FFCP PHASE1:Mm9::chr2:164658362..164658378,+: Difference between revisions
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{{FFCP|EntrezGene=19025|HGNC=|UniProt=G3X8T3,P16675,Q544R6,Q9D2D1|association_with_transcript=0bp_to_ENSMUST00000017904,ENSMUST00000103093,NM_001038492,NM_008906,uc008nwl.1,uc008nwm.1_5end|description=CAGE_peak_4_at_Ctsa_5end|id=chr2:164658362..164658378,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!6.31e-16!122;UBERON:0000025!1.51e-14!114;UBERON:0003914!7.84e-12!47;UBERON:0004535!8.25e-10!23;UBERON:0001009!8.25e-10!23;UBERON:0000955!3.02e-09!50;UBERON:0006238!3.02e-09!50;UBERON:0007100!5.34e-09!18;UBERON:0000948!5.34e-09!18;UBERON:0005498!5.34e-09!18;UBERON:0004140!5.34e-09!18;UBERON:0009881!5.34e-09!18;UBERON:0004141!5.34e-09!18;UBERON:0003084!5.34e-09!18;UBERON:0007005!5.34e-09!18;UBERON:0004139!5.34e-09!18;UBERON:0004291!5.34e-09!18;UBERON:0000073!6.04e-09!75;UBERON:0001016!6.04e-09!75;UBERON:0001017!8.50e-09!73;UBERON:0005743!8.50e-09!73;UBERON:0002616!9.32e-09!49;UBERON:0004121!1.35e-08!102;UBERON:0000924!1.35e-08!102;UBERON:0006601!1.35e-08!102;UBERON:0000033!3.27e-08!63;UBERON:0001049!4.66e-08!52;UBERON:0005068!4.66e-08!52;UBERON:0006241!4.66e-08!52;UBERON:0007135!4.66e-08!52;UBERON:0003080!2.56e-07!40;UBERON:0002780!6.50e-07!39;UBERON:0001890!6.50e-07!39;UBERON:0006240!6.50e-07!39;UBERON:0002346!9.85e-07!71;UBERON:0003075!9.85e-07!71;UBERON:0007284!9.85e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.93e-16,122;UBERON:0000025,1.66e-14,114;UBERON:0010314,1.09e-13,92;UBERON:0003914,7.78e-12,47;UBERON:0004535,8.19e-10,23;UBERON:0001009,8.19e-10,23;UBERON:0007100,5.31e-09,18;UBERON:0000948,5.31e-09,18;UBERON:0005498,5.31e-09,18;UBERON:0004140,5.31e-09,18;UBERON:0009881,5.31e-09,18;UBERON:0004141,5.31e-09,18;UBERON:0003084,5.31e-09,18;UBERON:0007005,5.31e-09,18;UBERON:0004139,5.31e-09,18;UBERON:0004291,5.31e-09,18;UBERON:0001016,6.00e-09,75;UBERON:0001017,8.45e-09,73;UBERON:0000073,1.50e-08,54;UBERON:0000955,2.78e-08,47;UBERON:0006238,2.78e-08,47;UBERON:0001049,4.64e-08,52;UBERON:0005068,4.64e-08,52;UBERON:0006241,4.64e-08,52;UBERON:0007135,4.64e-08,52;UBERON:0002616,8.28e-08,46;UBERON:0004121,8.89e-08,95;UBERON:0000924,8.89e-08,95;UBERON:0006601,8.89e-08,95;UBERON:0003080,2.55e-07,40;UBERON:0002780,6.47e-07,39;UBERON:0001890,6.47e-07,39;UBERON:0006240,6.47e-07,39|phase1_expression=4.96461426024861,0.697950815278722,1.36499771816861,0.90739263392049,1.50268718983904,2.01455126294268,0.934450562382103,1.16210991097419,0.140788722151667,0.468129052643987,1.19852577757853,0.8774937489487,1.88320802924326,1.92324885321794,1.33243904726265,1.82227740650843,0.699561878128147,1.41957974411207,2.19383093769182,0.84877930359606,3.14660173558958,1.48936426801328,3.39559725880616,1.43993180514066,0.68822784320151,1.14846392823004,3.01533397311352,1.72376986148711,1.14014051673824,0.756090389279792,0.665191531965914,0.635030673459631,2.46025915033828,0,1.73310971850765,2.32728503501889,4.28755648150975,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0,9.19046771221714,8.11015449756117,9.17733760808408,8.60630478782843,1.96222640742402,3.51497892375155,4.27745777963423,2.51975558925653,2.87505128729943,1.17447824240415,1.45072428402269,1.68046899571232,5.14518872071894,5.73066879877513,10.3134418455488,2.83243045203437,5.28990979272033,3.1691570175309,5.42151251310611,5.33576877666684,12.1486461832989,14.8329954385046,12.0781619540837,9.88680364710736,6.14749288514487,2.7996195323289,3.91517221161903,1.68259969081106