FFCP PHASE1:Hg19::chr7:142494255..142494285,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_uc003wbg.3_5end | |||
|cluster_id=chr7:142494255..142494285,+ | |||
|coexpression_cluster_id=C861 | |||
|description=CAGE_peak_1_at_uc003wbg.3_5end | |||
|id=chr7:142494255..142494285,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.47e-26!53;CL:0000051!1.47e-26!53;CL:0000838!1.05e-25!52;CL:0000084!1.49e-16!25;CL:0000827!1.49e-16!25;CL:0000791!1.50e-15!18;CL:0000789!1.50e-15!18;CL:0002420!1.50e-15!18;CL:0002419!1.50e-15!18;CL:0000790!1.50e-15!18;CL:0000236!1.09e-11!14;CL:0000625!1.34e-10!11;CL:0000945!1.21e-08!24;CL:0000826!1.21e-08!24;CL:0002087!1.91e-08!119;CL:0000738!6.27e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.26e-24;53!CL:0000084;5.55e-24;25!CL:0000791;2.42e-23;18!CL:0000789;2.42e-23;18!CL:0002419;2.42e-23;18!CL:0000236;1.03e-16;13!CL:0000625;9.33e-16;11!CL:0000945;1.17e-14;24!CL:0000624;7.67e-08;6!CL:0002543;3.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.59e-42,53;CL:0000051,1.59e-42,53;CL:0000838,3.67e-41,52;CL:0000084,3.25e-24,25;CL:0000827,3.25e-24,25;CL:0000791,1.36e-23,18;CL:0000789,1.36e-23,18;CL:0002420,1.36e-23,18;CL:0002419,1.36e-23,18;CL:0000790,1.36e-23,18;CL:0000236,6.48e-18,14;CL:0002087,2.84e-17,115;CL:0000625,8.68e-16,11;CL:0000945,1.19e-14,24;CL:0000826,1.19e-14,24;CL:0000738,1.76e-14,136;CL:0002031,1.74e-12,120;CL:0000037,3.03e-11,168;CL:0000988,6.63e-10,177;CL:0002032,8.56e-10,161;CL:0000837,8.56e-10,161;CL:0000624,4.80e-08,6;CL:0002543,2.82e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.26e-24;53!CL:0000790;2.42e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.94e-07!115;UBERON:0001638!4.52e-07!9;UBERON:0003920!4.52e-07!9;UBERON:0004582!4.52e-07!9;UBERON:0000178!7.02e-07!15;UBERON:0000179!7.02e-07!15;UBERON:0000463!7.02e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.05e-11;15!UBERON:0000179;6.05e-11;15!UBERON:0000463;6.05e-11;15!UBERON:0001638;2.82e-10;9!UBERON:0003920;2.82e-10;9!UBERON:0004582;2.82e-10;9!UBERON:0002390;1.37e-09;32!UBERON:0002193;5.66e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.71e-11,15;UBERON:0000179,7.71e-11,15;UBERON:0000463,7.71e-11,15;UBERON:0001638,3.04e-10,9;UBERON:0003920,3.04e-10,9;UBERON:0004582,3.04e-10,9;UBERON:0004177,3.75e-07,7;UBERON:0005057,3.75e-07,7;UBERON:0002370,6.45e-07,4;UBERON:0005058,6.45e-07,4;UBERON:0009113,6.45e-07,4;UBERON:0003295,6.45e-07,4;UBERON:0005562,6.45e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.19454117451962,2.09340350391728,3.71350332621293,2.11013582582763,0,0,0,0,0,0,0.492484232307152,2.65200898617529,0,0,0.136874425072884,0,1.91033514369878,2.05251473624864,2.04648031415566,3.14691421479123,1.91914699048606,1.85779347979291,0,0,0,0,3.83856927716038,5.5784083473621,1.66198622559563,4.61252229181326,1.08505435357926,0,2.26725566213286,0,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,19.3595868907455,16.3841583378639,16.011166569544,16.2157484575273,15.2150475073685,18.3920780785435,15.8650769468367,18.1270213361719,5.12291672198504,7.6340834618222,6.49864487812889,9.25199300053181,3.36305137788922,2.37045676297569,2.9506465517075,1.57204305099666,2.67281948699362,8.3593247695339,6.51844533267181,5.6813736688168,5.84480185223734,7.24167969753628,11.1950244840438,8.86135578334484,5.1452734115353,2.94610035369053,3.38154303655683,5.09757504271396,6.35605040907451,6.37566788617116,4.89345658434799,5.35081656179426,3.1360657141493,7.13848858994667,3.83220493601921,6.52892146416997,7.33757106856558,3.18565414324097,8.46408490013344,4.75226022224187,6.625305239422,8.70308955850045,13.742379920758,13.0227488624209,28.7394798922366,6.8546292696409,46.2671538705468,2.46201486600758,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,1.84453049955565,0.458426764241994,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0.39752481473341,0,2.42998351125316,2.26123176769604,2.09749718104953,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0.735326160691737,0,1.87529429396568,2.02076435363553,1.91439516821648,4.5994991239765,6.6448596169769,2.01521918323448,0,0,0,0,2.91250176828533,0,0,1.77334191099179,0,0,0,0.311211035399766,0.134710672069688,0,0.908144565869588,1.72852777344,2.57753575017176,0,0.570471821544449,0,0,0,0,0,0.245668634623536,0,0,0,3.64064544775211,5.03032