FFCP PHASE1:Mm9::chr17:64660640..64660669,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:64660640..64660669,-|id=chr17:64660640..64660669,-|ontology_enrichment_celltype=CL:0000107!8.89e-09!9;CL:0000540!3.25e-07!33;CL:0000047!3.25e-07!33;CL:0000031!3.25e-07!33;CL:0000404!3.25e-07!33|ontology_enrichment_celltype_v019_2=CL:0000107,8.53e-48,9;CL:0000540,1.30e-29,33;CL:0000047,1.30e-29,33;CL:0000031,1.30e-29,33;CL:0000404,1.30e-29,33;CL:0000221,4.44e-25,44;CL:0000133,4.44e-25,44;CL:0000393,8.83e-25,39;CL:0000211,8.83e-25,39;CL:0002319,2.64e-22,43;CL:0002610,8.08e-16,3;CL:0002321,4.91e-15,70;CL:0000723,1.66e-09,91;CL:0000048,1.66e-09,91;CL:0000034,8.60e-09,97;CL:0002612,1.19e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!3.17e-09!11;UBERON:0002410!8.89e-09!9;UBERON:0000073!1.17e-07!75;UBERON:0001016!1.17e-07!75;UBERON:0001017!4.18e-07!73;UBERON:0005743!4.18e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.53e-48,9;UBERON:0000010,6.24e-39,11;UBERON:0000011,2.15e-17,3;UBERON:0000013,5.76e-17,3;UBERON:0010313,1.52e-16,3;UBERON:0002342,1.52e-16,3;UBERON:0002005,1.52e-16,3;UBERON:0005428,1.52e-16,3;UBERON:0005062,1.52e-16,3;UBERON:0001017,2.06e-16,73;UBERON:0001016,6.39e-16,75;UBERON:0004684,8.08e-16,3;UBERON:0002275,8.08e-16,3;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002257,1.19e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.311068836925433,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,1.27687338085188,1.84327839907492,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0,0.45839474333043,1.76777151284201,1.42371680799103,0,0.227178579999552,0.453429360640713,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0.259786004602869,0.70667914902068,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.753613202763113,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0,0.62336413367868,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0,0,0.180062129805349,0.150704817835715,0,0.512454881139399,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0.730999937126662,0.219550115291051,0.134206418760372,0.210289948564127,0.308713837137853,0,0.264450566663544,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0,0.321101179975584,0.234423373184406,0.327869890753351,0,5.04813151066011,8.98009111882268,14.4333676480975,23.1799734013975,20.7202766896627,18.3999745012741,19.8357243820698,12.5670018901864,17.392662229647,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.556275906031529,0,0,0.185194527369712,0.376736914009382,0,0,0,0.139951452323658,0,0,0.790839983952838,0.203319467126849,0.540026704109006,0.627264888043406,0.655087691238533,0.809186078308924,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,0,0.515559547031063,0.685082519770642,0.755393897389701,0,1.35096360967266,0.906284817968409,0,0.103787347584177,0.399024873401031,0.512200817262403,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.588795680537589,0,0.532427418478012,0.953744759789284,0.145346416632329,0.376437521661322,0.0846146078916765,0.73171189149109,0.526139422875686,0.135804113845862,0,0.474540072496697,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr17:64660640..64660669,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:64660640..64660669,- | |||
|description=CAGE_peak_at_chr17:64660640..64660669,- | |||
|id=chr17:64660640..64660669,- | |||
|ontology_enrichment_celltype=CL:0000107!8.89e-09!9;CL:0000540!3.25e-07!33;CL:0000047!3.25e-07!33;CL:0000031!3.25e-07!33;CL:0000404!3.25e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.53e-48,9;CL:0000540,1.30e-29,33;CL:0000047,1.30e-29,33;CL:0000031,1.30e-29,33;CL:0000404,1.30e-29,33;CL:0000221,4.44e-25,44;CL:0000133,4.44e-25,44;CL:0000393,8.83e-25,39;CL:0000211,8.83e-25,39;CL:0002319,2.64e-22,43;CL:0002610,8.08e-16,3;CL:0002321,4.91e-15,70;CL:0000723,1.66e-09,91;CL:0000048,1.66e-09,91;CL:0000034,8.60e-09,97;CL:0002612,1.19e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.17e-09!11;UBERON:0002410!8.89e-09!9;UBERON:0000073!1.17e-07!75;UBERON:0001016!1.17e-07!75;UBERON:0001017!4.18e-07!73;UBERON:0005743!4.18e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.53e-48,9;UBERON:0000010,6.24e-39,11;UBERON:0000011,2