FFCP PHASE1:Mm9::chr3:130815472..130815497,+: Difference between revisions
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{{FFCP|EntrezGene=16842|HGNC=|MCL_coexpression_id=687|UniProt=Q8C402,Q3TEN5|association_with_transcript=-217bp_to_ENSMUST00000098611,ENSMUST00000136147,uc008rji.1,uc008rjj.1,uc008rjk.1_5end|description=CAGE_peak_6_at_Lef1_5end|id=chr3:130815472..130815497,+|ontology_enrichment_celltype=CL:0000791!2.09e-09!9;CL:0000789!2.09e-09!9;CL:0002420!2.09e-09!9;CL:0002419!2.09e-09!9;CL:0000790!2.09e-09!9;CL:0000624!2.47e-08!8;CL:0000838!1.08e-07!12;CL:0000084!3.65e-07!11;CL:0000827!3.65e-07!11;CL:0000542!7.36e-07!13;CL:0000051!7.36e-07!13|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-10,9;CL:0000789,1.24e-10,9;CL:0002420,1.24e-10,9;CL:0002419,1.24e-10,9;CL:0000790,1.24e-10,9;CL:0000084,1.42e-08,11;CL:0000827,1.42e-08,11;CL:0000624,2.50e-08,8;CL:0000838,8.44e-08,12;CL:0000542,3.81e-07,13;CL:0000051,3.81e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!6.05e-16!23;UBERON:0000974!6.05e-16!23;UBERON:0004807!6.05e-16!23;UBERON:0005058!6.05e-16!23;UBERON:0003351!6.05e-16!23;UBERON:0009113!6.05e-16!23;UBERON:0003295!6.05e-16!23;UBERON:0009722!6.05e-16!23;UBERON:0005562!6.05e-16!23;UBERON:0007690!6.05e-16!23;UBERON:0004177!3.03e-15!29;UBERON:0006562!6.01e-15!24;UBERON:0003408!6.01e-15!24;UBERON:0001557!6.01e-15!24;UBERON:0001042!6.01e-15!24;UBERON:0008814!6.01e-15!24;UBERON:0009145!6.01e-15!24;UBERON:0000065!1.23e-13!41;UBERON:0001004!4.55e-13!42;UBERON:0000072!2.01e-12!27;UBERON:0002193!3.60e-11!48;UBERON:0000991!9.61e-11!18;UBERON:0005564!9.61e-11!18;UBERON:0002390!1.51e-10!45;UBERON:0003061!1.51e-10!45;UBERON:0004176!4.56e-10!17;UBERON:0009196!4.56e-10!17;UBERON:0009117!4.56e-10!17;UBERON:0003135!6.57e-10!15;UBERON:0000473!2.96e-09!14;UBERON:0003101!5.21e-09!16;UBERON:0000079!5.21e-09!16;UBERON:0000063!6.19e-08!35;UBERON:0003133!7.21e-08!24;UBERON:0005156!7.27e-07!26;UBERON:0000990!7.27e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.29e-27,23;UBERON:0000974,2.29e-27,23;UBERON:0004807,2.29e-27,23;UBERON:0005058,2.29e-27,23;UBERON:0003351,2.29e-27,23;UBERON:0009113,2.29e-27,23;UBERON:0003295,2.29e-27,23;UBERON:0009722,2.29e-27,23;UBERON:0005562,2.29e-27,23;UBERON:0007690,2.29e-27,23;UBERON:0004177,1.61e-26,29;UBERON:0005057,1.61e-26,29;UBERON:0006562,4.49e-26,24;UBERON:0003408,4.49e-26,24;UBERON:0001557,4.49e-26,24;UBERON:0001042,4.49e-26,24;UBERON:0008814,4.49e-26,24;UBERON:0009145,4.49e-26,24;UBERON:0000072,9.02e-23,27;UBERON:0000077,2.85e-21,35;UBERON:0002193,3.13e-20,48;UBERON:0002405,3.13e-20,48;UBERON:0002390,1.49e-19,45;UBERON:0003061,1.49e-19,45;UBERON:0007811,3.61e-16,36;UBERON:0000065,9.32e-14,41;UBERON:0001004,2.41e-13,42;UBERON:0000153,5.98e-13,43;UBERON:0000926,6.29e-12,120;UBERON:0004120,6.29e-12,120;UBERON:0006603,6.29e-12,120;UBERON:0000473,3.61e-11,14;UBERON:0003135,2.45e-10,15;UBERON:0003101,1.31e-09,16;UBERON:0000079,1.31e-09,16;UBERON:0003929,2.37e-09,55;UBERON:0004176,5.74e-09,17;UBERON:0009196,5.74e-09,17;UBERON:0009117,5.74e-09,17;UBERON:0000991,2.13e-08,18;UBERON:0005564,2.13e-08,18;UBERON:0002368,2.78e-08,60;UBERON:0001048,3.09e-08,134;UBERON:0003081,5.56e-08,87;UBERON:0002530,2.21e-07,65;UBERON:0000490,3.22e-07,66;UBERON:0001041,4.57e-07,80;UBERON:0005911,9.31e-07,69|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0.84473233291,0.936258105287974,1.19852577757853,0.797721589953364,8.04643430676667,5.07038334030185,0,0.202475267389826,0.699561878128147,1.41957974411207,1.23402990245