FFCP PHASE1:Mm9::chr19:38298555..38298585,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=70567|HGNC=|MCL_coexpression_id=1|UniProt=Q8BP78|association_with_transcript=36bp_to_NM_001081075,uc008hjg.1,uc008hjh.1_5end|description=CAGE_peak_2_at_5730455O13Rik_5end|id=chr19:38298555..38298585,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!8.55e-11!63;UBERON:0000955!1.18e-08!50;UBERON:0006238!1.18e-08!50;UBERON:0002616!3.76e-08!49;UBERON:0001049!7.68e-08!52;UBERON:0005068!7.68e-08!52;UBERON:0006241!7.68e-08!52;UBERON:0007135!7.68e-08!52;UBERON:0003056!3.44e-07!49;UBERON:0002021!5.22e-07!10;UBERON:0000411!5.22e-07!10;UBERON:0001950!5.22e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-08,54;UBERON:0010371,1.97e-08,73;UBERON:0002346,7.99e-08,64;UBERON:0003075,7.99e-08,64;UBERON:0007284,7.99e-08,64;UBERON:0001049,9.70e-08,52;UBERON:0005068,9.70e-08,52;UBERON:0006241,9.70e-08,52;UBERON:0007135,9.70e-08,52;UBERON:0002021,3.09e-07,10;UBERON:0000411,3.09e-07,10;UBERON:0001950,3.09e-07,10;UBERON:0000955,3.37e-07,47;UBERON:0006238,3.37e-07,47;UBERON:0003056,5.52e-07,49|phase1_expression=2.7225304007815,0.697950815278722,1.36499771816861,0.60492842261366,0,1.00727563147134,0.934450562382103,0.129123323441576,0,0,0.513653904676515,0.558405112967355,1.02720437958723,0.699363219351979,0,0.202475267389826,1.39912375625629,0.788655413395594,1.37114433605739,0.84877930359606,2.29616883407888,0.397163804803541,1.04479915655574,0.799962113967033,0.68822784320151,0,0.430761996159075,0.861884930743556,0.570070258369122,0.504060259519861,0.443461021310609,1.27006134691926,0,0,1.1554064790051,0.166234645358492,0.408338712524738,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0.485510353031154,1.51076181570693,1.62203089951223,1.65192076945513,0.782391344348039,0,0.878744730937887,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,1.03134418455488,0.404632921719196,3.1739458756322,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,0.675029691658453,0.210324961351382,1.71390590642282,1.54607978666129,1.71487118900936,0.575072826109418,2.75765635983006,5.50579404996943,6.89511625660014,7.0659005297872,1.05509030184155,1.18933936683133,0.52091337055676,5.862842979029,2.8138130501584,6.57032465440283,2.06240009831567,3.13217697758026,1.67759501242771,1.06016670666458,0.831287161174641,0.579728977403356,0,1.3599426674155,0.539703191637817,2.59910566979068,4.03224198387602,1.12355536105401,2.21559419351475,1.55871602761721,1.7666978725517,1.69012103732017,1.28326477414318,2.54805239706646,7.11066703153331,0.432982082022428,1.01343946190039,0,1.94112595522402,0.776813650941515,1.92974780784272,1.21439728736295,0.304465478312141,0.922461989024234,1.20578112442098,0.823120949949934,1.63366568728578,2.47194967734374,2.16899035379867,0.884610551949874,2.75003644910596,1.32504911076236,2.42437626567611,1.86391761218122,6.73395833126558,6.70229461803056,0.766371165625774,0.838705871541442,0,1.14363204365758,10.9347166765521,5.94750783664214,5.02617408451458,6.08385120672968,8.95004100656157,5.194701113989,6.48965052271031,1.2220723662038,1.7416975885413,4.0435641349388,3.15662783829711,1.95180664444056,1.14951052216736,1.62055916824814,1.20563854268572,1.97305847538851,2.3060469651273,2.24884138943349,4.65666067330228,0,1.70195472151037,1.75951124163949,0.43839146485515,2.22437799380478,1.39300866608867,2.26360350048738,1.59227413454795,0.702213187313235,1.02939162845886,0,1.03562886267751,0.938104239924385,0.900310307305074,0.23674473558521,0.983821158737019,0.617068451549513,1.86027155800326,1.60964040839772,1.75148013550754,2.63295759861569,1.31333971263276,2.75633952455909,3.07019973593198,3.73235195994786,1.61047702512446,7.57043814830858,3.80747065803352,0.660837565967596,0.264450566663544,0.426576501070468,1.16118335930219,0.902072229254653,0.80673409849337,1.11189021922435,0.760902504450237,0.949058123089023,1.4822