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FFCP PHASE1:Mm9::chr4:14791170..14791190,+: Difference between revisions

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{{FFCP|EntrezGene=72519|HGNC=|UniProt=Q9CZX7|association_with_transcript=-32bp_to_ENSMUST00000029875_5end|description=CAGE_peak_3_at_Tmem55a_5end|id=chr4:14791170..14791190,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.99e-09!73;UBERON:0005743!5.99e-09!73;UBERON:0000033!1.12e-08!63;UBERON:0004121!2.48e-08!102;UBERON:0000924!2.48e-08!102;UBERON:0006601!2.48e-08!102;UBERON:0000073!3.22e-08!75;UBERON:0001016!3.22e-08!75;UBERON:0000468!1.21e-07!333;UBERON:0002346!2.24e-07!71;UBERON:0003075!2.24e-07!71;UBERON:0007284!2.24e-07!71;UBERON:0001049!2.43e-07!52;UBERON:0005068!2.43e-07!52;UBERON:0006241!2.43e-07!52;UBERON:0007135!2.43e-07!52;UBERON:0000955!4.48e-07!50;UBERON:0006238!4.48e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.97e-09,73;UBERON:0004121,8.69e-09,95;UBERON:0000924,8.69e-09,95;UBERON:0006601,8.69e-09,95;UBERON:0000073,2.61e-08,54;UBERON:0001016,3.22e-08,75;UBERON:0010371,4.19e-08,73;UBERON:0002346,5.16e-08,64;UBERON:0003075,5.16e-08,64;UBERON:0007284,5.16e-08,64;UBERON:0001049,2.42e-07,52;UBERON:0005068,2.42e-07,52;UBERON:0006241,2.42e-07,52;UBERON:0007135,2.42e-07,52;UBERON:0010314,3.25e-07,92|phase1_expression=8.96833543786846,2.09385244583617,3.18499467572675,1.51232105653415,1.50268718983904,1.17515490338323,1.16806320297763,1.93684985162364,0,0,0.171217968225505,0.319088635981346,2.22560948910567,2.53519167015092,3.33109761815663,3.64455481301687,4.89693314689703,0.630924330716475,1.09691546884591,1.69755860719212,3.91199134694921,1.88652807281682,3.13439746966722,2.3998863419011,1.14704640533585,1.14846392823004,1.29228598847722,1.939241094173,1.33016393619462,1.00812051903972,0.221730510655305,1.27006134691926,3.69038872550742,15.8481681015439,2.59966457776147,2.65975432573588,3.26670970019791,0,1.5626706890476,1.57057123192139,1.17646297606203,0,0,1.1330713617802,1.31790010585369,3.12029478674859,7.04152209913235,8.93903141159831,5.71184075109627,8.74934545834275,4.05960622713551,4.31257693094915,0.671130424230945,0.725362142011344,1.34437519656986,1.80081605225163,2.29226751951005,3.09403255366465,6.27181028664753,5.81890077199236,8.23980824558033,4.74382344896785,4.4464739805557,2.6996991518442,4.94433181283487,4.2628806896766,5.09320187881288,7.30014780110954,3.52544681848824,4.45519596494579,2.94454945891935,8.85518051651791,6.40518768759679,4.28717797252339,5.07980996396653,5.51531271966013,6.60695285996332,8.2996769755372,9.36999852863085,7.12185953743047,7.593474419,7.29278718779464,5.30447698102624,2.8138130501584,7.79271063661732,12.0797720044204,14.0947963991112,6.89677949553612,1.74170244666323,3.32514864469856,4.92769630792852,1.72084775396277,3.39985666853875,2.15881276655127,0,5.82434953226536,3.7919993435573,1.53387290320252,1.03914401841148,1.41335829804136,6.4787973097273,2.56652954828636,12.7402619853323,0,1.08245520505607,1.77351905832569,3.0331466700887,1.48439043634778,9.06282592765101,4.45326417194474,6.59244241711316,5.1759131313064,5.30415643688935,3.61734337326294,4.9387256996996,2.38766523526383,1.73036477414062,4.48258006451726,4.42305275974937,6.30890714794896,5.07935492458905,7.27312879702833,3.72783522436244,7.31951992528868,7.54008144528438,1.78819938646014,3.47463861067169,4.79922184794726,2.28726408731516,6.74057877321702,5.94750783664214,3.8952849154988,8.51739168942155,4.85859368927628,9.55825004973976,5.353961681236,5.29564692021645,3.6078021476927,5.55990068554084,4.62972082950243,9.88915366516548,8.73627996847197,6.12211241338187,5.87748789559289,5.91917542616552,6.02134485338794,6.37171727006156,7.24369438069244,14.2274875335676,13.9938499324186,10.9089696981648,12.4941567483718,13.3462679628287,8.00979983000983,5.76189981942242,5.9710280045548,1.40442637462647,3.3455227924913,2.27330799516474,7.04227626620706,9.61556845922494,5.94204802821349,8.28606574548236,7.28027657465394,5.86215028972037,7.44108623201305,6.9751084363901,4.67061369468678,5.43047504714485,4.26835406605648,3.24275238183423,1.90059983652