FFCP PHASE1:Hg19::chr8:145634666..145634725,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2324 | |||
|TSSclassifier=strong | |||
|UniProt=E9PIM1 | |||
|association_with_transcript=0bp_to_ENST00000531042_5end | |||
|cluster_id=chr8:145634666..145634725,- | |||
|description=CAGE_peak_1_at_CPSF1_5end | |||
|id=chr8:145634666..145634725,- | |||
|ontology_enrichment_celltype=CL:0000115!2.56e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:1000449;7.18e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.02e-07,36;CL:0002078,5.37e-07,45;CL:1000449,7.08e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.47e-08!31;DOID:2531!6.34e-08!51;DOID:0060083!6.34e-08!51;DOID:1240!7.03e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.18e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.47e-08,31;DOID:2531,6.34e-08,51;DOID:0060083,6.34e-08,51;DOID:1240,7.03e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.18e-07;15!UBERON:0004819;7.18e-07;15!UBERON:0001285;7.18e-07;15!UBERON:0007684;7.18e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.08e-07,15;UBERON:0009773,7.08e-07,15;UBERON:0001231,7.08e-07,15;UBERON:0001285,7.08e-07,15;UBERON:0007684,7.08e-07,15;UBERON:0004208,7.08e-07,15 | |||
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| |||
|short_description=p1@CPSF1 | |||
}} |
Latest revision as of 01:48, 17 September 2015
Short description: | p1@CPSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531042_5end |
EntrezGene: | CPSF1 |
HGNC: | 2324 |
UniProt: | E9PIM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.02e-07 | 36 |
meso-epithelial cell | 5.37e-07 | 45 |
epithelial cell of nephron | 7.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 7.08e-07 | 15 |
renal tubule | 7.08e-07 | 15 |
nephron tubule | 7.08e-07 | 15 |
nephron | 7.08e-07 | 15 |
uriniferous tubule | 7.08e-07 | 15 |
nephrogenic mesenchyme | 7.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.47e-08 | 31 |
hematologic cancer | 6.34e-08 | 51 |
immune system cancer | 6.34e-08 | 51 |
leukemia | 7.03e-08 | 39 |