FFCP PHASE1:Hg19::chr6:86353787..86353803,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10492 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16918 | |||
|TSSclassifier=strong | |||
|UniProt=F6UXX1 | |||
|association_with_transcript=-277bp_to_ENST00000444272_5end | |||
|cluster_id=chr6:86353787..86353803,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_8_at_SYNCRIP_5end | |||
|id=chr6:86353787..86353803,- | |||
|ontology_enrichment_celltype=CL:0000945!3.58e-10!24;CL:0000826!3.58e-10!24;CL:0002087!4.12e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000236;8.33e-18;13!CL:0000945;5.65e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.41e-16,14;CL:0000945,5.74e-10,24;CL:0000826,5.74e-10,24 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.92e-21;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;7.50e-50;2!UBERON:0002046;4.92e-21;5!UBERON:0000974;2.10e-17;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,8.50e-50,2;UBERON:0002046,4.92e-21,5;UBERON:0004117,4.92e-21,5;UBERON:0007689,4.92e-21,5;UBERON:0007123,4.92e-21,5;UBERON:0003091,4.92e-21,5;UBERON:0000974,7.67e-11,10;UBERON:0009722,4.03e-10,11;UBERON:0007690,4.03e-10,11 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,1.93645405075148,0,0,0,0,0.918251677112708,0.962787081228281,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.419317291016752,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0.853460445133014,0.400395987036012,0,0,0,5.69212969109448,3.52342313622563,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0.335434687599266,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0.31020638566432,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,3.57096647195611,0.0645889098360061,0,0,8.78330784238676,25.6688829976938,0.217716747896961,0,0,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@SYNCRIP | |||
}} |
Latest revision as of 01:34, 20 September 2015
Short description: | p8@SYNCRIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SYNCRIP_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | -277bp_to_ENST00000444272_5end |
EntrezGene: | SYNCRIP |
HGNC: | 16918 |
UniProt: | F6UXX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.41e-16 | 14 |
lymphocyte of B lineage | 5.74e-10 | 24 |
pro-B cell | 5.74e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
throat | 8.50e-50 | 2 |
thyroid gland | 4.92e-21 | 5 |
pharyngeal pouch | 4.92e-21 | 5 |
thyroid diverticulum | 4.92e-21 | 5 |
pharyngeal pouch 2 | 4.92e-21 | 5 |
thyroid primordium | 4.92e-21 | 5 |
neck | 7.67e-11 | 10 |
entire pharyngeal arch endoderm | 4.03e-10 | 11 |
early pharyngeal endoderm | 4.03e-10 | 11 |