FFCP PHASE1:Hg19::chr6:21594845..21594908,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11200 | |||
|TSSclassifier=strong | |||
|UniProt=Q06945 | |||
|association_with_transcript=-69bp_to_X65661_5end | |||
|cluster_id=chr6:21594845..21594908,+ | |||
|description=CAGE_peak_6_at_SOX4_5end | |||
|id=chr6:21594845..21594908,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.69e-10!254;CL:0002321!2.08e-07!248;CL:0000220!3.26e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.68e-07;6!CL:0000404;2.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.21e-07,6;CL:0000031,3.21e-07,6;CL:0000404,3.21e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.68e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,1.49870366723688,0.563817616383885,1.0007329835313,2.23480547213644,0.872338524100369,0,1.26343974685366,0.261185628199839,1.22866968250754,0.697801167972428,0.873765488520689,1.05506791291381,0.618831764800233,1.98838425436749,2.01697543935533,2.41077811209591,0.730310090387373,1.46379839637152,0.246242116153576,0.816002764977012,0.313454721478088,0.572471974262113,1.50561867580173,1.12988375635323,0.840547463227464,0.57470412614962,0.944529375764151,0,0,0.619264493264304,0,0.90361775633475,0.739508020333575,0,0.142169232487422,0.587200878669695,0.553995408531877,0.200544447470142,0.868043482863407,0,0,0,0.145398238779565,0,0.727752183563449,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0.47296445977717,0.689491361473237,1.29096936716765,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0,0,0.329851300186716,0,0.426224750532694,0,0,0.622822248995575,0.502497330513487,0.521482918420201,0,0,0,0,0.211255286311942,0.212604299965044,0.209658645508376,1.34794357375794,2.10247649978109,0.803627933485401,0.855038231223746,1.19350006319454,0.547992461293902,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0,0,4.87613732627923,1.34140171940727,0.511450247374121,0.361439152384566,3.00802746381534,0.579386075843295,0.795285947051099,0.486634870302636,0.756278537312543,3.1042115644759,1.14185221401064,0.327447688744282,1.45718115317017,1.85392221392215,1.29818957461873,0.870648686496336,0.797747763113191,0.238490624305342,1.71598473234038,1.11437250398869,0.79504962946682,0.860234595106124,0.347140501607594,1.69592382577203,1.67799774483962,1.92582629358047,1.67195973229448,0,0.35576626268671,0.66944122552934,3.22263453687318,1.52054421143703,4.14905497831888,0.735326160691737,10.5318453224629,0.982297011124877,0.44905874525234,0.675668882899933,3.06633274931766,0.949265659568129,1.28241220751285,0,0,0.872188104285069,0,0.886413581652058,0.264818361626438,0.860509862246441,0.354668382198357,0.560677600142307,2.1349799145941,0.74000264525148,0.311211035399766,0.67355336034844,1.30769522490767,0.151357427644931,1.15235184896,0.234321431833797,1.24864030732128,0.570471821544449,0.747243402759005,0.23486899728753,0.809364721840658,0.140450806702248,0.61246251376468,0.491337269247072,0.103325781175765,4.75201142912821,2.96720315134268,0,0.718618141816238,0.505008341862199,0.500474079487857,0.277064115484183,0.877955241761676,0.612975591598039,1.35214253015937,0.340296549480063,0.358779271377724,0.640672166455702,0.211931901159562,0.900273288253207,0.515262646192195,0,0.744467425326359,0.337552664482532,0.974370051611986,0,0.184099797284599,0.969876340912871,0.710019185033229,0.10075209822764,0.339121184620975,1.15956511897978,1.09098448236334,1.14721838155602,1.95157929807353,0.530119073285941,3.36962434321603,2.59152637538426,1.26160425437814,0.72995471815166,0,1.28648187638577,0,0.464367928031979,0,1.65629520055781,1.68584690078102,1.20505514941741,1.8749975364507,1.74303555273925,1.18635309555548,1.07865046528132,0.588664395376038,0.769494313892781,2.95262181849859,0,0.4115740113314,0,0,0,0,2.6487785964879,2.21379189377604,0.857839051492628,1.31700342490351,0,0.502644862058154,0.370353780634118,0.651616610620649,0,0,0.811512834825538,0.234817388471643,1.01056513432752,1.38895653772983,1.71228737011138,0,1.71697232418975,0.246217006087397,0.936017060556951,0.743155811443641,0,0.839910640994298,1.55952606966625,0.179117045405697,0.581267877027924,0.383382679165211,0,1.67292024625129,5.39053100406007,3.31475892859011,3.02981840223312,0.253991577168676,0.763976851116555,3.51652341630141,1.71072446022705,0.719792448923265,0.901029173531752,0.857479297891735,0.336393253036082,0,0.2933531432838,0.517086863031111,0,2.535908257668,0.531876233169741,0,0.514414