165,0,3.40173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,6.5282592781021,12.4354705682712,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.153606533256243,0.527545150920775,0.182975287204819,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.91347103775248,6.47344709117929,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0.915001205637253,0,0,0,0.41557608911912,0,0.101839363850316,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0,0,0.502518772325447,0,0,0,0.44292937929755,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0.361877549568935,0.238744688006273,0.328281799490123,0,0,1.02522528478712,0,0,0,1.50363650493128,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,33.8215763210514,0.149516546043979,1.32366792365678,2.72231663681667,1.80823752868824,1.68956125490778,0.352071715937262,0.13020438484395,1.25831213310853,10.6297013163443,11.8092302565725,7.2682557744481,0.405450430580328,1.33524244314275,4.28738715826724,5.72885426135941,4.56967115996909,5.04820887983869,6.4983391956814,5.04832249740738,5.10585604588499,6.957006774442,8.47883562435846,6.25376970662141,7.24636793525727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p6@Lef1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16842 | |||
|HGNC= | |||
|MCL_coexpression_id=687 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C402,Q3TEN5 | |||
|association_with_transcript=-217bp_to_ENSMUST00000098611,ENSMUST00000136147,uc008rji.1,uc008rjj.1,uc008rjk.1_5end | |||
|cluster_id=chr3:130815472..130815497,+ | |||
|description=CAGE_peak_6_at_Lef1_5end | |||
|id=chr3:130815472..130815497,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.09e-09!9;CL:0000789!2.09e-09!9;CL:0002420!2.09e-09!9;CL:0002419!2.09e-09!9;CL:0000790!2.09e-09!9;CL:0000624!2.47e-08!8;CL:0000838!1.08e-07!12;CL:0000084!3.65e-07!11;CL:0000827!3.65e-07!11;CL:0000542!7.36e-07!13;CL:0000051!7.36e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-10,9;CL:0000789,1.24e-10,9;CL:0002420,1.24e-10,9;CL:0002419,1.24e-10,9;CL:0000790,1.24e-10,9;CL:0000084,1.42e-08,11;CL:0000827,1.42e-08,11;CL:0000624,2.50e-08,8;CL:0000838,8.44e-08,12;CL:0000542,3.81e-07,13;CL:0000051,3.81e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.05e-16!23;UBERON:0000974!6.05e-16!23;UBERON:0004807!6.05e-16!23;UBERON:0005058!6.05e-16!23;UBERON:0003351!6.05e-16!23;UBERON:0009113!6.05e-16!23;UBERON:0003295!6.05e-16!23;UBERON:0009722!6.05e-16!23;UBERON:0005562!6.05e-16!23;UBERON:0007690!6.05e-16!23;UBERON:0004177!3.03e-15!29;UBERON:0006562!6.01e-15!24;UBERON:0003408!6.01e-15!24;UBERON:0001557!6.01e-15!24;UBERON:0001042!6.01e-15!24;UBERON:0008814!6.01e-15!24;UBERON:0009145!6.01e-15!24;UBERON:0000065!1.23e-13!41;UBERON:0001004!4.55e-13!42;UBERON:0000072!2.01e-12!27;UBERON:0002193!3.60e-11!48;UBERON:0000991!9.61e-11!18;UBERON:0005564!9.61e-11!18;UBERON:0002390!1.51e-10!45;UBERON:0003061!1.51e-10!45;UBERON:0004176!4.56e-10!17;UBERON:0009196!4.56e-10!17;UBERON:0009117!4.56e-10!17;UBERON:0003135!6.57e-10!15;UBERON:0000473!2.96e-09!14;UBERON:0003101!5.21e-09!16;UBERON:0000079!5.21e-09!16;UBERON:0000063!6.19e-08!35;UBERON:0003133!7.21e-08!24;UBERON:0005156!7.27e-07!26;UBERON:0000990!7.27e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.29e-27,23;UBERON:0000974,2.29e-27,23;UBERON:0004807,2.29e-27,23;UBERON:0005058,2.29e-27,23;UBERON:0003351,2.29e-27,23;UBERON:0009113,2.29e-27,23;UBERON:0003295,2.29e-27,23;UBERON:0009722,2.29e-27,23;UBERON:0005562,2.29e-27,23;UBERON:0007690,2.29e-27,23;UBERON:0004177,1.61e-26,29;