FFCP PHASE1:Mm9::chr10:40197486..40197533,+: Difference between revisions
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|id=chr10:40197486..40197533,+
|short_description=p@chr10:40197486..40197533,+
|description=CAGE_peak_at_chr10:40197486..40197533,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:40197486..40197533,+ | |||
|description=CAGE_peak_at_chr10:40197486..40197533,+ | |||
|id=chr10:40197486..40197533,+ | |||
|ontology_enrichment_celltype=CL:0000553!5.35e-08!6;CL:0000556!5.35e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.36e-20,6;CL:0000556,2.36e-20,6;CL:0000050,1.57e-13,9;CL:0000839,2.59e-09,13;CL:0002031,8.51e-09,25;CL:0000763,1.59e-07,16;CL:0002027,4.17e-07,3;CL:0002006,4.17e-07,3;CL:0002024,4.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.81e-15,3;DOID:4045,9.81e-15,3;DOID:0050686,1.28e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.82e-11,32;UBERON:0002371,1.59e-07,16;UBERON:0001474,1.86e-07,22;UBERON:0004765,1.86e-07,22;UBERON:0001434,1.86e-07,22;UBERON:0002106,3.57e-07,6;UBERON:0004457,3.57e-07,6;UBERON:0000042,3.57e-07,6;UBERON:0004854,3.57e-07,6;UBERON:0009034,3.57e-07,6;UBERON:0002095,3.57e-07,6;UBERON:0004782,3.57e-07,6;UBERON:0003281,3.57e-07,6;UBERON:0009664,3.57e-07,6;UBERON:0002296,3.57e-07,6;UBERON:0005602,3.57e-07,6;UBERON:0001179,3.57e-07,6;UBERON:0006293,3.57e-07,6;UBERON:0002193,9.10e-07,48;UBERON:0002405,9.10e-07,48 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0.513602189793617,0.34968160967599,4.33042690360362,3.64455481301687,0.699561878128147,18.9277299214943,21.9383093769182,14.004858509335,0.0850432901510698,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,6.27797446105362,3.1253413780952,7.85285615960697,5.88231488031014,8.19654581950135,8.25367600152961,0,0,0,0,0,0,0,0,0,13.4226084846189,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0,9.32176381129818,0,0,0,0,0,0.117588707135705,0.251333182659351,0,0.289198713839823,1.76922110389975,0,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0,0.359445373517761,0,0.381210681219194,0,0.457500602818626,0,0,0,0,0,0,0.622034853050465,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0.945810864637146,0.664394068946325,0.956728611944923,0.655453258862952,0.690739927463582,0.289298117163023,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0.291480836629851,0,1.53783792718067,0.206386867963223,0,0.941842285023455,2.59719032669948,1.37266903923914,0.339956859987711,0.559805809294632,0.690999869022119,0.954670618015114,0,0.203319467126849,0,0,0,0,0,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0,0.25984164595559,0,0,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0,0,0,0,0.513602189793617,0.34968160967599,4.33042690360362,3.64455481301687,0.699561878128147,18.9277299214943,21.9383093769182,14.004858509335,0.0850432901510698,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,6.27797446105362,3.1253413780952,7.85285615960697,5.88231488031014,8.19654581950135,8.25367600152961,0,0,0,0,0,0,0,0,0,13.4226084846189,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0,9.32176381129818,0,0,0,0,0,0.117588707135705,0.251333182659351,0,0.289198713839823,1.76922110389975,0,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0,0.359445373517761,0,0.381210681219194,0,0.457500602818626,0,0,0,0,0,0,0.622034853050465,0,0,0.130120442962704,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0,0,0.945810864637146,0.664394068946325,0.956728611944923,0.655453258862952,0.690739927463582,0.289298117163023,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.354680467284547,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0.164140899745061,0.291480836629851,0,1.53783792718067,0.206386867963223,0,0.941842285023455,2.59719032669948,1.37266903923914,0.339956859987711,0.559805809294632,0.690999869022119,0.954670618015114,0,0.203319467126849,0,0,0,0,0,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0.483168241652012,0,0,0.202725215290164,0,0.25984164595559,0,0,0.120195449519969,0,0,0.15241361331,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0.564751842617067,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr10:40197486..40197533,+ | |||
}} | }} |
Latest revision as of 08:54, 4 August 2015
Short description: | p@chr10:40197486..40197533, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:40197486..40197533, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.36e-20 | 6 |
megakaryocyte | 2.36e-20 | 6 |
megakaryocyte-erythroid progenitor cell | 1.57e-13 | 9 |
myeloid lineage restricted progenitor cell | 2.59e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 8.51e-09 | 25 |
myeloid cell | 1.59e-07 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 4.17e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.17e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.82e-11 | 32 |
bone marrow | 1.59e-07 | 16 |
bone element | 1.86e-07 | 22 |
skeletal element | 1.86e-07 | 22 |
skeletal system | 1.86e-07 | 22 |
spleen | 3.57e-07 | 6 |
cavity lining | 3.57e-07 | 6 |
serous membrane | 3.57e-07 | 6 |
gastrointestinal system mesentery | 3.57e-07 | 6 |
stomach region | 3.57e-07 | 6 |
mesentery | 3.57e-07 | 6 |
gastrointestinal system serosa | 3.57e-07 | 6 |
mesentery of stomach | 3.57e-07 | 6 |
gut mesentery | 3.57e-07 | 6 |
dorsal mesentery | 3.57e-07 | 6 |
dorsal mesogastrium | 3.57e-07 | 6 |
peritoneal cavity | 3.57e-07 | 6 |
spleen primordium | 3.57e-07 | 6 |
hemolymphoid system | 9.10e-07 | 48 |
immune system | 9.10e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.81e-15 | 3 |
muscle cancer | 9.81e-15 | 3 |
organ system cancer | 1.28e-07 | 6 |