,3.42781181284564,4.8591079009355,3.06226998037385,3.64212789869298,4.5960939330501,6.60695285996332,5.87361755191863,6.75868746327471,4.87979264601717,3.20206752608434,2.6045668527838,6.14202597803038,8.4414391504752,5.34793867218835,5.89257170947335,1.42371680799103,3.72798891650601,3.93776205332557,4.30757892608677,1.73918693221007,6.0229671388697,4.0798280022465,7.01614149129162,12.3457519315057,8.51251085484938,8.84799846830037,2.04516387093669,1.03914401841148,2.12003744706204,2.81686839553361,2.56652954828636,2.54805239706646,0,1.94841936910093,1.01343946190039,1.51657333504435,4.11061966988616,1.55362730188303,5.64080128446334,2.77576522825817,3.34912026143355,4.15107895060905,4.37095657602605,5.52666923537813,7.41432888845085,3.46072954828123,5.35017620603673,1.76922110389975,4.85300549842228,3.3126227769059,3.87900202508178,3.72783522436244,3.51336956413857,3.35114730901528,2.29911349687732,1.31796636956512,1.79970819298022,0.889491589511453,8.08869452786043,11.8950156732843,8.67015029578764,6.60532416730651,12.0186264945255,7.68815764870372,6.65189178577806,3.7680564624617,3.73220911830279,1.76905930903572,4.41927897361595,2.21204753036596,2.29902104433473,2.88099407688559,2.56198190320716,2.24520447199382,3.07472928683639,2.43624483855295,4.65666067330228,1.07783996466421,1.32374256117473,2.63926686245923,3.72632745126877,2.22437799380478,3.48252166522167,4.7329891373827,1.99034266818493,2.80885274925294,1.54408744268829,2.27330799516474,5.178144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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19025 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=G3X8T3,P16675,Q544R6,Q9D2D1 | |||
|association_with_transcript=0bp_to_ENSMUST00000017904,ENSMUST00000103093,NM_001038492,NM_008906,uc008nwl.1,uc008nwm.1_5end | |||
|cluster_id=chr2:164658362..164658378,+ | |||
|description=CAGE_peak_4_at_Ctsa_5end | |||
|id=chr2:164658362..164658378,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!6.31e-16!122;UBERON:0000025!1.51e-14!114;UBERON:0003914!7.84e-12!47;UBERON:0004535!8.25e-10!23;UBERON:0001009!8.25e-10!23;UBERON:0000955!3.02e-09!50;UBERON:0006238!3.02e-09!50;UBERON:0007100!5.34e-09!18;UBERON:0000948!5.34e-09!18;UBERON:0005498!5.34e-09!18;UBERON:0004140!5.34e-09!18;UBERON:0009881!5.34e-09!18;UBERON:0004141!5.34e-09!18;UBERON:0003084!5.34e-09!18;UBERON:0007005!5.34e-09!18;UBERON:0004139!5.34e-09!18;UBERON:0004291!5.34e-09!18;UBERON:0000073!6.04e-09!75;UBERON:0001016!6.04e-09!75;UBERON:0001017!8.50e-09!73;UBERON:0005743!8.50e-09!73;UBERON:0002616!9.32e-09!49;UBERON:0004121!1.35e-08!102;UBERON:0000924!1.35e-08!102;UBERON:0006601!1.35e-08!102;UBERON:0000033!3.27e-08!63;UBERON:0001049!4.66e-08!52;UBERON:0005068!4.66e-08!52;UBERON:0006241!4.66e-08!52;UBERON:0007135!4.66e-08!52;UBERON:0003080!2.56e-07!40;UBERON:0002780!6.50e-07!39;UBERON:0001890!6.50e-07!39;UBERON:0006240!6.50e-07!39;UBERON:0002346!9.85e-07!71;UBERON:0003075!9.85e-07!71;UBERON:0007284!9.85e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.93e-16,122;UBERON:0000025,1.66e-14,114;UBERON:0010314,1.09e-13,92;UBERON:0003914,7.78e-12,47;UBERON:0004535,8.19e-10,23;UBERON:0001009,8.19e-10,23;UBERON:0007100,5.31e-09,18;UBERON:0000948,5.31e-09,18;UBERON:0005498,5.31e-09,18;UBERON:0004140,5.31e-09,18;UBERON:0009881,5.31e-09,18;UBERON:0004141,5.31e-09,18;UBERON:0003084,5.31e-09,18;UBERON:0007005,5.31e-09,18;UBERON:0004139,5.31e-09,18;UBERON:0004291,5.31e-09,18;UBERON:0001016,6.00e-09,75;UBERON:0001017,8.45e-09,73;UBERON:0000073,1.50e-08,54;UBERON:0000955,2.78e-08,47;UBERON:0006238,2.78e-08,47;UBERON:0001049,4.64e-08,52;UBERON:0005068,4.64e-08,52;UBERON:0006241,4.64e-08,52;UBERON:0007135,4.64e-08,52;UBERON:0002616,8.28e-08,46;UBERON:0004121,8.89e-08,95;UBERON:0000924,8.89e-08,95;UBERON:0006601,8.89e-08,95;UBERON:0003080,2.55e-07,40;UBERON:0002780,6.47e-07,39;UBERON:0001890,6.47e-07,39;UBERON:0006240,6.47e-07,39 | |||