905925161,1.25667604400135,1.39269530428806,0.974820435595601,1.79763881730844,1.08069024937347,1.59313018603494,0.379335801906163,1.25673363870702,0,1.83286195060783,1.16371492300575,1.40271639780637,2.15004226222475,2.36176236767363,2.35498091762062,2.46794327843601,2.07516838961004,1.00107063429656,1.17935397067922,1.79889689907883,0.811440485554012,1.20588579876208,1.01850340712568,0,3.08056930872567,0.823684239564244,11.5014565221884,0.744281895337007,3.74445207737473,4.79899868099512,2.33216637578486,2.41221760681684,1.10851914099963,0.757965647081939,0.977789858652155,0.848725428875941,1.64283173801951,0.670025029767263,1.19021820443007,0.780534591431195,1.26108115284953,1.32878813789265,2.55127629851979,0.983179888294428,1.72684981865896,1.88043776155965,0,1.08781136763742,3.93411418415229,1.10374698521893,7.54587772942622,10.7834751664827,1.63934945376675,3.02965112645248,1.26203287766503,0.390438744296638,0.430846795465598,0.477937595905104,1.11399337041197,0.566153061577665,0.404810701674894,0.876767573733936,0.395287777946524,8.35435422696698,1.41940085208269,0.712262414669021,1.14020871547503,1.64970122972535,7.96470830039777,1.21390318077491,1.209294227859,1.88605079755898,1.77181135728464,1.22974059177571,3.10113951801865,1.45413491791002,1.78248689192361,4.10847785316561,9.48767477174989,8.25084345985495,7.83011093233712,1.62054984628179,0.905510786479282,1.50035924522115,1.59606210278046,1.24858172321449,3.1264313914403,0.913394847343798,2.3467170806371,1.90648863777438,1.7642271844397,2.30840754118072,1.93757312035087,1.56813604813205,0.954978752025092,1.96969079694074,1.7488850197791,7.04616147639937,1.87957968877638,0.619160603889667,1.48155621895769,1.50694765603753,1.23024804948923,1.60144721244566,0.849892149969277,0.69975726161829,0.276399947608848,0,0.790839983952838,1.42323626988794,0.86404272657441,1.46361807210128,2.62035076495413,1.48350781023303,1.73572257023205,1.83229159388821,1.03691978633434,3.10669656543463,2.25477175473676,1.04661582230785,1.48912641411388,0.972255941720238,1.16243841129958,2.02747350588934,1.64300134104056,2.21347454234715,1.78260885523708,4.83168241652012,4.03242008761012,1.26404448251271,0.810900861160657,1.1298205288131,0.649604114888975,0.537080087002444,0.39736270956253,0.360586348559907,1.03382669022204,1.21159739937777,0.914481679859998,1.31074040677893,1.07203668813728,1.34696578296461,1.8700304349051,2.72076460338254,0,0.897138566094757,0.335769232728157,2.89784391048286,0.93841237725591,1.09890974560359,1.2862102744744,1.00314420807073,2.82375921308533,7.36520378411483,5.15605962095457,8.07709957015332,7.53590771747707,12.0863023582352,2.70009000092722,12.158672487054,9.9691329976525,7.7664046762773,1.66059756134683,0.798049746802062,1.19513524027894,2.18796045361465,1.25767897576789,1.47074806760011,2.44471400581777,0.824140228955577,0.962757628775446,3.28506375292937,2.02783439912192,2.26351609663291,2.34103768674706,2.36893063898016,3.10151532360312,2.38146845641537,2.20180219295225,3.47236596834669,1.64834360321323,3.97437084362873,2.74295401908332,1.59728225543404,3.09967046931517,2.47088908274958,2.54095327121393,1.60767754994185,2.0122077016005,1.8414879800649,3.66671107383827,2.24456908663095,2.72860541685601,1.67457620038458,1.63692417267876,2.94379998253335,3.2794123866794,1.74867404556562,1.63752125911786,1.71896843238639,1.91288332068843,2.64709702943419,1.85494268496337|short_description=p2@5730455O13Rik}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70567 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BP78 | |||
|association_with_transcript=36bp_to_NM_001081075,uc008hjg.1,uc008hjh.1_5end | |||
|cluster_id=chr19:38298555..38298585,- | |||
|description=CAGE_peak_2_at_5730455O13Rik_5end | |||
