FFCP PHASE1:Hg19::chr7:37960359..37960370,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54749 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17572 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=99bp_to_ENST00000423717_5end | |||
|cluster_id=chr7:37960359..37960370,+ | |||
|description=CAGE_peak_9_at_EPDR1_5end | |||
|id=chr7:37960359..37960370,+ | |||
|ontology_enrichment_celltype=CL:0000136!2.21e-11!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.62e-24;13!CL:0002334;5.71e-09;12!CL:0002579;1.32e-08;3!CL:0002615;1.59e-07;3!CL:0002580;3.82e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.48e-24,15;CL:0002334,4.98e-09,12;CL:0002579,1.37e-08,3;CL:0002615,2.43e-07,3;CL:0002580,3.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.49e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.56e-24!115;UBERON:0001049!7.28e-15!57;UBERON:0005068!7.28e-15!57;UBERON:0006241!7.28e-15!57;UBERON:0007135!7.28e-15!57;UBERON:0002616!1.17e-13!59;UBERON:0000955!5.53e-12!69;UBERON:0006238!5.53e-12!69;UBERON:0001017!5.64e-12!82;UBERON:0005743!3.79e-11!86;UBERON:0000073!2.80e-09!94;UBERON:0001016!2.80e-09!94;UBERON:0002020!6.73e-09!34;UBERON:0003528!6.73e-09!34;UBERON:0001893!8.28e-09!34;UBERON:0003075!9.22e-09!86;UBERON:0007284!9.22e-09!86;UBERON:0003080!1.05e-08!42;UBERON:0001869!1.46e-08!32;UBERON:0002780!2.60e-08!41;UBERON:0001890!2.60e-08!41;UBERON:0006240!2.60e-08!41;UBERON:0003076!3.09e-08!15;UBERON:0003057!3.09e-08!15;UBERON:0002791!3.25e-08!33;UBERON:0002619!5.16e-08!22;UBERON:0002346!5.68e-08!90;UBERON:0000956!1.05e-07!25;UBERON:0000203!1.05e-07!25;UBERON:0000025!1.32e-07!194;UBERON:0000477!1.69e-07!286;UBERON:0000475!3.64e-07!365;UBERON:0004111!4.37e-07!241;UBERON:0001950!5.16e-07!20;UBERON:0004733!7.26e-07!12;UBERON:0002028!7.26e-07!12;UBERON:0007277!7.26e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.20e-16;9!UBERON:0000042;3.20e-16;9!UBERON:0003688;1.96e-14;6!UBERON:0002358;1.96e-14;6!UBERON:0003684;1.96e-14;6!UBERON:0001178;1.96e-14;6!UBERON:0004733;4.71e-09;12!UBERON:0002028;4.71e-09;12!UBERON:0004732;2.90e-08;13!UBERON:0001443;4.86e-07;11!UBERON:0002680;7.20e-07;9!UBERON:0001895;7.20e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.15e-14,6;UBERON:0002358,3.15e-14,6;UBERON:0003684,3.15e-14,6;UBERON:0001178,3.15e-14,6;UBERON:0004457,8.09e-12,12;UBERON:0000042,8.09e-12,12;UBERON:0007023,2.84e-10,114;UBERON:0004733,5.24e-09,12;UBERON:0002028,5.24e-09,12;UBERON:0007277,5.24e-09,12;UBERON:0003076,6.38e-09,15;UBERON:0003057,6.38e-09,15;UBERON:0001049,1.14e-08,56;UBERON:0005068,1.14e-08,56;UBERON:0006241,1.14e-08,56;UBERON:0007135,1.14e-08,56;UBERON:0000073,2.82e-08,53;UBERON:0002616,2.82e-08,53;UBERON:0004732,3.19e-08,13;UBERON:0001443,3.86e-07,11;UBERON:0002680,9.94e-07,9;UBERON:0001895,9.94e-07,9;UBERON:0010092,9.94e-07,9 | |||
|phase1_expression=1.63510541343501,2.5692062866918,2.96004248601539,1.0007329835313,1.34088328328186,6.10636966870258,2.53299878168311,0.631719873426831,1.04474251279935,0.245733936501509,0.697801167972428,0,0,0,0,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,0,0.940364164434263,0.286235987131057,0.273748850145768,0,0.229240217243854,0.246301768349837,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0,0.50133791063589,1.15877215168659,0,0,0.0945348171640679,0,0,0.654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2663051166458,0.662045904066094,0.573673241497627,1.06400514659507,0.560677600142307,0,1.2333377420858,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0,1.18800285728205,1.23633464639278,0,0,0,0,0,0,0.30648779579902,1.65261864797256,0.226864366320042,0.179389635688862,0.427114777637135,0,0.600182192168805,0.206105058476878,0,0.18611685633159,0,0,0.252433774244115,0,0.323292113637624,0.355009592516614,0.503760491138201,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0,0.482022059766964,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.444485260045183,0,0,1.71072446022705,0.411309970813294,0,0,0,0.43596006883328,0,0,0,0,1.06375246633948,2.08014873822732,0.257207374262142,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,1.50719688529793,0.871533458600294,1.19967589418468,0,0,0,0,0,0,