FFCP PHASE1:Mm9::chr2:35316792..35316811,-: Difference between revisions
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{{FFCP|EntrezGene=14594|HGNC=|UniProt=P23336|association_with_transcript=-6bp_to_ENSMUST00000113002_5end|description=CAGE_peak_4_at_Ggta1_5end|id=chr2:35316792..35316811,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!5.29e-12!88;UBERON:0004872!1.21e-09!33;UBERON:0004535!5.36e-08!23;UBERON:0001009!5.36e-08!23;UBERON:0007100!6.92e-07!18;UBERON:0000948!6.92e-07!18;UBERON:0005498!6.92e-07!18;UBERON:0004140!6.92e-07!18;UBERON:0009881!6.92e-07!18;UBERON:0004141!6.92e-07!18;UBERON:0003084!6.92e-07!18;UBERON:0007005!6.92e-07!18;UBERON:0004139!6.92e-07!18;UBERON:0004291!6.92e-07!18;UBERON:0000926!9.82e-07!193;UBERON:0004120!9.82e-07!193;UBERON:0006603!9.82e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.34e-12,87;UBERON:0004872,6.71e-10,33;UBERON:0004535,6.31e-09,23;UBERON:0001009,6.31e-09,23;UBERON:0000926,2.40e-08,120;UBERON:0004120,2.40e-08,120;UBERON:0006603,2.40e-08,120;UBERON:0007100,9.95e-08,18;UBERON:0000948,9.95e-08,18;UBERON:0005498,9.95e-08,18;UBERON:0004140,9.95e-08,18;UBERON:0009881,9.95e-08,18;UBERON:0004141,9.95e-08,18;UBERON:0003084,9.95e-08,18;UBERON:0007005,9.95e-08,18;UBERON:0004139,9.95e-08,18;UBERON:0004291,9.95e-08,18|phase1_expression=0.960893082628764,0,0,0,0,0,0,3.74457637980571,0.703943610758334,0.936258105287974,0,0,0.856003649656029,0.262261207256992,1.33243904726265,1.41732687172878,1.39912375625629,1.89277299214943,2.4680598049033,1.69755860719212,0.255129870453209,2.78014663362479,0.783599367416806,0.159992422793407,0.68822784320151,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0.166234645358492,0,3.34825304589526,0,3.66466620781659,2.94115744015507,3.41522742479223,2.91306211818692,1.25896817975577,1.92616169317078,1.83546752161682,0.782391344348039,0.65407546914134,2.19686182734472,3.30530828426282,1.39986421625363,2.87505128729943,1.17447824240415,1.45072428402269,2.35265659399725,2.31533492432352,3.72493471920384,3.09403255366465,0,0,0,1.0165335962074,0.889294796111139,0.899899717281399,1.97773272513395,2.8419204597844,0.299600110518405,0.768436610643109,0.207379224616955,0,0,0,0.441737081903227,0,0,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.37863096666592,0.453429360640713,2.02905142091174,0,0,0,0,0,0.702222100658759,0,0,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,2.33044095282455,0.890652834388949,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0.376999773989026,1.73036477414062,0.578397427679647,0.884610551949874,0.647067399789637,0.883366073841574,0,0,0,0,0.255457055208591,2.87556298814209,1.19980546198682,2.03312363316904,0,0,0,0.173824320192276,0,0.20778804455956,0,1.12023300235348,0.995255764880744,1.26361379216837,1.47309299120532,0.130120442962704,0,0.540186389416048,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,1.03481348295606,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,1.11218899690239,1.0447564995665,1.85203922767149,0.199034266818493,0,1.80143534980301,0.852490498186778,1.44988040774851,2.11073453982987,1.2604344302271,1.89395788468168,1.18058539048442,1.3884040159864,1.86027155800326,2.68273401399619,1.05088808130453,0.822799249567402,1.64167464079095,1.78351381000883,0.730999937126662,2.19550115291051,1.61047702512446,0,0.308713837137853,0,0.528901133327089,0.426576501070468,1.16118335930219,0.38660238396628,0.605050573870028,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.795825888164603,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.561086559122548,0.69560190836683,0.295220295959204,0.470996183524124,0.616985819609003,0,2.00214126859313,0.393117990226406,0.899448449539415,1.42002084971952,2.41177159752417,1.52775511068852,1.72617682470486,0.648540907100142,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,1.29