.15e-17,3;UBERON:0000013,5.76e-17,3;UBERON:0010313,1.52e-16,3;UBERON:0002342,1.52e-16,3;UBERON:0002005,1.52e-16,3;UBERON:0005428,1.52e-16,3;UBERON:0005062,1.52e-16,3;UBERON:0001017,2.06e-16,73;UBERON:0001016,6.39e-16,75;UBERON:0004684,8.08e-16,3;UBERON:0002275,8.08e-16,3;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002257,1.19e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0.311068836925433,0,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,1.27687338085188,1.84327839907492,0.131886287730194,0.0914876436024097,0.52091337055676,0.558365998002762,0,0.45839474333043,1.76777151284201,1.42371680799103,0,0.227178579999552,0.453429360640713,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0.259786004602869,0.70667914902068,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.304465478312141,0.230615497256059,0.753613202763113,0.352766121407114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0,0,0.62336413367868,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0,0,0.180062129805349,0.150704817835715,0,0.512454881139399,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0,0.233530684734339,0.16455984991348,0,0,0.730999937126662,0.219550115291051,0.134206418760372,0.210289948564127,0.308713837137853,0,0.264450566663544,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.597423819763102,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0,0.321101179975584,0.234423373184406,0.327869890753351,0,5.04813151066011,8.98009111882268,14.4333676480975,23.1799734013975,20.7202766896627,18.3999745012741,19.8357243820698,12.5670018901864,17.392662229647,0.321321316421807,0.141940085208269,0,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.258428293168221,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0,0,0.164549020602121,0.608929898229199,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0.556275906031529,0,0,0.185194527369712,0.376736914009382,0,0,0,0.139951452323658,0,0,0.790839983952838,0.203319467126849,0.540026704109006,0.627264888043406,0.655087691238533,0.809186078308924,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0,0,0,1.12950368523413,0.460325236507177,0,0.515559547031063,0.685082519770642,0.755393897389701,0,1.35096360967266,0.906284817968409,0,0.103787347584177,0.399024873401031,0.512200817262403,0,0.209613162627982,0,0.44449345560323,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.229741875822453,0,0.115884325944855,0,0.412085900803307,0.588795680537589,0,0.532427418478012,0.953744759789284,0.145346416632329,0.376437521661322,0.0846146078916765,0.73171189149109,0.526139422875686,0.135804113845862,0,0.474540072496697,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr17:64660640..64660669,- | |||
}} |
Latest revision as of 05:37, 5 August 2015
Short description: | p@chr17:64660640..64660669, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:64660640..64660669, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.53e-48 | 9 |
neuron | 1.30e-29 | 33 |
neuronal stem cell | 1.30e-29 | 33 |
neuroblast | 1.30e-29 | 33 |
electrically signaling cell | 1.30e-29 | 33 |
ectodermal cell | 4.44e-25 | 44 |
neurectodermal cell | 4.44e-25 | 44 |
electrically responsive cell | 8.83e-25 | 39 |
electrically active cell | 8.83e-25 | 39 |
neural cell | 2.64e-22 | 43 |
raphe nuclei neuron | 8.08e-16 | 3 |
embryonic cell | 4.91e-15 | 70 |
somatic stem cell | 1.66e-09 | 91 |
multi fate stem cell | 1.66e-09 | 91 |
stem cell | 8.60e-09 | 97 |
neuron of the ventral spinal cord | 1.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 8.53e-48 | 9 |
peripheral nervous system | 6.24e-39 | 11 |
parasympathetic nervous system | 2.15e-17 | 3 |
sympathetic nervous system | 5.76e-17 | 3 |
neural crest-derived structure | 1.52e-16 | 3 |
neural crest | 1.52e-16 | 3 |
enteric nervous system | 1.52e-16 | 3 |
vagal neural crest | 1.52e-16 | 3 |
neural fold | 1.52e-16 | 3 |
central nervous system | 2.06e-16 | 73 |
nervous system | 6.39e-16 | 75 |
raphe nuclei | 8.08e-16 | 3 |
reticular formation | 8.08e-16 | 3 |
ectoderm-derived structure | 6.62e-14 | 95 |
ectoderm | 6.62e-14 | 95 |
presumptive ectoderm | 6.62e-14 | 95 |
ventral horn of spinal cord | 1.19e-07 | 3 |