932,2.19550115291051,3.08674763148855,5.46753866266731,4.6307075570678,1.98251269790279,1.58670339998127,9.59797127408553,6.96710015581316,6.44337306610467,5.84882221407693,5.11469500843202,3.42406127002606,1.42358718463353,3.45867804920423,2.76468729680296,2.58643413653496,1.9496408711912,1.79763881730844,2.59365659849633,0.597423819763102,6.2590407314517,5.82667414309617,9.01661885384643,6.72049381889537,8.33995694820791,5.89140887078676,4.99568643281633,5.16635517928608,3.767969468193,3.20832626196681,2.66807364378434,10.8449318715461,7.27268281918851,4.72210436008193,6.49152388443209,6.02942899381042,5.34714288740982,5.4662266115654,3.40483976227574,2.47105271869273,8.62609239164127,3.34926852901653,2.80833905803104,1.26289438973556,3.58794827043824,1.92977408545347,6.46636165583116,6.253216588426,9.4519686336375,6.45031325945715,7.51008794523207,7.87279409976534,7.61739650835244,7.80534591431195,5.832500331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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72519
|HGNC=
|TSSclassifier=NA
|UniProt=Q9CZX7
|association_with_transcript=-32bp_to_ENSMUST00000029875_5end
|cluster_id=chr4:14791170..14791190,+
|description=CAGE_peak_3_at_Tmem55a_5end
|id=chr4:14791170..14791190,+
|ontology_enrichment_celltype=
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|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.97e-09,73;UBERON:0004121,8.69e-09,95;UBERON:0000924,8.69e-09,95;UBERON:0006601,8.69e-09,95;UBERON:0000073,2.61e-08,54;UBERON:0001016,3.22e-08,75;UBERON:0010371,4.19e-08,73;UBERON:0002346,5.16e-08,64;UBERON:0003075,5.16e-08,64;UBERON:0007284,5.16e-08,64;UBERON:0001049,2.42e-07,52;UBERON:0005068,2.42e-07,52;UBERON:0006241,2.42e-07,52;UBERON:0007135,2.42e-07,52;UBERON:0010314,3.25e-07,92
|phase1_expression=8.96833543786846,2.09385244583617,3.18499467572675,1.51232105653415,1.50268718983904,1.17515490338323,1.16806320297763,1.93684985162364,0,0,0.171217968225505,0.319088635981346,2.22560948910567,2.53519167015092,3.33109761815663,3.64455481301687,4.89693314689703,0.630924330716475,1.09691546884591,1.69755860719212,3.91199134694921,1.88652807281682,3.13439746966722,2.3998863419011,1.14704640533585,1.14846392823004,1.29228598847722,1.939241094173,1.33016393619462,1.00812051903972,0.221730510655305,1.27006134691926,3.69038872550742,15.8481681015439,2.59966457776147,2.65975432573588,3.26670970019791,0,1.5626706890476,1.57057123192139,1.17646297606203,0,0,1.1330713617802,1.31790010585369,3.12029478674859,7.04152209913235,8.93903141159831,5.71184075109627,8.74934545834275,4.05960622713551,4.31257693094915,0.671130424230945,0.725362142011344,1.34437519656986,1.80081605225163,2.29226751951005,3.09403255366465,6.27181028664753,5.81890077199236,8.23980824558033,4.74382344896785,4.4464739805557,2.6996991518442,4.94433181283487,4.2628806896766,5.09320187881288,7.30014780110954,3.52544681848824,4.45519596494579,2.94454945891935,8.85518051651791,6.40518768759679,4.28717797252339,5.07980996396653,5.51531271966013,6.60695285996332,8.2996769755372,9.36999852863085,7.12185953743047,7.593474419,7.29278718779464,5.30447698102624,2.8138130501584,7.79271063661732,12.0797720044204,14.0947963991112,6.89677949553612,1.74170244666323,3.32514864469856,4.92769630792852,1.72084775396277,3.39985666853875,2.15881276655127,0,5.82434953226536,3.7919993435573,1.53387290320252,1.03914401841148,1.41335829804136,6.4787973097273,2.56652954828636,12.7402619853323,0,1.08245520505607,1.77351905832569,3.0331466700887,1.48439043634778,9.06282592765101,4.45326417194474,6.59244241711316,5.1759131313064,5.30415643688935,3.61734337326294,4.9387256996996,2.38766523526383,1.73036477414062,4.48258006451726,4.42305275974937,6.30890714794896,5.07935492458905,7.27312879702833,3.72783522436244,7.31951992528868,7.54008144528438,1.78819938646014,3.47463861067169,4.79922184794726,2.28726408731516,6.74057877321702,5.94750783664214,3.8952849154988,8.51739168942155,4.85859368927628,9.55825004973976,5.353961681236,5.29564692021645,3.6078021476927,5.55990068554084,4.62972082950243,9.88915366516548,8.73627996847197,6.12211241338187,5.87748789559289,5.91