FFCP PHASE1:Mm9::chr4:133899797..133899824,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=230810|HGNC=|MCL_coexpression_id=1611|UniProt=D3Z5N1|association_with_transcript=173bp_to_ENSMUST00000081094,uc008vev.1_5end|description=CAGE_peak_5_at_Slc30a2_5end|id=chr4:133899797..133899824,+|ontology_enrichment_celltype=CL:0002563!4.14e-10!9;CL:0002251!4.14e-10!9;CL:0000239!8.83e-08!6;CL:0000677!8.83e-08!6;CL:0000212!8.83e-08!6;CL:0000584!8.83e-08!6|ontology_enrichment_celltype_v019_2=CL:0000239,9.38e-10,6;CL:0000677,9.38e-10,6;CL:0000584,9.38e-10,6;CL:0002563,9.59e-09,9;CL:0002251,9.59e-09,9;CL:0000682,1.35e-08,3;CL:0000075,2.65e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.49e-17!15;UBERON:0000160!5.21e-17!43;UBERON:0004923!6.18e-15!24;UBERON:0001242!8.99e-15!13;UBERON:0000060!8.99e-15!13;UBERON:0001262!8.99e-15!13;UBERON:0004786!8.99e-15!13;UBERON:0005409!1.40e-11!59;UBERON:0003101!7.53e-11!16;UBERON:0000079!7.53e-11!16;UBERON:0003135!2.95e-10!15;UBERON:0003350!4.14e-10!9;UBERON:0004808!4.14e-10!9;UBERON:0001277!4.14e-10!9;UBERON:0000473!3.69e-09!14;UBERON:0003133!3.75e-09!24;UBERON:0005156!3.75e-09!26;UBERON:0000990!3.75e-09!26;UBERON:0003064!5.13e-08!14;UBERON:0000485!7.78e-08!11;UBERON:0002369!1.04e-07!7;UBERON:0006858!1.04e-07!7;UBERON:0000991!1.65e-07!18;UBERON:0005564!1.65e-07!18;UBERON:0004176!5.40e-07!17;UBERON:0009196!5.40e-07!17;UBERON:0009117!5.40e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.23e-25,31;UBERON:0000344,8.20e-21,15;UBERON:0004923,1.09e-16,24;UBERON:0001242,1.37e-16,13;UBERON:0001262,1.37e-16,13;UBERON:0004786,1.37e-16,13;UBERON:0005409,3.04e-15,47;UBERON:0002108,3.82e-10,4;UBERON:0003350,9.59e-09,9;UBERON:0004808,9.59e-09,9;UBERON:0001277,9.59e-09,9;UBERON:0000331,4.30e-08,3;UBERON:0002116,4.30e-08,3;UBERON:0001204,4.30e-08,3;UBERON:0001168,4.30e-08,3;UBERON:0000485,5.05e-07,11|phase1_expression=0,5.93258192986914,15.9249733786338,0.90739263392049,1.00179145989269,2.35030980676646,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,4.47978783821539,6.19405058881359,9.18771142584032,8.18447792702242,6.24866574789078,3.23039813075836,2.52030129759931,9.3126814475228,0,0,0,0.577703239502549,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,3.71105347662062,0.346970653532272,0.608930956624282,1.61430848079241,1.50722640552623,0.940709657085638,2.38766523526383,10.1349936771093,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.611036183101898,1.11966273549084,6.06534620240819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,2.3800550999719,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,2.37264530772256,1.4822905925161,2.26201687920243,1.59165177632921,1.9496408711912,6.29173586057955,0.864552199498777,3.58454291857861,0,0,0,0,0,0.210407459670956,0.316182685621286,1.03327103585722,0.470996183524124,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0.948110273807448,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.21183207086382,0.220528398054962,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,1.12738587736838,0,0.165458490457098,0.972255941720238,1.29159823477731,0.675824501963113,0.352071715937262,1.3020438484395,1.8874681996628,2.41584120826006,0.864090018773596,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p5@Slc30a2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230810 | |||
|HGNC= | |||
|MCL_coexpression_id=1611 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z5N1 | |||
|association_with_transcript=173bp_to_ENSMUST00000081094,uc008vev.1_5end | |||
|cluster_id=chr4:133899797..133899824,+ | |||
|description=CAGE_peak_5_at_Slc30a2_5end | |||