748524284,0,0,0,1.08524321078289,0.823240336780769,0,0.355391948742546,0.791951872933429,0.904318131178758,0.871533458600294,1.59956785891291,1.2162378064119,0,0,0.479249710983165,2.29723871668228,0,0.723906533337896,1.43833425785268,0,0,0,0,0,0.508189248444927,1.30139853857622,3.09315525111078,4.85797169469611,5.74144876487847,0,0,0,0.736148950314839,1.50051156317903,0.542530047399471,1.66376689224646,0,0.473107245101804,0.468565659970853,1.20378439891088,6.82222512167955,1.03473071292505,0,1.10621501125022,0.173767228936166,0.587403472388222,1.02943027143257,0.620304078368662,1.2942852049117,0.106727557803444,0,1.66435439510497,0,0.496215615637554,0.460385919864187,3.92924132206303,0.256278298511402,1.53512174720011,0.804269605718038,0,1.3878872442239,2.30830242907065,0.492762936082855,1.55776328755086,0.929683027679674,6.28469137876436,7.81975234182811,1.38121483403844,0.34444334449382,0.728364672026868,2.49136388422906,0.902399225814824,0.847168708148562,0,1.46139224653261,1.26661954671451,3.4120015221269,1.02056223165909,0.863663664408557,3.08454505380579,1.35473218771926,1.00337954770971,0.254876273045038,2.49322802678617,0.223874754722178,0,0,0,0.984043937099117,1.30151357865721,0.206082023295445,2.1060976908219,1.48517099857058,0,0.650060246036521,0,0.48335359146061,0.462145851343933,0.614014698904518,0.413509717453592,0,0.290033387828457,0.511359764496605,0.712256285173899,1.65284915360978,1.72971060628596,0.127612712494584,0.708104465988849,0.464845549297286,0.94443704049192,0.6970372701606,0.308033580176089,0.532306030317022,0,0.74129687641568,1.28812398067792,0,0.316379424718726,1.14378116354295,1.02359116524534,0.855877976067841,0.636406495851874,0.78494864019923,0.899362287916574,0.823611089208164,0.353437207037059,0,0,1.26377536871694,0.48763373908959,0.974853958525138,1.05650146756755,0.272999822815972,2.40389234321312,0,1.10273068709225,0.66343897524122,1.75380354101505,0,0.655894752046633,0.405820753925408,0.92947049429925,1.40847801266121,0.573645408816206,0.589494246078727,1.426684205925,0,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0.769776901804097,0.670302275535787,1.08890984861323,0.0941438007767792,1.72202149068492,0,1.7737206141467,1.37834040124176,1.01489521846434,0,1.70894156152249,0.476463550915578,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0.865615277858669,1.28055318027145,1.59426272728822,2.3949524571938,1.34053759092657,1.48171507906718,1.94773164164733,0.561594356226918,1.59764275323235,0.47003968731907,5.01268954180134,1.52362600021443,0.963528450622197,1.00899853595524,0.425846237690326,0.343505344755765,0.307240764308458,0.447352215784832,0.166849141711909,1.36771666781428,0,1.23087398947712,0.270455678475983,1.33228787199128,1.4098700508785,0.18714054040822,1.75809815126273,0.121360521749513,0.222886768554957,0.852408440419239,0.71623345421307,0.593929361665277,0.307160702099232,0,0.140669416410513,1.00177834520615,0.988823245360557,2.11125408127993,0,1.10513566212459,1.51159648712566,0.409074730008619,0.492339221844278,0.622079175323615,0.539210106883961,1.07412704805365,1.53471711068062,0.690503839458535,2.3948309234694,0,0,0.371072392647405,1.99613798001194,0.520855522170466,0.524759999977174,2.89999830173917,0.796554137998498,1.01701460117107,0.236387681767936,0.344743373241465,0.583209226766509,1.38899995946634,0,0.120596438625408,1.52581736317083,0.552896299656123,0,0,0.653630781113941,0.975966209950223,1.00035336054936,1.02547850262301,0.23056390438806,2.96200226552248,0.54323685961004,0.957003479195758,5.95384357112105,6.39641731222362,2.04386596391473,0.784901281975124,1.49590513710141,0,0,0,0.189753732724185,0.953619473882272,1.05499032264014,0.652931232636591,0.424059214301822,0.216388639742091,0,0.530745387020035,1.22206028986725,0.593042257361244,0.370691816839509,0.730953646538188,0,0.802577647298789,0.234264445725339,2.73682183823499,0.586993856796269,0,0,0,7.95789180239274,0.31593289814244,2.1045278718029,2.17745201934219,0,0.330991955875499,0.941798755221676,1.19472429772959,0,1.10939738410511,1.56203764501618,0.391969589657511,0.870592065804026,2.27144668714639,0,0.387025325156341,0.584714536689484,0.574808199372465,0.484945082442097,0,1.12990370390266,0.685209623233754,0.993573058514948,0,1.17330829640882,0.400794101257669,1.28071796843612,5.59466906829965,1.15272333723285,0.572682980829578,1.88754497648161,0.14405479798815,0.621262677827163,0.707082103850386,0.543616824294456,0.523014