FFCP PHASE1:Mm9::chr2:146047829..146047847,+: Difference between revisions
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{{FFCP|EntrezGene=53626|HGNC=|MCL_coexpression_id=1241|UniProt=Q05BD7,Q63ZV0|association_with_transcript=96bp_to_NM_016889,uc008msh.2_5end|description=CAGE_peak_1_at_Insm1_5end|id=chr2:146047829..146047847,+|ontology_enrichment_celltype=CL:0000540!3.01e-14!33;CL:0000047!3.01e-14!33;CL:0000031!3.01e-14!33;CL:0000404!3.01e-14!33;CL:0002319!9.44e-13!43;CL:0000221!1.24e-12!44;CL:0000133!1.24e-12!44;CL:0000393!3.65e-09!39;CL:0000211!3.65e-09!39;CL:0000117!1.34e-08!23;CL:0000337!1.34e-08!23;CL:0000055!4.12e-08!50;CL:0000107!4.71e-07!9|ontology_enrichment_celltype_v019_2=CL:0000540,9.65e-16,33;CL:0000047,9.65e-16,33;CL:0000031,9.65e-16,33;CL:0000404,9.65e-16,33;CL:0002319,3.68e-13,43;CL:0000221,4.86e-13,44;CL:0000133,4.86e-13,44;CL:0000393,5.00e-11,39;CL:0000211,5.00e-11,39;CL:0000117,1.98e-09,23;CL:0000337,1.98e-09,23;CL:0000107,1.05e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.05e-18!102;UBERON:0000924!1.05e-18!102;UBERON:0006601!1.05e-18!102;UBERON:0001017!1.72e-16!73;UBERON:0005743!1.72e-16!73;UBERON:0002346!2.69e-16!71;UBERON:0003075!2.69e-16!71;UBERON:0007284!2.69e-16!71;UBERON:0000073!4.50e-16!75;UBERON:0001016!4.50e-16!75;UBERON:0003056!4.25e-13!49;UBERON:0000033!1.05e-11!63;UBERON:0002780!5.53e-09!39;UBERON:0001890!5.53e-09!39;UBERON:0006240!5.53e-09!39;UBERON:0003080!6.91e-09!40;UBERON:0000955!9.10e-09!50;UBERON:0006238!9.10e-09!50;UBERON:0007811!1.07e-08!86;UBERON:0002616!1.89e-08!49;UBERON:0001049!3.35e-08!52;UBERON:0005068!3.35e-08!52;UBERON:0006241!3.35e-08!52;UBERON:0007135!3.35e-08!52;UBERON:0002410!4.71e-07!9;UBERON:0000153!9.43e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.49e-15,73;UBERON:0001016,2.79e-14,75;UBERON:0004121,3.89e-14,95;UBERON:0000924,3.89e-14,95;UBERON:0006601,3.89e-14,95;UBERON:0003056,5.23e-13,49;UBERON:0002346,1.49e-12,64;UBERON:0003075,1.49e-12,64;UBERON:0007284,1.49e-12,64;UBERON:0010371,1.27e-09,73;UBERON:0002780,1.39e-08,39;UBERON:0001890,1.39e-08,39;UBERON:0006240,1.39e-08,39;UBERON:0003080,1.70e-08,40;UBERON:0002410,1.05e-07,9;UBERON:0000073,1.10e-07,54;UBERON:0010314,1.21e-07,92;UBERON:0000955,4.40e-07,47;UBERON:0006238,4.40e-07,47;UBERON:0001049,8.32e-07,52;UBERON:0005068,8.32e-07,52;UBERON:0006241,8.32e-07,52;UBERON:0007135,8.32e-07,52;UBERON:0002616,9.16e-07,46|phase1_expression=4.64431656603902,0.348975407639361,0,0,0.500895729946347,20.8170297170743,22.1932008565749,0.258246646883153,0,0,0,0,0,0,0,0,0,0.315462165358238,0.548457734422955,0,0.680346321208558,0.0992909512008853,0.261199789138935,4.15980299262857,3.67054849707472,0.57423196411502,0,6.46413698057667,2.85035129184561,4.53654233567875,7.09537634096975,0,0,0,4.62162591602039,3.15845826181135,1.02084678131185,0,0,0,0,0,0.485510353031154,0,0,0,0.782391344348039,87.2100625521786,0,0,8.9591309840232,1.43752564364972,0,0,0,0,0,0,51.1860645974782,43.9062512795787,41.8328726314078,0.338844532069132,0,0,0,0,3.29560121570245,6.91592949578798,128.886188099438,152.016686561484,145.544873255156,1.99955689082663,1.10434270475807,96.5227497813838,100.925280982203,120.417661045913,4.40463523997555,4.21368215681119,3.68655679814984,41.9398394982016,39.0652238182289,34.3802824567462,3.07101298901519,3.37657566019008,2.75036845998258,2.94628585473668,1.99320353118744,11.7431650869939,0.681535739998656,0.377857800