FFCP PHASE1:Hg19::chr5:18990592..18990594,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:18990592..18990594,- | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_at_chr5:18990592..18990594,- | |||
|id=chr5:18990592..18990594,- | |||
|ontology_enrichment_celltype=CL:0000159!7.58e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000319;6.44e-16;1!CL:1000415;1.20e-08;2!CL:0000159;1.29e-08;2!CL:0000054;2.57e-08;2!CL:0000137;2.57e-08;2!CL:0000092;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,6.44e-16,1;CL:1000415,1.20e-08,2;CL:0000159,1.29e-08,2;CL:0000054,3.08e-08,2;CL:0000137,3.08e-08,2;CL:0000092,3.08e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.54e-16!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.08e-28;8!DOID:3030;6.44e-16;1!DOID:0060085;2.56e-15;1!DOID:3165;2.56e-15;1!DOID:0060121;2.56e-15;1!DOID:2438;2.56e-15;1!DOID:4418;2.56e-15;1!DOID:200;2.57e-08;2!DOID:4305;2.57e-08;2!DOID:8692;7.09e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.73e-29,8;DOID:3030,6.44e-16,1;DOID:0060085,3.66e-15,1;DOID:3165,3.66e-15,1;DOID:0060121,3.66e-15,1;DOID:2438,3.66e-15,1;DOID:4418,3.66e-15,1;DOID:200,3.08e-08,2;DOID:4305,3.08e-08,2;DOID:8692,1.22e-07,31;DOID:2531,6.22e-07,51;DOID:0060083,6.22e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.00e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.34e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.34e-15,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,2.22273980289274,0,0,0,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,1.19512109114209,0,0,0,0,0,0,1.57916962432026,2.15668787749514,2.3495022176618,5.88236571444974,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19228767021794,0,0,16.1119228705583,0,0.799238438328521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,3.16178611036711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,11.0597808939174,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41193548092464,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72742072974897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0.101988829741982,0,0,0.250707539292375,0.151557396436479,0.803892390468535,0,0,0,0,0,0,3.58821960257963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:18990592..18990594,- | |||
}} |
Latest revision as of 14:08, 30 July 2015
Short description: | p@chr5:18990592..18990594, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:18990592..18990594, - |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 6.44e-16 | 1 |
epithelial cell of gall bladder | 1.20e-08 | 2 |
seromucus secreting cell | 1.29e-08 | 2 |
bone matrix secreting cell | 3.08e-08 | 2 |
osteocyte | 3.08e-08 | 2 |
osteoclast | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.34e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.73e-29 | 8 |
mucinous adenocarcinoma | 6.44e-16 | 1 |
organ system benign neoplasm | 3.66e-15 | 1 |
skin benign neoplasm | 3.66e-15 | 1 |
integumentary system benign neoplasm | 3.66e-15 | 1 |
dermis tumor | 3.66e-15 | 1 |
cutaneous fibrous histiocytoma | 3.66e-15 | 1 |
giant cell tumor | 3.08e-08 | 2 |
bone giant cell tumor | 3.08e-08 | 2 |
myeloid leukemia | 1.22e-07 | 31 |
hematologic cancer | 6.22e-07 | 51 |
immune system cancer | 6.22e-07 | 51 |