|phase1_expression=4.96461426024861,0.697950815278722,1.36499771816861,0.90739263392049,1.50268718983904,2.01455126294268,0.934450562382103,1.16210991097419,0.140788722151667,0.468129052643987,1.19852577757853,0.8774937489487,1.88320802924326,1.92324885321794,1.33243904726265,1.82227740650843,0.699561878128147,1.41957974411207,2.19383093769182,0.84877930359606,3.14660173558958,1.48936426801328,3.39559725880616,1.43993180514066,0.68822784320151,1.14846392823004,3.01533397311352,1.72376986148711,1.14014051673824,0.756090389279792,0.665191531965914,0.635030673459631,2.46025915033828,0,1.73310971850765,2.32728503501889,4.28755648150975,0.418531630736908,0,0.523523743973798,0,1.36609096991689,0,9.19046771221714,8.11015449756117,9.17733760808408,8.60630478782843,1.96222640742402,3.51497892375155,4.27745777963423,2.51975558925653,2.87505128729943,1.17447824240415,1.45072428402269,1.68046899571232,5.14518872071894,5.73066879877513,10.3134418455488,2.83243045203437,5.28990979272033,3.1691570175309,5.42151251310611,5.33576877666684,12.1486461832989,14.8329954385046,12.0781619540837,9.88680364710736,6.14749288514487,2.7996195323289,3.91517221161903,1.68259969081106,3.42781181284564,4.8591079009355,3.06226998037385,3.64212789869298,4.5960939330501,6.60695285996332,5.87361755191863,6.75868746327471,4.87979264601717,3.20206752608434,2.6045668527838,6.14202597803038,8.4414391504752,5.34793867218835,5.89257170947335,1.42371680799103,3.72798891650601,3.93776205332557,4.30757892608677,1.73918693221007,6.0229671388697,4.0798280022465,7.01614149129162,12.3457519315057,8.51251085484938,8.84799846830037,2.04516387093669,1.03914401841148,2.12003744706204,2.81686839553361,2.56652954828636,2.54805239706646,0,1.94841936910093,1.01343946190039,1.51657333504435,4.11061966988616,1.55362730188303,5.64080128446334,2.77576522825817,3.34912026143355,4.15107895060905,4.37095657602605,5.52666923537813,7.41432888845085,3.46072954828123,5.35017620603673,1.76922110389975,4.85300549842228,3.3126227769059,3.87900202508178,3.72783522436244,3.51336956413857,3.35114730901528,2.29911349687732,1.31796636956512,1.79970819298022,0.889491589511453,8.08869452786043,11.8950156732843,8.67015029578764,6.60532416730651,12.0186264945255,7.68815764870372,6.65189178577806,3.7680564624617,3.73220911830279,1.76905930903572,4.41927897361595,2.21204753036596,2.29902104433473,2.88099407688559,2.56198190320716,2.24520447199382,3.07472928683639,2.43624483855295,4.65666067330228,1.07783996466421,1.32374256117473,2.63926686245923,3.72632745126877,2.22437799380478,3.48252166522167,4.7329891373827,1.99034266818493,2.80885274925294,1.54408744268829,2.27330799516474,5.17814431338755,7.73935997937617,7.56260658136262,9.2330446878232,7.08351234290654,7.0962871928194,7.90615412151387,6.9751084363901,5.60473643362414,6.91151369636618,7.05920095540109,8.18794976413143,10.9649990568999,10.9775057645525,10.8707199195901,7.78072809687271,4.21908910755066,1.65209391491899,1.32225283331772,4.05247676016945,2.55460339046482,2.96395161040815,7.46229041106367,5.55945109612176,9.89173255785308,2.84717436926707,6.75265714368445,4.77536896720512,7.95825