231561666,0.611989305817931,0.288950589901519,0,0,0,0.859530882839914,1.05154941711726,0.279282401272254,0.687481272035051,1.43574604915363,0.399358000997982,0,0.223171457441873,0.0671834724867263,1.08089965062721,1.16495949527454,0.157566364614447,0.164831716762333,0.202210631562555,0.984274815147488,0.423366660328922,0,0,3.21506296930038,3.43848591493084,5.40072439437941,0.449947783103001,0,0.121499113316049,1.34173875039706,0.0788057072991982,0.681909645754975,0.422401346077626,1.79287339332845,0.383830394638891,1.42939065274673,0.662091970365432,0.25426853765475,0,1.72844298240254,4.24563568142232,0,0.328370082997356,0.851940108927109,0.339936274560377,0.146552233678082,0,0,0,0.342173675768659,0,0.320362237703084,0,2.07119527673598,0.496166021811951,0,0,1.27668251554036,0,0.2506898940227,0.306345576763462,0.327872630709804,1.25643277000187,0,0,0.1251909307065,0,0.110929051536852,0,1.798532254171,0.37494122388632,0.606596470166591,0.856396000634902,0.941063278792687,2.81000943484129,3.4781046866598,0.597019211547496,0.934853239388898,1.10961172300523,0.947015026375446,0.50313580350515,0,0.228840068396924,0.604923695052956,1.39893480524502,0.73927574994817,0.159296767163702,1.34940933649081,0.621051827505038,1.65882483136342,0.53168342911599,1.5652351854352,0.601030435988874,1.90402606084398,0.406870733204662,0.545545977607678,0.537052785212442,1.39210127963548,0.398095888698616,0.400027764663154,0.686791410365586,0.673498977531838,0,0,0.214441591374926,1.04397716786085,1.13352962756136,1.62065732026684,0.489473409012935,1.96997725189636,0.926404341482917,1.97355644620836,0.353378291891762,0.771656153083659,0.675769762612291,1.53744911152768,1.38172136692479,1.51929978088691,0,0.194860308839388,0.664324201566815,0.163565394255844,1.63804924423206,1.47463745252232,0.211312123358627,1.39991177098451,0.533458648470704,1.37771983728653,0,0,0.139879507719444,0.622077260032973,0.76736622782191,0.107824811396682,0.471797825567689,0.873677105536111,0.509197589862076,1.91317428091515,0.495743057036009,0.558644917973244,0,1.97154362503133,0,0.705351887381368,3.3687002508852,0.0642292250964595,0,0,0.205116364240755,7.05800749420811,0,0,0,0.687034029507179,0.11796972334774,0.550285795565037,0.693153996902029,0,0,0.397832444232549,1.12815492523886,0,0.781514011233092,1.57144016688853,0,1.33070477595341,0.0675375846183947,0,0,0,4.92277328116398,0.548257766857182,0,1.05522746615772,1.78867398695433,1.07140367175657,0,0.606965604236632,0,0.266107110487916,0.345701962667338,0,0.135939465953663,0.0657727735628491,0.945550727071746,0.222462803784138,0.470958557103084,0.157115589916002,0.840816489941367,3.65263488203798,0.863710364874486,0,0.0714765441766563,1.10609528212909,0,0,0.801711364730253,0.62164849248911,1.19502933965765,0.691259661814092,1.29068207646083,0.236664001461131,0.255640214277473,0.423387050190929,1.14553434272025,0.62041277132864,0.955538938977433,1.67783147696688,0.392600934460972,0.975343399858155,0,0.410651227424988,2.3196288626764,2.4285549652957,0.701818390386317,9.35068643258431,1.66488127088596,1.01651473835064,0.549702583727146,1.66059127923341,0.848915739187391,1.09279780251979,7.99539403814589,0.490296643507811,1.41405928260976,0.196308467114945,0,0.8453114551668,0.679708458751268,0.281951753939561,0.386747327841463,0.0999411559249289,1.2498775702396,0,0.401206833445841,0,1.83491713361816,0,0.315543124386369,0.135982980381829,9.5997151874883,1.0580536810308,1.48798007266701,4.62175628631418,0.432626562123789,0.504665699340316,0.327796715891087,0.886889507080059,0.713921808193872,0.534434810531121,0.643264296743914,2.25636785363138,1.59135266258303,1.07185652062471,0,0,1.0661699095049,2.14257988317366,5.23170169671649,1.24149428591716,1.00918676322552,0.891060215894309,0.404234377916439,0.217716747896961,0.684466602170562,0.202056159043763,0.932388670104793,0.99798106963804,5.53542226554627,0.640364075266293,0,0.359300808426348,0,1.1001729976458,0.813792356631477,0.665756774185513,1.40891655513718,0.641136984606466 | |||
|short_description=p6@SOX4 | |||
}} |
Latest revision as of 03:50, 17 September 2015
Short description: | p6@SOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SOX4_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_X65661_5end |
EntrezGene: | SOX4 |
HGNC: | 11200 |
UniProt: | Q06945 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.21e-07 | 6 |
neuroblast | 3.21e-07 | 6 |
electrically signaling cell | 3.21e-07 | 6 |