FFCP PHASE1:Hg19::chr8:11660207..11660221,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2222 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3629 | |||
|TSSclassifier=strong | |||
|UniProt=P37268,Q6IAX1 | |||
|association_with_transcript=17bp_to_NM_004462,uc003wui.2,uc010lsa.1,uc011kxe.1,uc011kxf.1_5end | |||
|cluster_id=chr8:11660207..11660221,+ | |||
|description=CAGE_peak_3_at_FDFT1_5end | |||
|id=chr8:11660207..11660221,+ | |||
|ontology_enrichment_celltype=CL:0000048!1.76e-07!430 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.01e-08,427;CL:0000723,3.66e-07,433;CL:0000219,4.97e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!3.29e-10!39;DOID:2531!1.14e-09!51;DOID:0060083!1.14e-09!51;DOID:8692!4.51e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.72e-09;31!DOID:1240;3.20e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.29e-10,39;DOID:2531,1.14e-09,51;DOID:0060083,1.14e-09,51;DOID:8692,4.51e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.53e-16!57;UBERON:0005068!1.53e-16!57;UBERON:0006241!1.53e-16!57;UBERON:0007135!1.53e-16!57;UBERON:0000073!3.32e-16!94;UBERON:0001016!3.32e-16!94;UBERON:0001017!4.74e-16!82;UBERON:0002616!7.43e-16!59;UBERON:0005743!1.69e-15!86;UBERON:0002346!7.74e-15!90;UBERON:0000955!9.45e-15!69;UBERON:0006238!9.45e-15!69;UBERON:0003075!2.93e-14!86;UBERON:0007284!2.93e-14!86;UBERON:0002020!1.27e-12!34;UBERON:0003528!1.27e-12!34;UBERON:0001893!1.48e-12!34;UBERON:0001869!1.59e-12!32;UBERON:0003080!1.99e-12!42;UBERON:0003056!2.20e-12!61;UBERON:0002791!4.02e-12!33;UBERON:0002780!6.25e-12!41;UBERON:0001890!6.25e-12!41;UBERON:0006240!6.25e-12!41;UBERON:0000956!6.64e-10!25;UBERON:0000203!6.64e-10!25;UBERON:0000033!6.99e-10!123;UBERON:0000153!8.77e-10!129;UBERON:0007811!8.77e-10!129;UBERON:0002619!6.33e-09!22;UBERON:0000924!1.55e-08!173;UBERON:0006601!1.55e-08!173;UBERON:0001950!2.41e-08!20;UBERON:0004121!4.69e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.88e-11;32!UBERON:0001893;4.07e-11;34!UBERON:0003528;4.15e-11;34!UBERON:0002020;4.15e-11;34!UBERON:0002791;1.63e-10;32!UBERON:0000956;6.74e-10;25!UBERON:0000203;6.74e-10;25!UBERON:0002619;7.01e-09;22!UBERON:0000073;1.03e-08;53!UBERON:0002616;1.03e-08;53!UBERON:0002780;1.26e-08;41!UBERON:0001890;1.26e-08;41!UBERON:0001950;2.41e-08;20!UBERON:0001017;4.82e-07;75!UBERON:0000955;6.89e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.93e-16,89;UBERON:0001049,4.94e-16,56;UBERON:0005068,4.94e-16,56;UBERON:0006241,4.94e-16,56;UBERON:0007135,4.94e-16,56;UBERON:0001017,1.39e-15,81;UBERON:0002346,2.10e-15,86;UBERON:0000073,5.01e-15,53;UBERON:0002616,5.01e-15,53;UBERON:0003075,7.88e-15,82;UBERON:0007284,7.88e-15,82;UBERON:0000955,2.79e-14,68;UBERON:0006238,2.79e-14,68;UBERON:0003528,1.27e-12,34;UBERON:0002020,1.27e-12,34;UBERON:0001893,1.48e-12,34;UBERON:0001869,1.59e-12,32;UBERON:0003056,2.28e-12,61;UBERON:0010314,4.31e-12,132;UBERON:0002780,6.25e-12,41;UBERON:0001890,6.25e-12,41;UBERON:0003080,6.25e-12,41;UBERON:0006240,6.25e-12,41;UBERON:0002791,1.03e-11,32;UBERON:0000956,6.64e-10,25;UBERON:0000203,6.64e-10,25;UBERON:0010371,5.96e-09,104;UBERON:0002619,6.33e-09,22;UBERON:0004121,1.90e-08,171;UBERON:0000924,1.90e-08,171;UBERON:0006601,1.90e-08,171;UBERON:0001950,2.41e-08,20 | |||
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| |||
|short_description=p3@FDFT1 | |||
}} |
Latest revision as of 06:29, 25 September 2015
Short description: | p3@FDFT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FDFT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_NM_004462, uc003wui.2, uc010lsa.1, uc011kxe.1, uc011kxf.1_5end |
EntrezGene: | FDFT1 |
HGNC: | 3629 |
UniProt: | P37268Q6IAX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.01e-08 | 427 |
somatic stem cell | 3.66e-07 | 433 |
motile cell | 4.97e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.93e-16 | 89 |
neural tube | 4.94e-16 | 56 |
neural rod | 4.94e-16 | 56 |
future spinal cord | 4.94e-16 | 56 |
neural keel | 4.94e-16 | 56 |
central nervous system | 1.39e-15 | 81 |
neurectoderm | 2.10e-15 | 86 |
regional part of nervous system | 5.01e-15 | 53 |
regional part of brain | 5.01e-15 | 53 |
neural plate | 7.88e-15 | 82 |
presumptive neural plate | 7.88e-15 | 82 |
brain | 2.79e-14 | 68 |
future brain | 2.79e-14 | 68 |
brain grey matter | 1.27e-12 | 34 |
gray matter | 1.27e-12 | 34 |
telencephalon | 1.48e-12 | 34 |
cerebral hemisphere | 1.59e-12 | 32 |
pre-chordal neural plate | 2.28e-12 | 61 |
structure with developmental contribution from neural crest | 4.31e-12 | 132 |
regional part of forebrain | 6.25e-12 | 41 |
forebrain | 6.25e-12 | 41 |
anterior neural tube | 6.25e-12 | 41 |
future forebrain | 6.25e-12 | 41 |
regional part of telencephalon | 1.03e-11 | 32 |
cerebral cortex | 6.64e-10 | 25 |
pallium | 6.64e-10 | 25 |
ecto-epithelium | 5.96e-09 | 104 |
regional part of cerebral cortex | 6.33e-09 | 22 |
ectoderm-derived structure | 1.90e-08 | 171 |
ectoderm | 1.90e-08 | 171 |
presumptive ectoderm | 1.90e-08 | 171 |
neocortex | 2.41e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.29e-10 | 39 |
hematologic cancer | 1.14e-09 | 51 |
immune system cancer | 1.14e-09 | 51 |
myeloid leukemia | 4.51e-09 | 31 |