4120219936891,11.4837589599405,5.33362778448744,3.72783522436244,2.92780797011547,2.72280718857492,6.38642638021478,4.07371423320129,6.59893004092748,4.57452817463033,4.19413790333504,10.0650132620098,13.6963243803022,10.7771078519211,8.95004100656157,4.1557608911912,8.27430441645564,8.45266719957625,5.22509276562391,3.0326731012041,3.15662783829711,4.94457683258274,5.9774547152703,5.76198815377118,5.57607825992146,4.83059143974428,2.43416068541215,5.43470002446427,4.65666067330228,8.40715172438085,9.07709184805532,7.03804496655795,13.3709396780821,6.95118123063995,12.537077994798,8.43706759272568,6.36909653819178,7.72434506044558,7.20574139921202,8.24074148247219,31.8973689704673,21.5763975182609,24.128316235776,30.7768156260773,28.5308136033736,31.6247581419125,32.0896843755563,43.4602910267383,27.3230901139177,39.6589238291488,23.9684497555479,27.7255328646827,37.1347968060344,32.4934170630755,23.0835040267839,11.7762371195911,5.55684906848136,3.30418782983798,7.1401652999157,10.4511242762265,16.2565670302307,13.4022159774977,12.9077455758939,8.67274370994994,10.4624094361908,10.9141684155238,9.55253937399263,6.53471542880701,9.35095418593409,13.062593836981,5.39291645192533,6.91641759599022,5.17767310461355,11.3800740571849,7.19765629441292,10.1436962105772,6.92414514674068,7.37019451236978,7.22398944870281,4.48979413582227,5.46157547524528,3.29697328466887,2.34454611451421,2.07516838961004,6.84064933435986,5.50365186316968,5.8464149220062,6.08580364165509,3.61765739628625,3.8193877767213,5.4662266115654,2.43202840162553,3.56929837144506,2.87536413054709,4.09355042435354,2.18426371180192,1.26289438973556,2.51156378930677,3.37710464954357,9.42241269849684,11.3694847062291,17.2742875028547,12.3913912615887,12.4385831592906,9.21284415929987,12.6163129669587,12.8788207586147,7.72412206120336,8.858587585951,9.08892181347676,8.84861899464985,9.49767400262426,7.23245292907558,1.50791283939272,2.17562273527484,9.83528546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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20807 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9JM73 | |||
|association_with_transcript=0bp_to_ENSMUST00000015749,NM_020493,uc008ctg.1_5end | |||
|cluster_id=chr17:46693107..46693137,- | |||
|description=CAGE_peak_1_at_Srf_5end | |||
|id=chr17:46693107..46693137,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.32e-10!18;UBERON:0000948!1.32e-10!18;UBERON:0005498!1.32e-10!18;UBERON:0004140!1.32e-10!18;UBERON:0009881!1.32e-10!18;UBERON:0004141!1.32e-10!18;UBERON:0003084!1.32e-10!18;UBERON:0007005!1.32e-10!18;UBERON:0004139!1.32e-10!18;UBERON:0004291!1.32e-10!18;UBERON:0004535!6.19e-09!23;UBERON:0001009!6.19e-09!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.32e-10,18;UBERON:0000948,1.32e-10,18;UBERON:0005498,1.32e-10,18;UBERON:0004140,1.32e-10,18;UBERON:0009881,1.32e-10,18;UBERON:0004141,1.32e-10,18;UBERON:0003084,1.32e-10,18;UBERON:0007005,1.32e-10,18;UBERON:0004139,1.32e-10,18;UBERON:0004291,1.32e-10,18;UBERON:0004535,6.19e-09,23;UBERON:0001009,6.19e-09,23 | |||
|phase1_expression=9.28863313207805,10.4692622291808,9.55498402718026,11.4936400296595,20.0358291978539,24.8461322429597,22.4268134971705,10.975482492534,17.5985902689583,20.1295492636914,13.0125655851384,14.0398999831792,13.5248576645653,15.2111500209055,2.99798785634096,2.22722794128809,1.39912375625629,5.8360500591274,8.08975158273859,6.36584477697045,6.88850650223665,2.48227378002213,2.08959831311148,2.71987118748791,2.52350209173887,9.76194338995534,5.1691439539089,10.1271479362368,4.75058548640935,3.2763916868791,3.54768817048488,15.8757668364908,20.9122027778754,0,3.75507105676657,4.65457007003779,4.28755648150975,5.02237956884289,3.906676722619,4.71171369576418,9.41170380849623,8.19654581950135,6.311634589405,10.5753327099485,7.90740063512214,6.60768307782054,26.6013057078333,6.1047043786525,9.22681967484782,7.77719596297134,8.11921245427103,8.62515386189829,6.37573903019398,19.5847778343063,16.1325023588383,13.1202312378333,7.44986943840768,12.3761302146586,4.85559506063035,4.23192783417626,8.87363964908651,27.7852516296688,13.3394219416671,12.1486461832989,5.93319817540185,9.2362414942993,8.38880309451533,10.7581125490035,6.42875596312561,7.02030879324791,5.67877395648731,5.42736870367227,3.09215957332259,7.10446635446733,6.80502844229478,10.1114066527102,6.60695285996332,3.95830748064082,3.99376986466233,5.27545150920775,4.94033275453012,6.