533928,0,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0,0,0,1.40843419776681,0,0,0,0,0,0,0.45673551887624,1.29468941823586,7.57054909230606,22.5530924795977,14.3098774806706,5.30415643688935,5.27529241934179,6.23220147819235,4.52399728786832,0.741584903203122,0,0,0,0,0,0,0,0.209446706813455,2.29911349687732,0.239630249011841,0,0,1.19832511523858,4.57500602818627,23.8743269014442,1.21677024134594,1.27857728665165,1.24672826735736,2.27137768294861,0,0,0,4.62972082950243,18.3469824577412,33.565707247287,36.0124259610698,30.8944876563216,50.9593378643446,56.7543780861885,80.4897813968071,18.8853460639481,0,0.189106080167819,0.351902248327898,0,0,0,0.205782136407943,0.796137067273973,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,49.6000231668151,1.65209391491899,4.23120906661671,6.61193576659225,8.59275685883622,7.34544529535932,3.02525286935014,6.22658522765637,3.61428689613862,1.89811624617805,3.12928013975621,1.75934646160189,1.59165177632921,2.72949721966768,2.69645822596266,2.37751854862164,1.7922714592893,0.948339504765408,1.02823661348756,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,1.89491411770485,0.814824882210129,0.509235257325564,0.704070744865506,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0.252470927204373,76.0374808793179,57.7849341559025,106.634581877735,33.2166629154047,37.875774594007,47.8399337033127,87.8439222634521,69.2646383249809,75.1046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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53626 | |||
|HGNC= | |||
|MCL_coexpression_id=1241 | |||
|TSSclassifier=NA | |||
|UniProt=Q05BD7,Q63ZV0 | |||
|association_with_transcript=96bp_to_NM_016889,uc008msh.2_5end | |||
|cluster_id=chr2:146047829..146047847,+ | |||
|description=CAGE_peak_1_at_Insm1_5end | |||
|id=chr2:146047829..146047847,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.01e-14!33;CL:0000047!3.01e-14!33;CL:0000031!3.01e-14!33;CL:0000404!3.01e-14!33;CL:0002319!9.44e-13!43;CL:0000221!1.24e-12!44;CL:0000133!1.24e-12!44;CL:0000393!3.65e-09!39;CL:0000211!3.65e-09!39;CL:0000117!1.34e-08!23;CL:0000337!1.34e-08!23;CL:0000055!4.12e-08!50;CL:0000107!4.71e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.65e-16,33;CL:0000047,9.65e-16,33;CL:0000031,9.65e-16,33;CL:0000404,9.65e-16,33;CL:0002319,3.68e-13,43;CL:0000221,4.86e-13,44;CL:0000133,4.86e-13,44;CL:0000393,5.00e-11,39;CL:0000211,5.00e-11,39;CL:0000117,1.98e-09,23;CL:0000337,1.98e-09,23;CL:0000107,1.05e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.05e-18!102;UBERON:0000924!1.05e-18!102;UBERON:0006601!1.05e-18!102;UBERON:0001017!1.72e-16!73;UBERON:0005743!1.72e-16!73;UBERON:0002346!2.69e-16!71;UBERON:0003075!2.69e-16!71;UBERON:0007284!2.69e-16!71;UBERON:0000073!4.50e-16!75;UBERON:0001016!4.50e-16!75;UBERON:0003056!4.25e-13!49;UBERON:0000033!1.05e-11!63;UBERON:0002780!5.53e-09!39;UBERON:0001890!5.53e-09!39;UBERON:0006240!5.53e-09!39;UBERON:0003080!6.91e-09!40;UBERON:0000955!9.10e-09!50;UBERON:0006238!9.10e-09!50;UBERON:0007811!1.07e-08!86;UBERON:0002616!1.89e-08!49;UBERON:0001049!3.35e-08!52;UBERON:0005068!3.35e-08!52;UBERON:0006241!3.35e-08!52;UBERON:0007135!3.35e-08!52;UBERON:0002410!4.71e-07!9;UBERON:0000153!9.43e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.49e-15,73;UBERON:0001016,2.79e-14,75;UBERON:0004121,3.89e-14,95;UBERON:0000924,3.89e-14,95;UBERON:0006601,3.89e-14,95;UBERON:0003056,5.23e-13,49;UBERON:0002346,1.49e-12,64;UBERON:0003075,1.49e-12,64;UBERON:0007284,1.49e-12,64;UBERON:0010371,1.27e-09,73;UBERON:0002780,1.39e-08,39;UBERON:0001890,1.39e-08,39;UBERON:0006240,1.39e-08,39;UBERON:0003080,1.70e-08,40;UBERON:0002410,1.05e-07,9;UBERON:0000073,1.10e-07,54;UBERON:0010314,1.21e-07,92;UBERON:0000955,4.40e-07,47;UBERON:0006238,4.40e-07,47;UBERON:0001049,8.32e-07,52;UBERON:0005068,8.32e-07,52;UBERON:0006241,8.32e-07,52;UBERON:0007135,8.32e-07,52;UBERON:0002616,9.16e-07,46 | |||
