FFCP PHASE1:Mm9::chr1:72898878..72898890,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:72898878..72898890,+|id=chr1:72898878..72898890,+|ontology_enrichment_celltype=CL:0002453!3.32e-07!8|ontology_enrichment_celltype_v019_2=CL:0002605,1.09e-22,2;CL:0002604,1.09e-22,2;CL:0000128,3.14e-08,6;CL:0000126,3.14e-08,6;CL:0000127,3.14e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.53e-09!22;UBERON:0007499!5.53e-09!22;UBERON:0006925!5.53e-09!22;UBERON:0009497!5.53e-09!22;UBERON:0000015!5.53e-09!22;UBERON:0002423!5.53e-09!22;UBERON:0006235!5.53e-09!22;UBERON:0008835!5.53e-09!22;UBERON:0003894!5.53e-09!22;UBERON:0004161!5.53e-09!22;UBERON:0008836!5.53e-09!22;UBERON:0009854!1.70e-08!23;UBERON:0009856!1.70e-08!23;UBERON:0002365!1.23e-07!25;UBERON:0002330!1.23e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.08e-18,22;UBERON:0007499,5.08e-18,22;UBERON:0006925,5.08e-18,22;UBERON:0009497,5.08e-18,22;UBERON:0000015,5.08e-18,22;UBERON:0002423,5.08e-18,22;UBERON:0006235,5.08e-18,22;UBERON:0008835,5.08e-18,22;UBERON:0003894,5.08e-18,22;UBERON:0004161,5.08e-18,22;UBERON:0008836,5.08e-18,22;UBERON:0009854,3.03e-17,23;UBERON:0009856,3.03e-17,23;UBERON:0002365,7.05e-16,25;UBERON:0002330,7.05e-16,25;UBERON:0005256,7.43e-09,45;UBERON:0003914,1.77e-08,47;UBERON:0005172,3.93e-08,49;UBERON:0005173,3.93e-08,49;UBERON:0002417,3.93e-08,49;UBERON:0000916,3.93e-08,49;UBERON:0003929,3.05e-07,55;UBERON:0001954,3.52e-07,7;UBERON:0003022,3.52e-07,7;UBERON:0002421,3.52e-07,7;UBERON:0000349,3.52e-07,7;UBERON:0002600,3.52e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.5378032791413,4.6663175777828,0.55994568650145,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.575392274901621,17.8348749452539,2.19649130550465,1.43768206527355,4.83783231969054,4.68056509671841,0.505157755894224,0.358794827043824,1.4473305640901,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr1:72898878..72898890,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=62 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:72898878..72898890,+ | |||
|description=CAGE_peak_at_chr1:72898878..72898890,+ | |||
|id=chr1:72898878..72898890,+ | |||
|ontology_enrichment_celltype=CL:0002453!3.32e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.09e-22,2;CL:0002604,1.09e-22,2;CL:0000128,3.14e-08,6;CL:0000126,3.14e-08,6;CL:0000127,3.14e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.53e-09!22;UBERON:0007499!5.53e-09!22;UBERON:0006925!5.53e-09!22;UBERON:0009497!5.53e-09!22;UBERON:0000015!5.53e-09!22;UBERON:0002423!5.53e-09!22;UBERON:0006235!5.53e-09!22;UBERON:0008835!5.53e-09!22;UBERON:0003894!5.53e-09!22;UBERON:0004161!5.53e-09!22;UBERON:0008836!5.53e-09!22;UBERON:0009854!1.70e-08!23;UBERON:0009856!1.70e-08!23;UBERON:0002365!1.23e-07!25;UBERON:0002330!1.23e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.08e-18,22;UBERON:0007499,5.08e-18,22;UBERON:0006925,5.08e-18,22;UBERON:0009497,5.08e-18,22;UBERON:0000015,5.08e-18,22;UBERON:0002423,5.08e-18,22;UBERON:0006235,5.08e-18,22;UBERON:0008835,5.08e-18,22;UBERON:0003894,5.08e-18,22;UBERON:0004161,5.08e-18,22;UBERON:0008836,5.08e-18,22;UBERON:0009854,3.03e-17,23;UBERON:0009856,3.03e-17,23;UBERON:0002365,7.05e-16,25;UBERON:0002330,7.05e-16,25;UBERON:0005256,7.43e-09,45;UBERON:0003914,1.77e-08,47;UBERON:0005172,3.93e-08,49;UBERON:0005173,3.93e-08,49;UBERON:0002417,3.93e-08,49;UBERON:0000916,3.93e-08,49;UBERON:0003929,3.05e-07,55;UBERON:0001954,3.52e-07,7;UBERON:0003022,3.52e-07,7;UBERON:0002421,3.52e-07,7;UBERON:0000349,3.52e-07,7;UBERON:0002600,3.52e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.5378032791413,4.6663175777828,0.55994568650145,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.575392274901621,17.8348749452539,2.19649130550465,1.43768206527355,4.83783231969054,4.68056509671841,0.505157755894224,0.358794827043824,1.4473305640901,0.184753190166605,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr1:72898878..72898890,+ | |||
}} |
Latest revision as of 23:21, 5 August 2015
Short description: | p@chr1:72898878..72898890, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72898878..72898890, + |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.09e-22 | 2 |
astrocyte of the hippocampus | 1.09e-22 | 2 |
oligodendrocyte | 3.14e-08 | 6 |
macroglial cell | 3.14e-08 | 6 |
astrocyte | 3.14e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 5.08e-18 | 22 |
epithelial sac | 5.08e-18 | 22 |
digestive gland | 5.08e-18 | 22 |
epithelium of foregut-midgut junction | 5.08e-18 | 22 |
anatomical boundary | 5.08e-18 | 22 |
hepatobiliary system | 5.08e-18 | 22 |
foregut-midgut junction | 5.08e-18 | 22 |
hepatic diverticulum | 5.08e-18 | 22 |
liver primordium | 5.08e-18 | 22 |
septum transversum | 5.08e-18 | 22 |
liver bud | 5.08e-18 | 22 |
digestive tract diverticulum | 3.03e-17 | 23 |
sac | 3.03e-17 | 23 |
exocrine gland | 7.05e-16 | 25 |
exocrine system | 7.05e-16 | 25 |
trunk mesenchyme | 7.43e-09 | 45 |
epithelial tube | 1.77e-08 | 47 |
abdomen element | 3.93e-08 | 49 |
abdominal segment element | 3.93e-08 | 49 |
abdominal segment of trunk | 3.93e-08 | 49 |
abdomen | 3.93e-08 | 49 |
gut epithelium | 3.05e-07 | 55 |
Ammon's horn | 3.52e-07 | 7 |
lobe parts of cerebral cortex | 3.52e-07 | 7 |
hippocampal formation | 3.52e-07 | 7 |
limbic system | 3.52e-07 | 7 |
limbic lobe | 3.52e-07 | 7 |