FFCP PHASE1:Hg19::chr6:128813014..128813027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9674 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000495748_5end | |||
|cluster_id=chr6:128813014..128813027,- | |||
|description=CAGE_peak_10_at_PTPRK_5end | |||
|id=chr6:128813014..128813027,- | |||
|ontology_enrichment_celltype=CL:0002139!2.77e-19!24;CL:0000071!9.32e-15!18;CL:0002546!9.32e-15!18;CL:0000222!1.16e-12!119;CL:0000115!4.45e-12!35;CL:0002078!3.98e-11!44;CL:0000213!8.98e-11!57;CL:0000215!8.98e-11!57;CL:0002543!2.20e-07!6;CL:0002539!4.33e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002138;2.82e-26;6!CL:0002139;6.12e-19;24!CL:0002078;1.58e-10;45!CL:0000115;9.17e-09;36!CL:0000213;6.40e-08;58!CL:0000215;6.40e-08;58!CL:0002548;3.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.93e-26,6;CL:0002138,2.93e-26,6;CL:0005022,2.93e-26,6;CL:0002139,4.74e-19,24;CL:0002078,1.05e-12,45;CL:0000115,1.80e-12,36;CL:0000213,1.23e-09,58;CL:0000215,1.23e-09,58;CL:0002548,4.30e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;2.82e-26;6!UBERON:0008801;8.20e-11;1 | |||
|ontology_enrichment_disease=DOID:2394!7.78e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.57e-24!194;UBERON:0004111!1.42e-23!241;UBERON:0007023!4.65e-22!115;UBERON:0000477!6.38e-22!286;UBERON:0002616!5.82e-17!59;UBERON:0001017!1.97e-16!82;UBERON:0002049!2.37e-16!79;UBERON:0007798!2.37e-16!79;UBERON:0000483!3.17e-16!309;UBERON:0004535!4.18e-16!110;UBERON:0001009!4.32e-16!113;UBERON:0000955!6.49e-16!69;UBERON:0006238!6.49e-16!69;UBERON:0005743!7.12e-16!86;UBERON:0000119!9.21e-16!312;UBERON:0001049!1.03e-15!57;UBERON:0005068!1.03e-15!57;UBERON:0006241!1.03e-15!57;UBERON:0007135!1.03e-15!57;UBERON:0004872!3.41e-15!84;UBERON:0001986!9.32e-15!18;UBERON:0004638!9.32e-15!18;UBERON:0004852!9.32e-15!18;UBERON:0000055!1.34e-14!69;UBERON:0000073!1.37e-14!94;UBERON:0001016!1.37e-14!94;UBERON:0003075!2.07e-14!86;UBERON:0007284!2.07e-14!86;UBERON:0002780!1.05e-13!41;UBERON:0001890!1.05e-13!41;UBERON:0006240!1.05e-13!41;UBERON:0003080!3.58e-13!42;UBERON:0002346!3.78e-13!90;UBERON:0001893!3.76e-12!34;UBERON:0002791!1.06e-11!33;UBERON:0001981!3.62e-11!60;UBERON:0007500!3.62e-11!60;UBERON:0004537!3.62e-11!60;UBERON:0006965!3.62e-11!60;UBERON:0000487!4.58e-11!22;UBERON:0002020!5.38e-11!34;UBERON:0003528!5.38e-11!34;UBERON:0003914!8.70e-11!118;UBERON:0001950!1.01e-10!20;UBERON:0001869!1.34e-10!32;UBERON:0002619!1.80e-10!22;UBERON:0000467!4.88e-10!625;UBERON:0000480!5.99e-10!626;UBERON:0000468!2.23e-09!659;UBERON:0003056!3.29e-09!61;UBERON:0006914!4.15e-09!25;UBERON:0000475!4.61e-09!365;UBERON:0000033!6.12e-09!123;UBERON:0000153!6.54e-09!129;UBERON:0007811!6.54e-09!129;UBERON:0000956!1.16e-08!25;UBERON:0000203!1.16e-08!25;UBERON:0000948!8.98e-08!24;UBERON:0005498!8.98e-08!24;UBERON:0004140!8.98e-08!24;UBERON:0009881!8.98e-08!24;UBERON:0004141!8.98e-08!24;UBERON:0003084!8.98e-08!24;UBERON:0007005!8.98e-08!24;UBERON:0004139!8.98e-08!24;UBERON:0004291!8.98e-08!24;UBERON:0004121!1.27e-07!169;UBERON:0000923!1.53e-07!604;UBERON:0005291!1.53e-07!604;UBERON:0006598!1.53e-07!604;UBERON:0002532!1.53e-07!604;UBERON:0007100!1.70e-07!27;UBERON:0002050!1.83e-07!605;UBERON:0005423!1.83e-07!605;UBERON:0000947!2.49e-07!21;UBERON:0010191!2.49e-07!21;UBERON:0000481!3.43e-07!347;UBERON:0000490!3.80e-07!138;UBERON:0000924!4.14e-07!173;UBERON:0006601!4.14e-07!173;UBERON:0004237!4.33e-07!10;UBERON:0004695!4.33e-07!10;UBERON:0002111!4.33e-07!10;UBERON:0004178!4.33e-07!10;UBERON:0001135!5.50e-07!15;UBERON:0000922!6.23e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.75e-20;8!UBERON:0004536;8.75e-20;8!UBERON:0006558;8.75e-20;8!UBERON:0002465;7.02e-16;10!UBERON:0001831;8.20e-11;1!UBERON:0007195;8.20e-11;1!UBERON:0001567;8.20e-11;1!UBERON:0002119;2.05e-10;4!UBERON:0002405;7.09e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,9.00e-20,8;UBERON:0004536,9.00e-20,8;UBERON:0006558,9.00e-20,8;UBERON:0002465,7.18e-16,10;UBERON:0007195,9.97e-11,1;UBERON:0001831,1.10e-10,1;UBERON:0001567,1.10e-10,1;UBERON:0008801,1.10e-10,1;UBERON:0002119,1.78e-10,4;UBERON:0000055,2.79e-10,68;UBERON:0004535,6.04e-09,109;UBERON:0002049,8.39e-09,78;UBERON:0007798,8.39e-09,78;UBERON:0001009,1.16e-08,112 