|id=chr4:133899797..133899824,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.14e-10!9;CL:0002251!4.14e-10!9;CL:0000239!8.83e-08!6;CL:0000677!8.83e-08!6;CL:0000212!8.83e-08!6;CL:0000584!8.83e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.38e-10,6;CL:0000677,9.38e-10,6;CL:0000584,9.38e-10,6;CL:0002563,9.59e-09,9;CL:0002251,9.59e-09,9;CL:0000682,1.35e-08,3;CL:0000075,2.65e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.49e-17!15;UBERON:0000160!5.21e-17!43;UBERON:0004923!6.18e-15!24;UBERON:0001242!8.99e-15!13;UBERON:0000060!8.99e-15!13;UBERON:0001262!8.99e-15!13;UBERON:0004786!8.99e-15!13;UBERON:0005409!1.40e-11!59;UBERON:0003101!7.53e-11!16;UBERON:0000079!7.53e-11!16;UBERON:0003135!2.95e-10!15;UBERON:0003350!4.14e-10!9;UBERON:0004808!4.14e-10!9;UBERON:0001277!4.14e-10!9;UBERON:0000473!3.69e-09!14;UBERON:0003133!3.75e-09!24;UBERON:0005156!3.75e-09!26;UBERON:0000990!3.75e-09!26;UBERON:0003064!5.13e-08!14;UBERON:0000485!7.78e-08!11;UBERON:0002369!1.04e-07!7;UBERON:0006858!1.04e-07!7;UBERON:0000991!1.65e-07!18;UBERON:0005564!1.65e-07!18;UBERON:0004176!5.40e-07!17;UBERON:0009196!5.40e-07!17;UBERON:0009117!5.40e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.23e-25,31;UBERON:0000344,8.20e-21,15;UBERON:0004923,1.09e-16,24;UBERON:0001242,1.37e-16,13;UBERON:0001262,1.37e-16,13;UBERON:0004786,1.37e-16,13;UBERON:0005409,3.04e-15,47;UBERON:0002108,3.82e-10,4;UBERON:0003350,9.59e-09,9;UBERON:0004808,9.59e-09,9;UBERON:0001277,9.59e-09,9;UBERON:0000331,4.30e-08,3;UBERON:0002116,4.30e-08,3;UBERON:0001204,4.30e-08,3;UBERON:0001168,4.30e-08,3;UBERON:0000485,5.05e-07,11 | |||
|phase1_expression=0,5.93258192986914,15.9249733786338,0.90739263392049,1.00179145989269,2.35030980676646,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,4.47978783821539,6.19405058881359,9.18771142584032,8.18447792702242,6.24866574789078,3.23039813075836,2.52030129759931,9.3126814475228,0,0,0,0.577703239502549,1.32987716286794,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,3.71105347662062,0.346970653532272,0.608930956624282,1.61430848079241,1.50722640552623,0.940709657085638,2.38766523526383,10.1349936771093,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0.611036183101898,1.11966273549084,6.06534620240819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,2.3800550999719,0,0,0,0.201683524623343,0.667134131534611,0.570676878337677,2.37264530772256,1.4822905925161,2.26201687920243,1.59165177632921,1.9496408711912,6.29173586057955,0.864552199498777,3.58454291857861,0,0,0,0,0,0.210407459670956,0.316182685621286,1.03327103585722,0.470996183524124,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0.948110273807448,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.21183207086382,0.220528398054962,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,1.12738587736838,0,0.165458490457098,0.972255941720238,1.29159823477731,0.675824501963113,0.352071715937262,1.3020438484395,1.8874681996628,2.41584120826006,0.864090018773596,0,0,0,0.129920822977795,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p5@Slc30a2 | |||
}} |
Latest revision as of 12:11, 26 September 2015
Short description: | p5@Slc30a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc30a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1611 |
Association with transcript: | 173bp_to_ENSMUST00000081094, uc008vev.1_5end |
EntrezGene: | Slc30a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.38e-10 | 6 |
gut absorptive cell | 9.38e-10 | 6 |
enterocyte | 9.38e-10 | 6 |
intestinal epithelial cell | 9.59e-09 | 9 |
epithelial cell of alimentary canal | 9.59e-09 | 9 |
M cell of gut | 1.35e-08 | 3 |
columnar/cuboidal epithelial cell | 2.65e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.23e-25 | 31 |
mucosa | 8.20e-21 | 15 |
organ component layer | 1.09e-16 | 24 |
intestinal mucosa | 1.37e-16 | 13 |
wall of intestine | 1.37e-16 | 13 |
gastrointestinal system mucosa | 1.37e-16 | 13 |
gastrointestinal system | 3.04e-15 | 47 |
small intestine | 3.82e-10 | 4 |
epithelium of mucosa | 9.59e-09 | 9 |
gastrointestinal system epithelium | 9.59e-09 | 9 |
intestinal epithelium | 9.59e-09 | 9 |
ileal mucosa | 4.30e-08 | 3 |
ileum | 4.30e-08 | 3 |
mucosa of small intestine | 4.30e-08 | 3 |
wall of small intestine | 4.30e-08 | 3 |
simple columnar epithelium | 5.05e-07 | 11 |