25096044668112,3.35019598801657,3.37657566019008,4.73674568108111,3.53554302568401,4.12877874317399,2.79599168737951,3.25622631332691,3.17400552448499,9.85539261585705,6.88339101585109,27.19885334831,1.61910957491345,0.649776417447669,0.896053774194671,11.5164424508037,13.9752864514007,15.0675882669664,15.9002808529653,13.661811718338,8.98285341900225,7.64415719119937,21.3320010945999,2.81438353314578,5.06719730950197,2.02209778005913,4.33898742932428,4.14300613835475,8.60964406575984,6.07198643681475,5.78484408793068,6.45723392316964,4.52167921657868,3.41007250693544,6.78599593180248,7.66304399976559,7.37456720291549,15.0383793831479,19.4120219936891,11.4837589599405,5.33362778448744,3.72783522436244,2.92780797011547,2.72280718857492,6.38642638021478,4.07371423320129,6.59893004092748,4.57452817463033,4.19413790333504,10.0650132620098,13.6963243803022,10.7771078519211,8.95004100656157,4.1557608911912,8.27430441645564,8.45266719957625,5.22509276562391,3.0326731012041,3.15662783829711,4.94457683258274,5.9774547152703,5.76198815377118,5.57607825992146,4.83059143974428,2.43416068541215,5.43470002446427,4.65666067330228,8.40715172438085,9.07709184805532,7.03804496655795,13.3709396780821,6.95118123063995,12.537077994798,8.43706759272568,6.36909653819178,7.72434506044558,7.20574139921202,8.24074148247219,31.8973689704673,21.5763975182609,24.128316235776,30.7768156260773,28.5308136033736,31.6247581419125,32.0896843755563,43.4602910267383,27.3230901139177,39.6589238291488,23.9684497555479,27.7255328646827,37.1347968060344,32.4934170630755,23.0835040267839,11.7762371195911,5.55684906848136,3.30418782983798,7.1401652999157,10.4511242762265,16.2565670302307,13.4022159774977,12.9077455758939,8.67274370994994,10.4624094361908,10.9141684155238,9.55253937399263,6.53471542880701,9.35095418593409,13.062593836981,5.39291645192533,6.91641759599022,5.17767310461355,11.3800740571849,7.19765629441292,10.1436962105772,6.92414514674068,7.37019451236978,7.22398944870281,4.48979413582227,5.46157547524528,3.29697328466887,2.34454611451421,2.07516838961004,6.84064933435986,5.50365186316968,5.8464149220062,6.08580364165509,3.61765739628625,3.8193877767213,5.4662266115654,2.43202840162553,3.56929837144506,2.87536413054709,4.09355042435354,2.18426371180192,1.26289438973556,2.51156378930677,3.37710464954357,9.42241269849684,11.3694847062291,17.2742875028547,12.3913912615887,12.4385831592906,9.21284415929987,12.6163129669587,12.8788207586147,7.72412206120336,8.858587585951,9.08892181347676,8.84861899464985,9.49767400262426,7.23245292907558,1.50791283939272,2.17562273527484,9.83528546038072,7.17435540392304,2.88991061978026,3.6335622843583,10.6557714494839,21.4600288123717,4.41711507182759,4.68526493155966,3.44677436372478,4.06246956519338,6.01556420022464,5.94460714656548,6.8817819284732,3.79932615284705,3.16230222357219,7.06906896127976,10.7874464758284,8.01295216502649,6.18970445543589,21.6110861094021,3.98235415019888,6.06951590387454,9.97667737983678,4.90373207365335,7.67784921490009,7.37844355065426,5.94385074286909,4.36240475373007,4.9909632973861,6.95280867458795,10.5418608574999,5.15677716240934,4.08527526904546,5.04171063287669,4.39819524861365,4.71541477069503,4.07882537377229,4.45922044005176,3.78462747384878,3.65357938937519,15.4883327322049,10.1679394014634,8.15955072803359,12.696241476494,7.42736362801165,10.6150747873554,7.75920236020387,7.87876318776294,7.86998258900597,4.26478194624172,5.46786818553129,7.84270098260245,7.03739204004904,4.33247451110789,5.19438065339896,5.0331198105435,4.75939603982795,3.21888340344413,4.97519905695926,6.68269432610579,18.1893196309153,11.385890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| |||
|short_description=p1@Srf | |||
}} |
Latest revision as of 13:42, 26 September 2015
Short description: | p1@Srf |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Srf_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000015749, NM_020493, uc008ctg.1_5end |
EntrezGene: | Srf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.32e-10 | 18 |
heart | 1.32e-10 | 18 |
primitive heart tube | 1.32e-10 | 18 |
primary heart field | 1.32e-10 | 18 |
anterior lateral plate mesoderm | 1.32e-10 | 18 |
heart tube | 1.32e-10 | 18 |
heart primordium | 1.32e-10 | 18 |
cardiac mesoderm | 1.32e-10 | 18 |
cardiogenic plate | 1.32e-10 | 18 |
heart rudiment | 1.32e-10 | 18 |
cardiovascular system | 6.19e-09 | 23 |
circulatory system | 6.19e-09 | 23 |