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,1.34465029290355,1.80808358407193,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.189069634328136,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,1.13061588384802,0.838998872419812,0.550236083880135,0.208994966536811,2.06733407335463,4.26919515224052,3.68192674041137,0.402829317109147,1.52054421143703,0.976248230192678,0.735326160691737,0,0.625098097988558,0.898117490504679,0.450445921933289,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0.311211035399766,1.0776853765575,0.490385709340376,0.302714855289863,0.576175924479999,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0.577465791044295,0,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.384417447767103,0,0.482561763430822,0,0,0,0,1.55776328755086,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0.869932992075073,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0.288950589901519,0.600420288709789,0.410716136675979,0,0.429765441419957,0,0.279282401272254,0.687481272035051,0,0,0,0.446342914883745,0.268733889946905,0.360299883542404,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0,0.425246896606173,0,0.157611414598396,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,0,0,3.9189245010647,0.113312091520126,0.146552233678082,0,0,0.39669780522807,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0.638341257770182,0,0,0.306345576763462,0,0,0.886068179966986,0.366078794705889,0.625954653532499,0,0.443716206147409,0.434674820589684,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0.50313580350515,0,0,0,0.15543720058278,0.73927574994817,0.159296767163702,0,1.24210365501008,1.24411862352257,0.53168342911599,0,0.901545653983311,0,0.406870733204662,0.727394636810238,0.322231671127465,0.464033759878494,0.398095888698616,0,0,0,0,0.192619830407303,1.07220795687463,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0.192914038270915,0.506827321959218,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,1.41696576325585,0.478901577171454,0.205116364240755,0,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.135075169236789,0.781078098613847,0.413373593002368,0.317079050969534,0,1.09651553371436,0.496211178389294,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0.685952037749674,0.271878931907327,0.197318320688547,0,0,0.235479278551542,0,0.280272163313789,0,0.215927591218621,0,0.285906176706625,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.511280428554946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0.196308467114945,0.594092800654172,0,0,0.939839179798536,0.45120521581504,0,0,0,0.0802413666891683,0.730336388246517,0,0.430018749454354,0,0.203974470572744,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724030971033267,0.426467963801962,0,0,0.0620747142958579,0,0.318235791390825,0,0.217716747896961,0,0.0673520530145875,0.286888821570705,0.332660356546013,0,0,0,0.179650404213174,0,0.488965776731466,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| |||
|short_description=p10@PTPRK | |||
}} |
Latest revision as of 15:49, 24 September 2015
Short description: | p10@PTPRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PTPRK_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000495748_5end |
EntrezGene: | PTPRK |
HGNC: | 9674 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.93e-26 | 6 |
endothelial cell of lymphatic vessel | 2.93e-26 | 6 |
vascular lymphangioblast | 2.93e-26 | 6 |
endothelial cell of vascular tree | 4.74e-19 | 24 |
meso-epithelial cell | 1.05e-12 | 45 |
endothelial cell | 1.80e-12 | 36 |
lining cell | 1.23e-09 | 58 |
barrier cell | 1.23e-09 | 58 |
cardiac fibroblast | 4.30e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 9.00e-20 | 8 |
lymph vasculature | 9.00e-20 | 8 |
lymphatic part of lymphoid system | 9.00e-20 | 8 |
lymphoid system | 7.18e-16 | 10 |
stroma of bone marrow | 9.97e-11 | 1 |
parotid gland | 1.10e-10 | 1 |
cheek | 1.10e-10 | 1 |
parotid gland primordium | 1.10e-10 | 1 |
left ovary | 1.78e-10 | 4 |
vessel | 2.79e-10 | 68 |
cardiovascular system | 6.04e-09 | 109 |
vasculature | 8.39e-09 | 78 |
vascular system | 8.39e-09 | 78 |
circulatory system | 1.16e-08 | 112 |