|phase1_expression=4.64431656603902,0.348975407639361,0,0,0.500895729946347,20.8170297170743,22.1932008565749,0.258246646883153,0,0,0,0,0,0,0,0,0,0.315462165358238,0.548457734422955,0,0.680346321208558,0.0992909512008853,0.261199789138935,4.15980299262857,3.67054849707472,0.57423196411502,0,6.46413698057667,2.85035129184561,4.53654233567875,7.09537634096975,0,0,0,4.62162591602039,3.15845826181135,1.02084678131185,0,0,0,0,0,0.485510353031154,0,0,0,0.782391344348039,87.2100625521786,0,0,8.9591309840232,1.43752564364972,0,0,0,0,0,0,51.1860645974782,43.9062512795787,41.8328726314078,0.338844532069132,0,0,0,0,3.29560121570245,6.91592949578798,128.886188099438,152.016686561484,145.544873255156,1.99955689082663,1.10434270475807,96.5227497813838,100.925280982203,120.417661045913,4.40463523997555,4.21368215681119,3.68655679814984,41.9398394982016,39.0652238182289,34.3802824567462,3.07101298901519,3.37657566019008,2.75036845998258,2.94628585473668,1.99320353118744,11.7431650869939,0.681535739998656,0.377857800533928,0,0,0.679971333707751,0,0.649776417447669,0,0.561777680527007,0,0,0,1.40843419776681,0,0,0,0,0,0,0.45673551887624,1.29468941823586,7.57054909230606,22.5530924795977,14.3098774806706,5.30415643688935,5.27529241934179,6.23220147819235,4.52399728786832,0.741584903203122,0,0,0,0,0,0,0,0.209446706813455,2.29911349687732,0.239630249011841,0,0,1.19832511523858,4.57500602818627,23.8743269014442,1.21677024134594,1.27857728665165,1.24672826735736,2.27137768294861,0,0,0,4.62972082950243,18.3469824577412,33.565707247287,36.0124259610698,30.8944876563216,50.9593378643446,56.7543780861885,80.4897813968071,18.8853460639481,0,0.189106080167819,0.351902248327898,0,0,0,0.205782136407943,0.796137067273973,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,49.6000231668151,1.65209391491899,4.23120906661671,6.61193576659225,8.59275685883622,7.34544529535932,3.02525286935014,6.22658522765637,3.61428689613862,1.89811624617805,3.12928013975621,1.75934646160189,1.59165177632921,2.72949721966768,2.69645822596266,2.37751854862164,1.7922714592893,0.948339504765408,1.02823661348756,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.184753190166605,1.89491411770485,0.814824882210129,0.509235257325564,0.704070744865506,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.327726629431476,0.518054945597687,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0.252470927204373,76.0374808793179,57.7849341559025,106.634581877735,33.2166629154047,37.875774594007,47.8399337033127,87.8439222634521,69.2646383249809,75.1046778098395,7.06906896127976,0.141940085208269,0.178065603667255,0,0,7.96470830039777,30.3475795193727,19.6510312027088,13.2023555829129,17.4228116799656,13.8345816574767,3.35956781118687,7.27067458955011,5.34746067577082,3.16036757935816,1.05418608574999,0,29.9586853063333,28.449652856947,41.653496178047,52.7269106177717,65.7932266812835,50.3000065637839,39.8208629857133,46