FFCP PHASE1:Hg19::chr5:78281775..78281788,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=411 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=714 | |||
|TSSclassifier=strong | |||
|UniProt=A8K4A0,Q8N322 | |||
|association_with_transcript=-9bp_to_NM_198709,uc003kfr.3_5end | |||
|cluster_id=chr5:78281775..78281788,- | |||
|description=CAGE_peak_10_at_ARSB_5end | |||
|id=chr5:78281775..78281788,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002580;4.67e-17;3!CL:0002334;5.30e-16;12!CL:0002617;2.22e-12;2!CL:0000153;7.33e-10;9!CL:0000447;7.33e-10;9!CL:0000327;8.87e-09;15!CL:0000138;1.38e-08;6!CL:0002615;1.63e-08;3!CL:0002579;2.07e-08;3!CL:0000136;4.07e-07;13!CL:0000511;6.24e-07;1!CL:0002625;6.24e-07;1!CL:0000216;6.24e-07;1!CL:0002581;8.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,2.44e-17,3;CL:0002334,3.63e-16,12;CL:0002617,2.16e-12,2;CL:0000153,6.54e-10,9;CL:0000447,6.54e-10,9;CL:0000136,5.17e-09,15;CL:0000327,9.19e-09,15;CL:0000058,1.21e-08,6;CL:0000138,1.21e-08,6;CL:0002615,1.66e-08,3;CL:0002579,2.07e-08,3;CL:0000511,7.19e-07,1;CL:0002625,7.19e-07,1;CL:0000216,7.19e-07,1;CL:0002581,7.60e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!6.31e-08!6;UBERON:0002358!6.31e-08!6;UBERON:0003684!6.31e-08!6;UBERON:0001178!6.31e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.57e-15;9!UBERON:0000042;1.57e-15;9!UBERON:0003688;3.04e-15;6!UBERON:0002358;3.04e-15;6!UBERON:0003684;3.04e-15;6!UBERON:0001178;3.04e-15;6!UBERON:0000310;1.01e-13;10!UBERON:0001443;1.89e-12;11!UBERON:0007195;4.98e-07;1!UBERON:0001136;6.24e-07;1!UBERON:0001343;6.24e-07;1!UBERON:0004910;6.24e-07;1!UBERON:0004813;6.24e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.11e-15,6;UBERON:0002358,3.11e-15,6;UBERON:0003684,3.11e-15,6;UBERON:0001178,3.11e-15,6;UBERON:0000310,7.28e-14,10;UBERON:0001443,1.40e-12,11;UBERON:0004457,1.42e-11,12;UBERON:0000042,1.42e-11,12;UBERON:0007195,5.13e-07,1;UBERON:0001136,7.19e-07,1;UBERON:0001343,7.19e-07,1;UBERON:0004910,7.19e-07,1;UBERON:0005154,7.19e-07,1;UBERON:0005295,7.19e-07,1;UBERON:0004813,7.19e-07,1;UBERON:0005297,7.19e-07,1;UBERON:0005294,7.19e-07,1;UBERON:0010141,7.19e-07,1;UBERON:0005891,7.19e-07,1 | |||
|phase1_expression=9.08391896352783,3.42560838225573,3.38290569830331,7.00513088471913,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,1.11957737119962,0.647787332037959,0.257575567634187,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,1.29096936716765,0,0,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,2.00535164254356,1.73815822752988,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.263504357079378,0.982343066232845,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0.35576626268671,1.00416183829401,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0.759783069987479,0,0.286836620748814,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,1.22595118319608,0.600952235626387,0.226864366320042,0.179389635688862,0,0,0,0,0,0,2.53164498361899,0.194874010322397,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.469634776943287,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0.399891964728228,0,1.00451418286425,0,0.239624855491583,0,1.42636905040718,2.17171960001369,0.205476322550383,0.537182889719687,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,4.96215615637554,3.6830873589135,1.96462066103151,3.33161788064823,3.58195074346692,0.64341568457443,2.96836132889982,0,0,0,0.519254429183621,0,0,0,0,0,0,0.262248829918848,0.451199612907412,0.0770153371044148,0.784349769176855,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0,0,0,0,3.21367859688319,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0.616067160352178,0,0,0.55597265731176,0.572499546967965,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0,0.606547444719948,1.58510321173008,0,0,1.70599442741899,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0,0,0.7133421029625,0,6.12212142363226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0.307240764308458,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0.994147647766298,0,0,0.494411622680279,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0,0,4.44547960578548,0,0.278304294485554,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,1.48124672601102,0,0,0,0.638002319463839,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0.223171457441873,0,1.08089965062721,0,0.236349546921671,0.0824158583811665,0.26961417541674,0.393709926058995,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,1.26089131678717,0.419636705079985,0,0.179287339332845,0,0,0,0,0.542999601753713,1.72844298240254,0.326587360109409,0,0,0,0,0.146552233678082,0,0.258565912723101,0,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.250381861413,0,0.221858103073705,0.124192805882767,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0,0,0.443565449968902,0,0,0,0,0.265841714557995,0,0,0.380805212168795,0,0.545545977607678,0.107410557042488,0,0.398095888698616,0,0,1.01024846629776,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0.156986185701028,0.157115589916002,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0,0,0.196308467114945,0,0,1.86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| |||
|short_description=p10@ARSB | |||
}} |
Latest revision as of 20:59, 18 September 2015
Short description: | p10@ARSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARSB_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_NM_198709, uc003kfr.3_5end |
EntrezGene: | ARSB |
HGNC: | 714 |
UniProt: | A8K4A0Q8N322 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 2.44e-17 | 3 |
preadipocyte | 3.63e-16 | 12 |
adipocyte of breast | 2.16e-12 | 2 |
GAG secreting cell | 6.54e-10 | 9 |
carbohydrate secreting cell | 6.54e-10 | 9 |
fat cell | 5.17e-09 | 15 |
extracellular matrix secreting cell | 9.19e-09 | 15 |
chondroblast | 1.21e-08 | 6 |
chondrocyte | 1.21e-08 | 6 |
adipocyte of omentum tissue | 1.66e-08 | 3 |
omentum preadipocyte | 2.07e-08 | 3 |
androgen binding protein secreting cell | 7.19e-07 | 1 |
seminiferous tubule epithelial cell | 7.19e-07 | 1 |
Sertoli cell | 7.19e-07 | 1 |
perirenal preadipocyte | 7.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.11e-15 | 6 |
peritoneum | 3.11e-15 | 6 |
abdominal cavity | 3.11e-15 | 6 |
visceral peritoneum | 3.11e-15 | 6 |
breast | 7.28e-14 | 10 |
chest | 1.40e-12 | 11 |
cavity lining | 1.42e-11 | 12 |
serous membrane | 1.42e-11 | 12 |
stroma of bone marrow | 5.13e-07 | 1 |
mesothelium | 7.19e-07 | 1 |
seminiferous tubule of testis | 7.19e-07 | 1 |
epithelium of male gonad | 7.19e-07 | 1 |
epithelial cord | 7.19e-07 | 1 |
sex cord | 7.19e-07 | 1 |
seminiferous tubule epithelium | 7.19e-07 | 1 |
testis sex cord | 7.19e-07 | 1 |
genital ridge | 7.19e-07 | 1 |
primitive sex cord of indifferent gonad | 7.19e-07 | 1 |
coelomic epithelium | 7.19e-07 | 1 |