FFCP PHASE1:Hg19::chrX:54834791..54834832,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:54834791..54834832,+
|short_description=p3@MAGED2
|description=CAGE_peak_3_at_MAGED2_5end
|association_with_transcript=0bp_to_ENST00000218439,ENST000003750...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10916 | |EntrezGene=10916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16353 | |HGNC=16353 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNF1,Q5H907 | |UniProt=Q9UNF1,Q5H907 | ||
|association_with_transcript=0bp_to_ENST00000218439,ENST00000375058,ENST00000375060,NM_014599,uc004dtl.1,uc004dtm.1,uc010nkc.1_5end | |||
|cluster_id=chrX:54834791..54834832,+ | |||
|description=CAGE_peak_3_at_MAGED2_5end | |||
|id=chrX:54834791..54834832,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.43e-14!180;CL:0000393!2.06e-11!60;CL:0000211!2.06e-11!60;CL:0000183!9.79e-11!59;CL:0000359!4.49e-10!32;CL:0000192!1.91e-09!42;CL:0000514!1.91e-09!42;CL:0000187!4.85e-09!54;CL:0000222!1.05e-08!119;CL:0000680!1.44e-08!57;CL:0000056!1.44e-08!57;CL:0000355!1.44e-08!57;CL:0000133!1.39e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.70e-09;32!CL:0000192;4.41e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.23e-11,61;CL:0000211,2.23e-11,61;CL:0000359,4.49e-10,32;CL:0000192,2.16e-09,43;CL:0000514,2.16e-09,43;CL:0000187,5.09e-09,55;CL:0000222,8.73e-09,121;CL:0000680,1.48e-08,58;CL:0000056,1.48e-08,58;CL:0000355,1.48e-08,58;CL:0000133,1.39e-07,59;CL:0002321,9.69e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;4.41e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;4.82e-12;41!UBERON:0001890;4.82e-12;41!UBERON:0000073;1.38e-11;53!UBERON:0002616;1.38e-11;53!UBERON:0001893;4.12e-11;34!UBERON:0002791;4.25e-11;32!UBERON:0001869;4.76e-11;32!UBERON:0003528;4.86e-11;34!UBERON:0002020;4.86e-11;34!UBERON:0001017;7.72e-10;75!UBERON:0000956;9.16e-10;25!UBERON:0000203;9.16e-10;25!UBERON:0000955;2.65e-09;68!UBERON:0002619;9.12e-09;22!UBERON:0001016;5.35e-08;83!UBERON:0001950;6.55e-08;20!UBERON:0001637;7.65e-08;42!UBERON:0003509;7.65e-08;42!UBERON:0004572;7.65e-08;42!UBERON:0004573;3.35e-07;33!UBERON:0004571;3.35e-07;33!UBERON:0002049;3.92e-07;75!UBERON:0007798;3.92e-07;75 | |||
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| ||
|short_description=p3@MAGED2 | |||
}} | }} |
Latest revision as of 01:26, 16 September 2015
Short description: | p3@MAGED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAGED2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000218439, ENST00000375058, ENST00000375060, NM_014599, uc004dtl.1, uc004dtm.1, uc010nkc.1_5end |
EntrezGene: | MAGED2 |
HGNC: | 16353 |
UniProt: | Q9UNF1Q5H907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.23e-11 | 61 |
electrically active cell | 2.23e-11 | 61 |
vascular associated smooth muscle cell | 4.49e-10 | 32 |
smooth muscle cell | 2.16e-09 | 43 |
smooth muscle myoblast | 2.16e-09 | 43 |
muscle cell | 5.09e-09 | 55 |
mesodermal cell | 8.73e-09 | 121 |
muscle precursor cell | 1.48e-08 | 58 |
myoblast | 1.48e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.48e-08 | 58 |
neurectodermal cell | 1.39e-07 | 59 |
embryonic cell | 9.69e-07 | 250 |