327233116623,0,0.488894929326078,0.509235257325564,0.234690248288502,1.00503754465089,0.238043640886014,1.17080188714679,0.945810864637146,0.221464689648775,0.956728611944923,0.983179888294428,1.20879487306127,0.867894351489069,0,1.63171705145613,0,0.827810238914197,0,0.117211686592203,1.3114795630134,1.51482556322624,1.57754109708128,1.17131623288992,3.44677436372478,0.716906393857656,2.22798674082394,0.283076530788832,3.23848561339915,1.75353514746787,1.58115111178609,0,0.851640511249612,0.35613120733451,1.14020871547503,2.63952196756057,0,0.485561272309963,0.906970670894253,2.07465587731488,1.18120757152309,1.84461088766356,1.29214146584111,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0,6.33613611772018,6.99045833850607,0.220528398054962,2.4732937941222,2.09903754704677,0.844380948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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14594 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P23336 | |||
|association_with_transcript=-6bp_to_ENSMUST00000113002_5end | |||
|cluster_id=chr2:35316792..35316811,- | |||
|description=CAGE_peak_4_at_Ggta1_5end | |||
|id=chr2:35316792..35316811,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.29e-12!88;UBERON:0004872!1.21e-09!33;UBERON:0004535!5.36e-08!23;UBERON:0001009!5.36e-08!23;UBERON:0007100!6.92e-07!18;UBERON:0000948!6.92e-07!18;UBERON:0005498!6.92e-07!18;UBERON:0004140!6.92e-07!18;UBERON:0009881!6.92e-07!18;UBERON:0004141!6.92e-07!18;UBERON:0003084!6.92e-07!18;UBERON:0007005!6.92e-07!18;UBERON:0004139!6.92e-07!18;UBERON:0004291!6.92e-07!18;UBERON:0000926!9.82e-07!193;UBERON:0004120!9.82e-07!193;UBERON:0006603!9.82e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.34e-12,87;UBERON:0004872,6.71e-10,33;UBERON:0004535,6.31e-09,23;UBERON:0001009,6.31e-09,23;UBERON:0000926,2.40e-08,120;UBERON:0004120,2.40e-08,120;UBERON:0006603,2.40e-08,120;UBERON:0007100,9.95e-08,18;UBERON:0000948,9.95e-08,18;UBERON:0005498,9.95e-08,18;UBERON:0004140,9.95e-08,18;UBERON:0009881,9.95e-08,18;UBERON:0004141,9.95e-08,18;UBERON:0003084,9.95e-08,18;UBERON:0007005,9.95e-08,18;UBERON:0004139,9.95e-08,18;UBERON:0004291,9.95e-08,18 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,3.74457637980571,0.703943610758334,0.936258105287974,0,0,0.856003649656029,0.262261207256992,1.33243904726265,1.41732687172878,1.39912375625629,1.89277299214943,2.4680598049033,1.69755860719212,0.255129870453209,2.78014663362479,0.783599367416806,0.159992422793407,0.68822784320151,0,0,0,0.190023419456374,0.504060259519861,0,0,0,0,0,0.166234645358492,0,3.34825304589526,0,3.66466620781659,2.94115744015507,3.41522742479223,2.91306211818692,1.25896817975577,1.92616169317078,1.83546752161682,0.782391344348039,0.65407546914134,2.19686182734472,3.30530828426282,1.39986421625363,2.87505128729943,1.17447824240415,1.45072428402269,2.35265659399725,2.31533492432352,3.72493471920384,3.09403255366465,0,0,0,1.0165335962074,0.889294796111139,0.899899717281399,1.97773272513395,2.8419204597844,0.299600110518405,0.768436610643109,0.207379224616955,0,0,0,0.441737081903227,0,0,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.37863096666592,0.453429360640713,2.02905142091174,0,0,0,0,0,0.702222100658759,0,0,0.35333957451034,0.422530259330042,0,0,0,0.216491041011214,0.506719730950197,0,0.11418387971906,2.33044095282455,0.890652834388949,0.173485326766136,0.304465478312141,0.230615497256059,0.452167921657868,0.352766121407114,0.376999773989026,1.73036477414062,0.578397427679647,0.884610551949874,0.647067399789637,0.883366073841574,0,0,0,0,0.255457055208591,2.87556298814209,1.19980546198682,2.03312363316904,0,0,0,0.173824320192276,0,0.20778804455956,0,1.12023300235348,0.995255764880744,1.26361379216837,1.47309299120532,0.130120442962704,0,0.540186389416048,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