888164603,5.06906626509712,0.898819408654221,2.16138049874694,2.58883655230677,2.65535061334314,1.82797620175566,1.1270773567308,3.25842124552503,4.65485969202302,4.83937157243198,5.69128834118316,6.19962621514329,7.84993639206874,8.39100714668244,9.19003143970162,4.50481785433454,2.35870794135844,2.69834534861824,1.42002084971952,5.788251834058,3.8193877767213,6.32931502391783,3.89124544260085,4.3929826110093,4.31304619582064,8.18710084870708,4.36852742360385,8.08252409430758,6.09951205974501,8.20153986317724,2.95605104266567,2.84237117655727,0.977789858652155,1.18821560042632,2.11221223459652,2.1775813467436,2.61848004974615,1.95133647857799,2.04925687338048,1.32878813789265,1.75400245523236,1.96635977658886,2.24490476425664,2.16973587872267,4.52373851817817,2.71952841909355,2.95058563811422,4.13905119457099,6.26147300952389,7.61875962849321,1.3114795630134,11.6136626514012,3.15508219416257,3.51394869866975,1.07711698866399,3.10659437338318,4.45597348164788,2.83076530788832,4.85772842009873,3.50707029493574,2.37172666767914,9.63963949265421,6.10342366395555,4.62970569534864,2.93196526836437,5.77395430403874,3.98235415019888,2.18502572539483,2.72091201268276,3.01768127609437,3.83892460745005,3.3817866273832,2.06742634534577,2.18120237686503,4.27796854061666,1.8962205476149,4.21674434299995,5.15677716240934,5.44703369206061,2.70091641046965,4.78627129996192,3.64372959553707,3.54680467284547,4.8159580752559,4.60737257685939,2.13125464380219,2.81606049676452,3.1774810629573,6.83638033970382,2.80306630000516,3.06782410722221,2.47282992205439,3.46179797609096,3.93938159388147,3.49777003955821,9.08583979851498,1.53783792718067,3.09580301944834,0.925972636848558,2.0720530270516,2.32380187125743,2.74533807847827,3.22959016988325,2.09927178485487,2.48759952847963,1.90934123603023,2.53068794864908,3.04979200690273,3.13215488383224,3.13632444021703,2.4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| |||
|short_description=p4@Ctsa | |||
}} |
Latest revision as of 03:34, 26 September 2015
Short description: | p4@Ctsa |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ctsa_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000017904, ENSMUST00000103093, NM_001038492, NM_008906, uc008nwl.1, uc008nwm.1_5end |
EntrezGene: | Ctsa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 6.93e-16 | 122 |
tube | 1.66e-14 | 114 |
structure with developmental contribution from neural crest | 1.09e-13 | 92 |
epithelial tube | 7.78e-12 | 47 |
cardiovascular system | 8.19e-10 | 23 |
circulatory system | 8.19e-10 | 23 |
primary circulatory organ | 5.31e-09 | 18 |
heart | 5.31e-09 | 18 |
primitive heart tube | 5.31e-09 | 18 |
primary heart field | 5.31e-09 | 18 |
anterior lateral plate mesoderm | 5.31e-09 | 18 |
heart tube | 5.31e-09 | 18 |
heart primordium | 5.31e-09 | 18 |
cardiac mesoderm | 5.31e-09 | 18 |
cardiogenic plate | 5.31e-09 | 18 |
heart rudiment | 5.31e-09 | 18 |
nervous system | 6.00e-09 | 75 |
central nervous system | 8.45e-09 | 73 |
regional part of nervous system | 1.50e-08 | 54 |
brain | 2.78e-08 | 47 |
future brain | 2.78e-08 | 47 |
neural tube | 4.64e-08 | 52 |
neural rod | 4.64e-08 | 52 |
future spinal cord | 4.64e-08 | 52 |
neural keel | 4.64e-08 | 52 |
regional part of brain | 8.28e-08 | 46 |
ectoderm-derived structure | 8.89e-08 | 95 |
ectoderm | 8.89e-08 | 95 |
presumptive ectoderm | 8.89e-08 | 95 |
anterior neural tube | 2.55e-07 | 40 |
regional part of forebrain | 6.47e-07 | 39 |
forebrain | 6.47e-07 | 39 |
future forebrain | 6.47e-07 | 39 |