FFCP PHASE1:Hg19::chr7:141438347..141438356,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11317 | |||
|TSSclassifier=strong | |||
|UniProt=Q04837 | |||
|association_with_transcript=-43bp_to_ENST00000484178_5end | |||
|cluster_id=chr7:141438347..141438356,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_4_at_SSBP1_5end | |||
|id=chr7:141438347..141438356,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.88e-19;2!CL:0001016;1.88e-19;2!CL:0000945;1.72e-09;24!CL:0000453;2.49e-08;5!CL:0000840;4.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.80e-19,2;CL:0001016,1.80e-19,2;CL:0000945,1.68e-09,24;CL:0000826,1.68e-09,24;CL:0000453,2.45e-08,5;CL:0000840,4.39e-07,5;CL:0001029,4.39e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.72e-11;1!DOID:4549;6.72e-11;1!DOID:5861;6.72e-11;1!DOID:6496;6.72e-11;1!DOID:630;9.37e-11;1!DOID:0050177;9.37e-11;1!DOID:0050427;9.37e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.73e-11,1;DOID:4549,6.73e-11,1;DOID:5861,6.73e-11,1;DOID:6496,6.73e-11,1;DOID:630,9.84e-11,1;DOID:0050177,9.84e-11,1;DOID:0050427,9.84e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.38e-10;1!UBERON:0001301;2.38e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.30e-10,1;UBERON:0001301,4.33e-10,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.247532705920093,0,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0,0,2.29240217243854,1.9704141467987,2.59745578335141,0,0,0,0,0,0,0.154934401160603,0,0,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0.28769239232215,0,0.709446689665756,0.344745680736619,0,0,0,0.272906150057846,0.449446968890169,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0.502497330513487,1.0429658368404,1.08594422352558,0,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0.661044872784862,0,0,1.17447437874188,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0.221533894583621,0,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,0.531831842075461,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0,0,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.368199594569197,0.646584227275248,0,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.439001141634502,1.1240175325762,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0.702012795417713,0.594524649154913,0,0.16798212819886,0,0.716468181622786,0,0,1.97065295158377,0.176096868026452,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.289562613335158,0,0.358121926479791,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.644566922551274,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0.929691098594572,0.31481234683064,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.28853842595289,0,0.318852545457645,0.199579371432817,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0,0.23874448473769,0,0.307160702099232,1.9882952955326,0,0,0.329607748453519,0,0,0.276283915531148,0.251932747854276,0,0,0.622079175323615,0.179736702294654,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0.435753854075961,0.139423744278603,0,0.113942055847001,0,0,0.108647371922008,0,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0,0,1.77912677208373,0.988511511572023,0.417687798021821,0.067401132980677,0,0,0,0.391329237864179,0.971121518136371,0,0,0.30607276163049,0.063186579628488,0.751617097072463,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.0870592065804026,1.04836000945218,0,0,0,0.0821154570532092,0.193978032976839,10.1494545695225,0,0.137041924646751,0.19871461170299,0.0633107959558787,0,0,0,0.19980960958213,0,0.458146384663663,0,0.288109595976299,0,0,0,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0.272406812223151,0.160753148465019,0,0,1.349843349309,3.0952078182318,0,0,0.0788057072991982,0,0,0,0,0,0,0,1.08599920350743,0,0.326587360109409,1.19730191562487,0,0,0.113312091520126,0.146552233678082,0,0,0.13223260174269,0.171086837884329,0,0.106787412567695,0,0,1.9846640872478,0.395223263795889,0,0,0,0,0,0,0.628216385000937,0,0.244052529803926,0.1251909307065,0,0.221858103073705,0.124192805882767,0.138348634936231,0.249960815924213,0.151649117541648,2.56918800190471,0,0,0,0.597019211547496,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0.228840068396924,0.302461847526478,0,0.147855149989634,0,0,0,0.829412415681711,0,0.521745061811734,0.300515217994437,0,0,0.545545977607678,0.107410557042488,0,1.19428766609585,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0,0,0,0.256241518587947,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0.79994958341972,0.213383459388282,0.172214979660816,0,0,0.279759015438889,1.86623178009892,0.127894371303652,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0.352675943690684,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0,0,0.462102664601353,0,0,0,0,0.20170506870352,0,0,0,0,0.202612753855184,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0.0887023701626388,0.691403925334676,0,0,0.0657727735628491,0,0.111231401892069,0,0.314231179832004,0,0,0,0,0,0.316027223465453,0,0,0,0.828864656652147,0.17071847709395,1.38251932362818,0,0.236664001461131,0.426067023795788,0,0,0,0,0.335566295393377,0,0.853425474875886,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0.109940516745429,0,0,0,0.470317296361523,0.245148321753905,0,0.196308467114945,0,0,0.169927114687817,0.187967835959707,0,0.599646935549574,0.357107877211315,0,0.401206833445841,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.227336094654718,0,0,0.20686599172379,0,0,0.0645889098360061,0.124149428591716,0.112131862580613,0.0636471582781649,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0.122241444182866,0,0,0.201273793591026,2.56454793842586 | |||
|short_description=p4@SSBP1 | |||
}} |
Latest revision as of 18:51, 16 September 2015
Short description: | p4@SSBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SSBP1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -43bp_to_ENST00000484178_5end |
EntrezGene: | SSBP1 |
HGNC: | 11317 |
UniProt: | Q04837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.80e-19 | 2 |
immature CD1a-positive Langerhans cell | 1.80e-19 | 2 |
lymphocyte of B lineage | 1.68e-09 | 24 |
pro-B cell | 1.68e-09 | 24 |
Langerhans cell | 2.45e-08 | 5 |
immature conventional dendritic cell | 4.39e-07 | 5 |
common dendritic progenitor | 4.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.30e-10 | 1 |
epididymis | 4.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.73e-11 | 1 |
extraosseous chondrosarcoma | 6.73e-11 | 1 |
myxoid chondrosarcoma | 6.73e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 6.73e-11 | 1 |
genetic disease | 9.84e-11 | 1 |
monogenic disease | 9.84e-11 | 1 |
xeroderma pigmentosum | 9.84e-11 | 1 |