|id=chr19:38298555..38298585,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.55e-11!63;UBERON:0000955!1.18e-08!50;UBERON:0006238!1.18e-08!50;UBERON:0002616!3.76e-08!49;UBERON:0001049!7.68e-08!52;UBERON:0005068!7.68e-08!52;UBERON:0006241!7.68e-08!52;UBERON:0007135!7.68e-08!52;UBERON:0003056!3.44e-07!49;UBERON:0002021!5.22e-07!10;UBERON:0000411!5.22e-07!10;UBERON:0001950!5.22e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-08,54;UBERON:0010371,1.97e-08,73;UBERON:0002346,7.99e-08,64;UBERON:0003075,7.99e-08,64;UBERON:0007284,7.99e-08,64;UBERON:0001049,9.70e-08,52;UBERON:0005068,9.70e-08,52;UBERON:0006241,9.70e-08,52;UBERON:0007135,9.70e-08,52;UBERON:0002021,3.09e-07,10;UBERON:0000411,3.09e-07,10;UBERON:0001950,3.09e-07,10;UBERON:0000955,3.37e-07,47;UBERON:0006238,3.37e-07,47;UBERON:0003056,5.52e-07,49 | |||
|phase1_expression=2.7225304007815,0.697950815278722,1.36499771816861,0.60492842261366,0,1.00727563147134,0.934450562382103,0.129123323441576,0,0,0.513653904676515,0.558405112967355,1.02720437958723,0.699363219351979,0,0.202475267389826,1.39912375625629,0.788655413395594,1.37114433605739,0.84877930359606,2.29616883407888,0.397163804803541,1.04479915655574,0.799962113967033,0.68822784320151,0,0.430761996159075,0.861884930743556,0.570070258369122,0.504060259519861,0.443461021310609,1.27006134691926,0,0,1.1554064790051,0.166234645358492,0.408338712524738,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0.485510353031154,1.51076181570693,1.62203089951223,1.65192076945513,0.782391344348039,0,0.878744730937887,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.573066879877513,1.03134418455488,0.404632921719196,3.1739458756322,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,0.675029691658453,0.210324961351382,1.71390590642282,1.54607978666129,1.71487118900936,0.575072826109418,2.75765635983006,5.50579404996943,6.89511625660014,7.0659005297872,1.05509030184155,1.18933936683133,0.52091337055676,5.862842979029,2.8138130501584,6.57032465440283,2.06240009831567,3.13217697758026,1.67759501242771,1.06016670666458,0.831287161174641,0.579728977403356,0,1.3599426674155,0.539703191637817,2.59910566979068,4.03224198387602,1.12355536105401,2.21559419351475,1.55871602761721,1.7666978725517,1.69012103732017,1.28326477414318,2.54805239706646,7.11066703153331,0.432982082022428,1.01343946190039,0,1.94112595522402,0.776813650941515,1.92974780784272,1.21439728736295,0.304465478312141,0.922461989024234,1.20578112442098,0.823120949949934,1.63366568728578,2.47194967734374,2.16899035379867,0.884610551949874,2.75003644910596,1.32504911076236,2.42437626567611,1.86391761218122,6.73395833126558,6.70229461803056,0.766371165625774,0.838705871541442,0,1.14363204365758,10.9347166765521,5.94750783664214,5.02617408451458,6.08385120672968,8.95004100656157,5.194701113989,6.48965052271031,1.2220723662038,1.7416975885413,4.0435641349388,3.15662783829711,1.95180664444056,1.14951052216736,1.62055916824814,1.20563854268572,1.97305847538851,2.3060469651273,2.24884138943349,4.65666067330228,0,1.70195472151037,1.75951124163949,0.43839146485515,2.22437799380478,1.39300866608867,2.26360350048738,1.59227413454795,0.702213187313235,1.02939162845886,0,1.03562886267751,0.938104239924385,0.900310307305074,0.23674473558521,0.983821158737019,0.617068451549513,1.86027155800326,1.60964040839772,1.75148013550754,2.63295759861569,1.31333971263276,2.75633952455909,3.07019973593198,3.73235195994786,1.61047702512446,7.57043814830858,3.80747065803352,0.660837565967596,0.264450566663544,0.426576501070468,1.16118335930219,0.902072229254653,0.80673409849337,1.11189021922435,0.760902504450237,0.949058123089023,1.4822905925161,1.25667604400135,1.39269530428806,0.974820435595601,1.79763881730844,1.08069024937347,1.59313018603494,0.379335801906163,1.25673363870702,0,1.83286195060783,1.16371492300575,1.40271639780637,2.15004226222475,2.36176236767363,2.35498091762062,2.46794327843601,2.07516838961004,1.00107063429656,1.17935397067922,1.79889689907883,0.811440485554012,1.20588579876208,1.01850