,1.03481348295606,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,1.11218899690239,1.0447564995665,1.85203922767149,0.199034266818493,0,1.80143534980301,0.852490498186778,1.44988040774851,2.11073453982987,1.2604344302271,1.89395788468168,1.18058539048442,1.3884040159864,1.86027155800326,2.68273401399619,1.05088808130453,0.822799249567402,1.64167464079095,1.78351381000883,0.730999937126662,2.19550115291051,1.61047702512446,0,0.308713837137853,0,0.528901133327089,0.426576501070468,1.16118335930219,0.38660238396628,0.605050573870028,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0.795825888164603,0,0.898819408654221,0.432276099749388,0.199141273254367,0,0.228497025219458,0,0.407302655690628,0.581857461502877,0.561086559122548,0.69560190836683,0.295220295959204,0.470996183524124,0.616985819609003,0,2.00214126859313,0.393117990226406,0.899448449539415,1.42002084971952,2.41177159752417,1.52775511068852,1.72617682470486,0.648540907100142,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0,0,1.29327233116623,0,0.488894929326078,0.509235257325564,0.234690248288502,1.00503754465089,0.238043640886014,1.17080188714679,0.945810864637146,0.221464689648775,0.956728611944923,0.983179888294428,1.20879487306127,0.867894351489069,0,1.63171705145613,0,0.827810238914197,0,0.117211686592203,1.3114795630134,1.51482556322624,1.57754109708128,1.17131623288992,3.44677436372478,0.716906393857656,2.22798674082394,0.283076530788832,3.23848561339915,1.75353514746787,1.58115111178609,0,0.851640511249612,0.35613120733451,1.14020871547503,2.63952196756057,0,0.485561272309963,0.906970670894253,2.07465587731488,1.18120757152309,1.84461088766356,1.29214146584111,1.09060118843252,0.712994756769443,0.316036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0,6.33613611772018,6.99045833850607,0.220528398054962,2.4732937941222,2.09903754704677,0.844380948994182,1.07435109602823,1.14898629821543,0.582961673259701,0.18542530201051,1.02522528478712,1.23832120777933,1.48155621895769,1.31857919903284,0.956859594047176,0.228778173206523,1.69978429993855,1.81936888020755,2.21119958087078,0.954670618015114,0.158167996790568,0.406638934253697,0.432021363287205,0.627264888043406,1.31017538247707,0.674321731924103,0.743881101528023,0.26175594198403,0.648074866458964,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.387479470433193,1.18269287843545,0.234714477291508,0.13020438484395,0.104859344425711,0,0.864090018773596,2.21207784439725,0.810900861160657,1.1298205288131,1.81889152168913,3.40150721768215,1.58945083825012,1.32214994471966,1.03382669022204,2.62512769865184,2.057583779685,1.41156659191577,2.24153125701431,2.02044867444692,4.55819918508119,0.680191150845634,5.99362074109975,3.22969883794113,5.03653849092235,1.54551675225752,1.87682475451182,1.28206136987086,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0.729320151204882,0.628839487883947,0.183843508450014,0.666740183404846,1.03017528619447,1.60459604795908,0.758091635291392,0.50695859978048,0.565879024158229,0.842773567228942,1.02440243847791,0.918967503289812,1.42888107384922,0.463537303779422,0.77163688185482,0,1.03039244094078,0.685738504770831,1.59728225543404,0.238436189947321,1.45346416632329,0.846984423737976,0.676916863133412,1.09756783723664,1.31534855718921,0.814824683075171,1.12228454331548,1.18635018124174,0.886540341380071,0.818462086339379,0.77468420592983,0.578719832943424,0.749431733813838,0.233931608445408,1.07435527024149,1.14772999241306,1.98532277207564,0.927471342481686 | |||
|short_description=p4@Ggta1 | |||
}} |
Latest revision as of 15:53, 26 September 2015
Short description: | p4@Ggta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ggta1_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENSMUST00000113002_5end |
EntrezGene: | Ggta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data