0.579125226670317,0,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,1.48864684691266,1.2276957863045,1.40330047216537,3.07533958213682,3.58195074346692,2.41280881715411,2.96836132889982,0,0.355123450626254,0.164254312027618,0,0,0,0.601519410909855,0.276242966807689,0,0.182091168006717,1.70461739447251,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,1.0457418040996,0,0,0,0.206082023295445,0.457847324091717,0.41254749960294,0,0,0,0,0,0.15350367472613,0.137836572484531,0,0,0.0852266274161009,0.356128142586949,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,1.06461206063404,0,0.18532421910392,0,0.744316738719335,0,0.762520775695299,0,0,0,0,0.179872457583315,0,0.235624804691373,1.01091240786658,6.34041284692033,0,0,1.21856744815642,0,0,0,1.13008116620243,0,1.99031692572366,0.876901770507525,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0,0,0,2.53329162357197,1.97576935775941,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0.199579371432817,0.5745161103971,0,0.649243880549111,0,0.228234679033192,0.156679895773023,2.50634477090067,0.338583555603207,0,0,0,0,0.307240764308458,0.447352215784832,0.166849141711909,0.781552381608161,0,0,0.540911356951966,0.33307196799782,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0.824019371133798,0,0.398495976502139,0.276283915531148,0,0.409074730008619,0.369254416383208,0.311039587661807,0,0,0,0.690503839458535,0,0,0.969332746095218,1.39152147242777,0,0,0,0.724999575434793,0,0.508507300585533,0,0,0,0,0.885741385813839,0.361789315876224,7.62908681585416,2.87506075821184,2.06883333267483,1.75508317723178,0,0.278847488557207,1.61595542857974,0.91153644677601,0,0,0,0,0.0915975934018623,0,2.04386596391473,0.470940769185074,0.332423363800313,0,0,0,0,0.635746315921515,0.210998064528027,0.163232808159148,0,0,0.995261931078505,0.265372693510018,0.611030144933625,0,0,0.104421949505455,0.337005664903385,5.61804353109152,0.937057782901357,0,0,0,0,0,0,0.821425535170343,0,0.103688191397247,0,0.330991955875499,0,0,0,0,0.347119476670262,0,0,1.04836000945218,0.687944129886466,0.290268993867255,0.365446585430928,0.164230914106418,0.484945082442097,0,0.451961481561065,0.274083849293502,0,0.50648636764703,0,0.240476460754601,0.426905989478705,0,0.576361668616424,0,0,0,0.124252535565433,0.235694034616795,0,0,0.611989305817931,0,0,0,2.55493176133945,2.14882720709979,0,0,1.14580212005842,0,0.998395002494955,1.71690419254628,0.446342914883745,0.268733889946905,0.360299883542404,0,0.236349546921671,0.412079291905832,0.337017719270924,0.0984274815147488,0.254019996197353,2.38568906942791,0.544813624446302,0,0.275078873194468,0,0,0,0.971992906528395,0,0.394028536495991,0.314727528809989,0,0,0,0.714695326373367,2.64836788146173,0,1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| |||
|short_description=p9@EPDR1 | |||
}} |
Latest revision as of 11:54, 18 September 2015
Short description: | p9@EPDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EPDR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 99bp_to_ENST00000423717_5end |
EntrezGene: | EPDR1 |
HGNC: | 17572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.48e-24 | 15 |
preadipocyte | 4.98e-09 | 12 |
omentum preadipocyte | 1.37e-08 | 3 |
adipocyte of omentum tissue | 2.43e-07 | 3 |
preadipocyte of the breast | 3.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.15e-14 | 6 |
peritoneum | 3.15e-14 | 6 |
abdominal cavity | 3.15e-14 | 6 |
visceral peritoneum | 3.15e-14 | 6 |
cavity lining | 8.09e-12 | 12 |
serous membrane | 8.09e-12 | 12 |
adult organism | 2.84e-10 | 114 |
segmental subdivision of hindbrain | 5.24e-09 | 12 |
hindbrain | 5.24e-09 | 12 |
presumptive hindbrain | 5.24e-09 | 12 |
posterior neural tube | 6.38e-09 | 15 |
chordal neural plate | 6.38e-09 | 15 |
neural tube | 1.14e-08 | 56 |
neural rod | 1.14e-08 | 56 |
future spinal cord | 1.14e-08 | 56 |
neural keel | 1.14e-08 | 56 |
regional part of nervous system | 2.82e-08 | 53 |
regional part of brain | 2.82e-08 | 53 |
segmental subdivision of nervous system | 3.19e-08 | 13 |
chest | 3.86e-07 | 11 |
regional part of metencephalon | 9.94e-07 | 9 |
metencephalon | 9.94e-07 | 9 |
future metencephalon | 9.94e-07 | 9 |