340712568,0,3.08056930872567,0.823684239564244,11.5014565221884,0.744281895337007,3.74445207737473,4.79899868099512,2.33216637578486,2.41221760681684,1.10851914099963,0.757965647081939,0.977789858652155,0.848725428875941,1.64283173801951,0.670025029767263,1.19021820443007,0.780534591431195,1.26108115284953,1.32878813789265,2.55127629851979,0.983179888294428,1.72684981865896,1.88043776155965,0,1.08781136763742,3.93411418415229,1.10374698521893,7.54587772942622,10.7834751664827,1.63934945376675,3.02965112645248,1.26203287766503,0.390438744296638,0.430846795465598,0.477937595905104,1.11399337041197,0.566153061577665,0.404810701674894,0.876767573733936,0.395287777946524,8.35435422696698,1.41940085208269,0.712262414669021,1.14020871547503,1.64970122972535,7.96470830039777,1.21390318077491,1.209294227859,1.88605079755898,1.77181135728464,1.22974059177571,3.10113951801865,1.45413491791002,1.78248689192361,4.10847785316561,9.48767477174989,8.25084345985495,7.83011093233712,1.62054984628179,0.905510786479282,1.50035924522115,1.59606210278046,1.24858172321449,3.1264313914403,0.913394847343798,2.3467170806371,1.90648863777438,1.7642271844397,2.30840754118072,1.93757312035087,1.56813604813205,0.954978752025092,1.96969079694074,1.7488850197791,7.04616147639937,1.87957968877638,0.619160603889667,1.48155621895769,1.50694765603753,1.23024804948923,1.60144721244566,0.849892149969277,0.69975726161829,0.276399947608848,0,0.790839983952838,1.42323626988794,0.86404272657441,1.46361807210128,2.62035076495413,1.48350781023303,1.73572257023205,1.83229159388821,1.03691978633434,3.10669656543463,2.25477175473676,1.04661582230785,1.48912641411388,0.972255941720238,1.16243841129958,2.02747350588934,1.64300134104056,2.21347454234715,1.78260885523708,4.83168241652012,4.03242008761012,1.26404448251271,0.810900861160657,1.1298205288131,0.649604114888975,0.537080087002444,0.39736270956253,0.360586348559907,1.03382669022204,1.21159739937777,0.914481679859998,1.31074040677893,1.07203668813728,1.34696578296461,1.8700304349051,2.72076460338254,0,0.897138566094757,0.335769232728157,2.89784391048286,0.93841237725591,1.09890974560359,1.2862102744744,1.00314420807073,2.82375921308533,7.36520378411483,5.15605962095457,8.07709957015332,7.53590771747707,12.0863023582352,2.70009000092722,12.158672487054,9.9691329976525,7.7664046762773,1.66059756134683,0.798049746802062,1.19513524027894,2.18796045361465,1.25767897576789,1.47074806760011,2.44471400581777,0.824140228955577,0.962757628775446,3.28506375292937,2.02783439912192,2.26351609663291,2.34103768674706,2.36893063898016,3.10151532360312,2.38146845641537,2.20180219295225,3.47236596834669,1.64834360321323,3.97437084362873,2.74295401908332,1.59728225543404,3.09967046931517,2.47088908274958,2.54095327121393,1.60767754994185,2.0122077016005,1.8414879800649,3.66671107383827,2.24456908663095,2.72860541685601,1.67457620038458,1.63692417267876,2.94379998253335,3.2794123866794,1.74867404556562,1.63752125911786,1.71896843238639,1.91288332068843,2.64709702943419,1.85494268496337 | |||
|short_description=p2@5730455O13Rik | |||
}} |
Latest revision as of 16:54, 25 September 2015
Short description: | p2@5730455O13Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_5730455O13Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 36bp_to_NM_001081075, uc008hjg.1, uc008hjh.1_5end |
EntrezGene: | 5730455O13Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.24e-08 | 54 |
ecto-epithelium | 1.97e-08 | 73 |
neurectoderm | 7.99e-08 | 64 |
neural plate | 7.99e-08 | 64 |
presumptive neural plate | 7.99e-08 | 64 |
neural tube | 9.70e-08 | 52 |
neural rod | 9.70e-08 | 52 |
future spinal cord | 9.70e-08 | 52 |
neural keel | 9.70e-08 | 52 |
occipital lobe | 3.09e-07 | 10 |
visual cortex | 3.09e-07 | 10 |
neocortex | 3.09e-07 | 10 |
brain | 3.37e-07 | 47 |
future brain | 3.37e-07 | 47 |
pre-chordal neural plate | 5.52e-07 | 49 |