699271367,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0,2.6064664424826,1.03993478527958,1.44331342025273,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0.266422179016099,0,0.542621605391443,4.11620168390384,0,0,2.37585561880029,0,0,0,0,0,0,0,0,0,0,0,0,11.2085143993527,4.92576900504818,24.581543533985,5.00537841491019,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,1.50051156317903,0.813795071099207,0,0,0,0,0,0,0,1.32845119707087,0.737476674166813,0.347534457872331,0.195801157462741,0,4.13536052245775,2.15714200818617,3.09509917629989,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.348631135379878,0,0,0,3.21480454860899,0,0,0.451199612907412,0.15403067420883,0.784349769176855,0,0,0,0.170093705276516,0,0,0.812839312631559,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0.384380134730212,0,0.10115778085555,0,0.31481234683064,0.6970372701606,0,1.59691809095107,0,0,0.715624433709956,0,1.2655176988749,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.824686816419805,3.43710218674637,0,0,0.975267478179181,0,0,2.8664981395677,0.282810863907425,0,0,0,0.438450885253763,1.15755106853338,2.62357900818653,0.202910376962704,1.8589409885985,2.25356482025793,4.01551786171344,1.47373561519682,0,1.77380532035299,0,0,4.9331512589543,0,0,0,0,0,0.43050537267123,0,0.886860307073351,0.459446800413919,3.04468565539302,6.117097657139,2.27858874869665,4.2881719582402,6.17043409629291,1.94541993357815,6.48037724685738,2.37937552888281,0,0,0,10.0333714567888,0,0,3.18852545457645,0.798317485731266,3.83010740264733,0,0,0,0,0,0,1.35433422241283,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0.66614393599564,0,0,0.293016358543788,0,5.46072582959644,0,0,0,0,0,0,0,0.494411622680279,0,0,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,7.18449277040819,0,0.969332746095218,0.834912883456661,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,1.10579259931225,1.18219047581419,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0.641183153813036,0,25.5483245489341,0,0,0.451191321234361,0,0.335643173951685,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0.337005664903385,0,0.937057782901357,10.94728735294,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0.548167698587004,0,1.2029051231617,0,0,0.640358984218058,0.19980960958213,0,0,0,0.720273989940749,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.550157746388935,1.66176135211674,0,0,0.850493793212345,0,0.0788057072991982,0.0524545881349981,0,0,0.38383039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| |||
|short_description=p1@uc003wbg.3 | |||
}} |
Latest revision as of 06:57, 31 July 2015
Short description: | p1@uc003wbg.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc003wbg.3_5end |
Coexpression cluster: | C861_CD19_chronic_NK_Natural_lymphangiectasia_acute_CD8 |
Association with transcript: | 10bp_to_uc003wbg.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.59e-42 | 53 |
common lymphoid progenitor | 1.59e-42 | 53 |
lymphoid lineage restricted progenitor cell | 3.67e-41 | 52 |
T cell | 3.25e-24 | 25 |
pro-T cell | 3.25e-24 | 25 |
mature alpha-beta T cell | 1.36e-23 | 18 |
alpha-beta T cell | 1.36e-23 | 18 |
immature T cell | 1.36e-23 | 18 |
mature T cell | 1.36e-23 | 18 |
immature alpha-beta T cell | 1.36e-23 | 18 |
B cell | 6.48e-18 | 14 |
nongranular leukocyte | 2.84e-17 | 115 |
CD8-positive, alpha-beta T cell | 8.68e-16 | 11 |
lymphocyte of B lineage | 1.19e-14 | 24 |
pro-B cell | 1.19e-14 | 24 |
leukocyte | 1.76e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 1.74e-12 | 120 |
hematopoietic stem cell | 3.03e-11 | 168 |
hematopoietic cell | 6.63e-10 | 177 |
hematopoietic oligopotent progenitor cell | 8.56e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.56e-10 | 161 |
CD4-positive, alpha-beta T cell | 4.80e-08 | 6 |
vein endothelial cell | 2.82e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 7.71e-11 | 15 |
haemolymphatic fluid | 7.71e-11 | 15 |
organism substance | 7.71e-11 | 15 |
vein | 3.04e-10 | 9 |
venous blood vessel | 3.04e-10 | 9 |
venous system | 3.04e-10 | 9 |
hemopoietic organ | 3.75e-07 | 7 |
immune organ | 3.75e-07 | 7 |
thymus | 6.45e-07 | 4 |
hemolymphoid system gland | 6.45e-07 | 4 |
thymic region | 6.45e-07 | 4 |
pharyngeal gland | 6.45e-07 | 4 |
thymus primordium | 6.45e-07 | 4 |