.8876021636483,0,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0.477489376012546,0.164140899745061,2.62332752966866,0.556275906031529,0.512612642393558,0.82554747185289,0,0.376736914009382,0.136694227721025,0,0,0.559805809294632,0,3.81868247206045,7.27572785236611,8.13277868507395,3.88819226958485,2.09088296014469,1.09181281873089,0.674321731924103,1.65306911450672,2.09404753587224,1.42576470620972,0,0,0.299033092087958,0.165458490457098,0,0,0,0,0,0,0,0,6.00421129193539,2.63542779877213,3.59488350076895,6.49604114888975,5.01274747868948,3.9736270956253,2.04332264183947,2.51072196196781,1.9183625490148,1.06689529317,2.01652370273681,2.14407337627455,2.5977197242889,3.50630706544707,0,3.99574716073316,5.47254525317802,1.17519231454855,0,0.375364950902364,0,0,0.501572104035363,2.82375921308533,0.920650473014354,1.14579102687879,2.57779773515531,0.685082519770642,3.0215755895588,0.675022500231806,0.900642406448441,3.17199686288943,3.10656187051092,22.8332164685189,38.306387846499,14.1708892775931,9.23805524859517,11.947950269795,8.45680138870065,5.55616819504038,7.62329711783909,7.06022261101994,5.05394423527595,5.83002389747551,5.28153755881013,4.68207537349412,4.9939618875798,4.65227298540468,3.81034953026459,6.48952225291191,3.8581844092741,5.35711671044299,6.77115032618228,4.11443102862498,5.85670160325814,6.67621331852499,4.21504608233753,5.55245344450451,5.24610568928394,4.75612729469209,3.94604567156764,5.29636043998861,4.48913817326191,5.33857581558784,6.40279135441163,4.91077251803627,4.95797891795091,4.05103883060397,17.2369298777183,3.04111090979031,4.51229213501426,0.956441660344217,0,0.463735671240843 | |||
|short_description=p1@Insm1 | |||
}} |
Latest revision as of 20:44, 25 September 2015
Short description: | p1@Insm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Insm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1241 |
Association with transcript: | 96bp_to_NM_016889, uc008msh.2_5end |
EntrezGene: | Insm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.65e-16 | 33 |
neuronal stem cell | 9.65e-16 | 33 |
neuroblast | 9.65e-16 | 33 |
electrically signaling cell | 9.65e-16 | 33 |
neural cell | 3.68e-13 | 43 |
ectodermal cell | 4.86e-13 | 44 |
neurectodermal cell | 4.86e-13 | 44 |
electrically responsive cell | 5.00e-11 | 39 |
electrically active cell | 5.00e-11 | 39 |
CNS neuron (sensu Vertebrata) | 1.98e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.98e-09 | 23 |
autonomic neuron | 1.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.49e-15 | 73 |
nervous system | 2.79e-14 | 75 |
ectoderm-derived structure | 3.89e-14 | 95 |
ectoderm | 3.89e-14 | 95 |
presumptive ectoderm | 3.89e-14 | 95 |
pre-chordal neural plate | 5.23e-13 | 49 |
neurectoderm | 1.49e-12 | 64 |
neural plate | 1.49e-12 | 64 |
presumptive neural plate | 1.49e-12 | 64 |
ecto-epithelium | 1.27e-09 | 73 |
regional part of forebrain | 1.39e-08 | 39 |
forebrain | 1.39e-08 | 39 |
future forebrain | 1.39e-08 | 39 |
anterior neural tube | 1.70e-08 | 40 |
autonomic nervous system | 1.05e-07 | 9 |
regional part of nervous system | 1.10e-07 | 54 |
structure with developmental contribution from neural crest | 1.21e-07 | 92 |
brain | 4.40e-07 | 47 |
future brain | 4.40e-07 | 47 |
neural tube | 8.32e-07 | 52 |
neural rod | 8.32e-07 | 52 |
future spinal cord | 8.32e-07 | 52 |
neural keel | 8.32e-07 | 52 |
regional part of brain | 9.16e-07 | 46 |