FFCP PHASE1:Hg19::chr5:34599678..34599683,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:34599678..34599683,- | |||
|coexpression_cluster_id=C513 | |||
|description=CAGE_peak_at_chr5:34599678..34599683,- | |||
|id=chr5:34599678..34599683,- | |||
|ontology_enrichment_celltype=CL:0002076!4.49e-10!43;CL:0002202!1.40e-07!9;CL:0002632!1.40e-07!9;CL:0002251!2.91e-07!21;CL:0000223!5.71e-07!59;CL:0002368!7.83e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;4.65e-16;13!CL:0002202;7.58e-11;9!CL:0002632;7.58e-11;9!CL:0000307;8.31e-09;3!CL:0002328;1.21e-08;3!CL:0002582;1.21e-08;3!CL:0002076;3.49e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.20e-16,13;CL:0002202,6.87e-11,9;CL:0002632,6.87e-11,9;CL:0002076,6.91e-09,42;CL:0000068,8.31e-09,3;CL:0000069,8.31e-09,3;CL:0000307,8.31e-09,3;CL:0000377,8.31e-09,3;CL:0002328,1.04e-08,3;CL:0002582,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;2.59e-12;2!UBERON:0010056;2.59e-12;2!CL:0000377;8.31e-09;3 | |||
|ontology_enrichment_disease=DOID:14566!4.89e-08!239;DOID:162!6.14e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.86e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.34e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0000344!3.22e-09!12;UBERON:0003729!8.28e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.21e-08;3!UBERON:0004815;1.21e-08;3!UBERON:0002031;1.21e-08;3!UBERON:0001033;1.21e-08;3!UBERON:0007196;7.20e-07;15!UBERON:0001558;7.20e-07;15!UBERON:0003343;8.61e-07;4!UBERON:0004785;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,9.66e-09,3;UBERON:0001033,9.66e-09,3;UBERON:0010056,9.66e-09,3;UBERON:0004815,1.04e-08,3;UBERON:0002031,1.04e-08,3;UBERON:0000065,5.55e-07,54;UBERON:0007196,6.79e-07,15;UBERON:0001558,6.79e-07,15;UBERON:0003343,7.27e-07,4;UBERON:0004785,7.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0.794455084879313,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0.57978255948989,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.626909658919938,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,1.03850885836724,0,0,0,0,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0.275673144969061,0.107420244868274,0,0.0852266274161009,0,0,0,2.67986696238627,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.288666338176536,0,6.53345909167936,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,1.2517279311405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13852239634511,0.158936578980379,0,0,0.141353071433941,0.216388639742091,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0.548167698587004,0.19871461170299,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621051827505038,0,0,0.521745061811734,0.300515217994437,0.380805212168795,1.22061219961398,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589848616738702,0.366857197043358,1.84841065840541,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0,0,0,0.945550727071746,0.778619813244484,0,0,0,0,0,0,0,0,0.697448552208751,0,0,0.207216164163037,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0.325613074443898,0,0,0.269475606319761,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr5:34599678..34599683,- | |||
}} |
Latest revision as of 14:27, 30 July 2015
Short description: | p@chr5:34599678..34599683, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:34599678..34599683, - |
Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 4.20e-16 | 13 |
epithelial cell of tracheobronchial tree | 6.87e-11 | 9 |
epithelial cell of lower respiratory tract | 6.87e-11 | 9 |
endo-epithelial cell | 6.91e-09 | 42 |
duct epithelial cell | 8.31e-09 | 3 |
branched duct epithelial cell | 8.31e-09 | 3 |
tracheal epithelial cell | 8.31e-09 | 3 |
tracheoblast | 8.31e-09 | 3 |
bronchial epithelial cell | 1.04e-08 | 3 |
visceral preadipocyte | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 9.66e-09 | 3 |
gustatory system | 9.66e-09 | 3 |
future tongue | 9.66e-09 | 3 |
lower respiratory tract epithelium | 1.04e-08 | 3 |
epithelium of bronchus | 1.04e-08 | 3 |
respiratory tract | 5.55e-07 | 54 |
tracheobronchial tree | 6.79e-07 | 15 |
lower respiratory tract | 6.79e-07 | 15 |
mucosa of oral region | 7.27e-07 | 4 |
respiratory system mucosa | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.34e-15 | 14 |