UBERON:0005057,1.61e-26,29;UBERON:0006562,4.49e-26,24;UBERON:0003408,4.49e-26,24;UBERON:0001557,4.49e-26,24;UBERON:0001042,4.49e-26,24;UBERON:0008814,4.49e-26,24;UBERON:0009145,4.49e-26,24;UBERON:0000072,9.02e-23,27;UBERON:0000077,2.85e-21,35;UBERON:0002193,3.13e-20,48;UBERON:0002405,3.13e-20,48;UBERON:0002390,1.49e-19,45;UBERON:0003061,1.49e-19,45;UBERON:0007811,3.61e-16,36;UBERON:0000065,9.32e-14,41;UBERON:0001004,2.41e-13,42;UBERON:0000153,5.98e-13,43;UBERON:0000926,6.29e-12,120;UBERON:0004120,6.29e-12,120;UBERON:0006603,6.29e-12,120;UBERON:0000473,3.61e-11,14;UBERON:0003135,2.45e-10,15;UBERON:0003101,1.31e-09,16;UBERON:0000079,1.31e-09,16;UBERON:0003929,2.37e-09,55;UBERON:0004176,5.74e-09,17;UBERON:0009196,5.74e-09,17;UBERON:0009117,5.74e-09,17;UBERON:0000991,2.13e-08,18;UBERON:0005564,2.13e-08,18;UBERON:0002368,2.78e-08,60;UBERON:0001048,3.09e-08,134;UBERON:0003081,5.56e-08,87;UBERON:0002530,2.21e-07,65;UBERON:0000490,3.22e-07,66;UBERON:0001041,4.57e-07,80;UBERON:0005911,9.31e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0.84473233291,0.936258105287974,1.19852577757853,0.797721589953364,8.04643430676667,5.07038334030185,0,0.202475267389826,0.699561878128147,1.41957974411207,1.23402990245165,0,3.40173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,6.5282592781021,12.4354705682712,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0.153606533256243,0.527545150920775,0.182975287204819,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.91347103775248,6.47344709117929,0.148442139064825,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,0,0.915001205637253,0,0,0,0.41557608911912,0,0.101839363850316,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0.189491411770485,0.162964976442026,0,0,0.502518772325447,0,0,0,0.44292937929755,0.159454768657487,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0.304464949114599,0,0,0,0,0,0.361877549568935,0.238744688006273,0.328281799490123,0,0,1.02522528478712,0,0,0,1.50363650493128,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,33.8215763210514,0.149516546043979,1.32366792365678,2.72231663681667,1.80823752868824,1.68956125490778,0.352071715937262,0.13020438484395,1.25831213310853,10.6297013163443,11.8092302565725,7.2682557744481,0.405450430580328,1.33524244314275,4.28738715826724,5.72885426135941,4.56967115996909,5.04820887983869,6.4983391956814,5.04832249740738,5.10585604588499,6.957006774442,8.47883562435846,6.25376970662141,7.24636793525727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.419226325255965,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0.263069711437843,0,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0,0,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p6@Lef1 | |||
}} |
Latest revision as of 14:56, 1 October 2015
Short description: | p6@Lef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lef1_5end |
Coexpression cluster: | MCL_coexpression_mm9:687 |
Association with transcript: | -217bp_to_ENSMUST00000098611, ENSMUST00000136147, uc008rji.1, uc008rjj.1, uc008rjk.1_5end |
EntrezGene: | Lef1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.24e-10 | 9 |
alpha-beta T cell | 1.24e-10 | 9 |
immature T cell | 1.24e-10 | 9 |
mature T cell | 1.24e-10 | 9 |
immature alpha-beta T cell | 1.24e-10 | 9 |
T cell | 1.42e-08 | 11 |
pro-T cell | 1.42e-08 | 11 |
CD4-positive, alpha-beta T cell | 2.50e-08 | 8 |
lymphoid lineage restricted progenitor cell | 8.44e-08 | 12 |
lymphocyte | 3.81e-07 | 13 |
common lymphoid progenitor | 3.81e-07 | 13 |