FFCP PHASE1:Hg19::chr8:107670064..107670132,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15822 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N573,E5RFD1 | |||
|association_with_transcript=0bp_to_ENST00000312046,ENST00000438229,uc003ymi.1_5end | |||
|cluster_id=chr8:107670064..107670132,+ | |||
|description=CAGE_peak_2_at_OXR1_5end | |||
|id=chr8:107670064..107670132,+ | |||
|ontology_enrichment_celltype=CL:0000037!9.03e-33!172;CL:0000566!9.03e-33!172;CL:0002032!2.63e-30!165;CL:0000837!2.63e-30!165;CL:0000738!4.34e-28!140;CL:0000988!8.83e-27!182;CL:0002031!1.48e-24!124;CL:0002087!6.36e-23!119;CL:0000763!1.03e-21!112;CL:0000049!1.03e-21!112;CL:0000557!8.33e-18!71;CL:0000766!1.34e-17!76;CL:0000839!1.66e-16!70;CL:0002009!2.39e-15!65;CL:0002194!1.79e-14!63;CL:0000576!1.79e-14!63;CL:0000040!1.79e-14!63;CL:0000559!1.79e-14!63;CL:0002057!7.93e-12!42;CL:0000860!1.35e-11!45;CL:0000542!4.12e-08!53;CL:0000051!4.12e-08!53;CL:0000838!9.06e-08!52;CL:0000236!5.68e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000576;4.10e-09;48!CL:0000766;1.14e-08;69!CL:0000860;2.62e-07;33!CL:0002057;2.62e-07;33!CL:0000473;3.03e-07;39!CL:0000234;3.03e-07;39!CL:0000763;3.49e-07;100!CL:0002087;3.53e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.82e-33,168;CL:0002032,2.85e-30,161;CL:0000837,2.85e-30,161;CL:0000738,4.18e-28,136;CL:0000988,2.45e-27,177;CL:0002031,1.37e-24,120;CL:0002087,5.94e-23,115;CL:0000763,9.10e-22,108;CL:0000049,9.10e-22,108;CL:0000557,5.17e-18,67;CL:0000766,9.31e-18,72;CL:0000839,1.12e-16,66;CL:0002009,1.59e-15,61;CL:0002194,1.22e-14,59;CL:0000576,1.22e-14,59;CL:0000040,1.22e-14,59;CL:0000559,1.22e-14,59;CL:0000473,1.14e-12,48;CL:0000234,1.14e-12,48;CL:0000860,7.93e-12,42;CL:0002057,7.93e-12,42;CL:0000542,4.12e-08,53;CL:0000051,4.12e-08,53;CL:0000838,9.06e-08,52;CL:0000236,5.68e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;6.64e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.11e-19!102;UBERON:0003061!8.11e-19!102;UBERON:0001474!1.33e-16!86;UBERON:0002193!1.55e-16!112;UBERON:0002371!1.93e-15!80;UBERON:0004765!1.03e-13!101;UBERON:0001434!1.03e-13!101;UBERON:0002405!6.18e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.49e-19,98;UBERON:0003061,7.49e-19,98;UBERON:0001474,1.14e-16,82;UBERON:0002193,1.70e-16,108;UBERON:0002371,1.64e-15,76;UBERON:0002405,2.46e-15,93;UBERON:0004765,3.61e-14,90;UBERON:0001434,9.46e-13,100 | |||
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| |||
|short_description=p2@OXR1 | |||
}} |
Latest revision as of 02:30, 25 September 2015
Short description: | p2@OXR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_OXR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000312046, ENST00000438229, uc003ymi.1_5end |
EntrezGene: | OXR1 |
HGNC: | 15822 |
UniProt: | Q8N573E5RFD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.82e-33 | 168 |
hematopoietic oligopotent progenitor cell | 2.85e-30 | 161 |
hematopoietic multipotent progenitor cell | 2.85e-30 | 161 |
leukocyte | 4.18e-28 | 136 |
hematopoietic cell | 2.45e-27 | 177 |
hematopoietic lineage restricted progenitor cell | 1.37e-24 | 120 |
nongranular leukocyte | 5.94e-23 | 115 |
myeloid cell | 9.10e-22 | 108 |
common myeloid progenitor | 9.10e-22 | 108 |
granulocyte monocyte progenitor cell | 5.17e-18 | 67 |
myeloid leukocyte | 9.31e-18 | 72 |
myeloid lineage restricted progenitor cell | 1.12e-16 | 66 |
macrophage dendritic cell progenitor | 1.59e-15 | 61 |
monopoietic cell | 1.22e-14 | 59 |
monocyte | 1.22e-14 | 59 |
monoblast | 1.22e-14 | 59 |
promonocyte | 1.22e-14 | 59 |
defensive cell | 1.14e-12 | 48 |
phagocyte | 1.14e-12 | 48 |
classical monocyte | 7.93e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.93e-12 | 42 |
lymphocyte | 4.12e-08 | 53 |
common lymphoid progenitor | 4.12e-08 | 53 |
lymphoid lineage restricted progenitor cell | 9.06e-08 | 52 |
B cell | 5.68e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.49e-19 | 98 |
blood island | 7.49e-19 | 98 |
bone element | 1.14e-16 | 82 |
hemolymphoid system | 1.70e-16 | 108 |
bone marrow | 1.64e-15 | 76 |
immune system | 2.46e-15 | 93 |
skeletal element | 3.61e-14 | 90 |
skeletal system | 9.46e-13 | 100 |