917542616552,6.02134485338794,6.37171727006156,7.24369438069244,14.2274875335676,13.9938499324186,10.9089696981648,12.4941567483718,13.3462679628287,8.00979983000983,5.76189981942242,5.9710280045548,1.40442637462647,3.3455227924913,2.27330799516474,7.04227626620706,9.61556845922494,5.94204802821349,8.28606574548236,7.28027657465394,5.86215028972037,7.44108623201305,6.9751084363901,4.67061369468678,5.43047504714485,4.26835406605648,3.24275238183423,1.90059983652932,2.19550115291051,3.08674763148855,5.46753866266731,4.6307075570678,1.98251269790279,1.58670339998127,9.59797127408553,6.96710015581316,6.44337306610467,5.84882221407693,5.11469500843202,3.42406127002606,1.42358718463353,3.45867804920423,2.76468729680296,2.58643413653496,1.9496408711912,1.79763881730844,2.59365659849633,0.597423819763102,6.2590407314517,5.82667414309617,9.01661885384643,6.72049381889537,8.33995694820791,5.89140887078676,4.99568643281633,5.16635517928608,3.767969468193,3.20832626196681,2.66807364378434,10.8449318715461,7.27268281918851,4.72210436008193,6.49152388443209,6.02942899381042,5.34714288740982,5.4662266115654,3.40483976227574,2.47105271869273,8.62609239164127,3.34926852901653,2.80833905803104,1.26289438973556,3.58794827043824,1.92977408545347,6.46636165583116,6.253216588426,9.4519686336375,6.45031325945715,7.51008794523207,7.87279409976534,7.61739650835244,7.80534591431195,5.83250033192907,5.75808193086815,5.58091690301205,5.40748938561935,5.69860440157455,3.61622646453779,4.52373851817817,2.17562273527484,2.95058563811422,3.86311444826625,5.77982123956051,3.8679856575427,5.73772308818364,7.06918596172244,2.83957397474631,2.34263246577983,5.17016154558717,5.01834475700359,6.90675889655422,10.190755108398,3.64329631507405,4.67609372658099,4.74345333535828,12.5315313404505,4.9679029822894,5.1639025063504,5.53815661802159,5.44401405809367,5.30980553359851,7.28341908464944,6.65111825322452,6.22396763194464,5.61073596473468,4.30409207121498,3.35956781118687,5.08947221268508,4.63446591900138,1.8962205476149,1.05418608574999,3.09406629744561,7.14923172082955,8.28281032544027,7.1147276080515,7.28745919107414,8.51233121482913,7.49149033928696,6.58196082408484,7.30715877875038,2.11204537257339,0.63549621259146,1.10264199027481,8.07942639413252,5.65125493435669,6.6947346670253,4.17803204010978,2.62625439592098,1.45740418314925,5.56275906031529,4.44264290074417,7.22354037871279,7.59297562215818,3.39063222608444,4.51090951479383,4.57556346413045,3.0596117398894,3.07893195112048,2.21119958087078,8.59203556213602,10.2809197913869,7.1161813494397,5.07625101862466,6.48173717644853,4.36725127492355,3.2367443132357,3.80205896336545,1.57053565190418,1.03691978633434,4.34937519160848,0.56369293868419,6.57872802593507,4.30192075188454,5.44463327363333,2.97067593998782,6.08242051766801,6.57200536416222,3.77592716047455,3.04092098834561,1.93267296660805,2.01621004380506,1.89606672376907,4.25722952109345,4.41657115808757,3.50786222040047,5.54982756569192,2.98022032171897,0.961563596159751,1.77227432609493,2.3222283488074,1.600342939755,1.00826185136841,1.65678397257579,1.92423683280659,0.935015217452552,3.62768613784338,1.10992976687032,0.538283139656854,0.335769232728157,3.86379188064381,2.064507229963,4.2124873581471,3.64426244434412,2.00628841614145,5.64751842617067,5.06357760157895,3.43737308063638,9.6237782112465,4.7955776383945,9.06472676867641,5.40018000185445,7.65546045481175,4.07828168085784,6.73088405277366,11.6241829294278,10.3746467084268,8.53668028770671,9.48116196566347,7.1268475293514,9.74370594785075,5.11167473943715,7.62329711783909,6.09746498224449,7.58091635291392,7.60437899670719,8.29955902098735,6.55490552289177,6.21043978327232,6.94969174362921,7.1444053692461,6.60540657885676,7.5234595980845,5.76920261124629,7.50714492685426,8.57173130963539,6.56660482789549,6.91464950847231,8.72078499793971,5.8347815857505,7.86915853392591,7.3171189149109,6.05060336307039,6.51859746460137,9.53941861818155,6.28765596058123,4.82671963640261,6.95692773388472,6.35241048862461,7.13754460630223,6.74488560432454,7.25187986180766,7.95022899978704,13.0076065806813,4.85301122062934,5.33296021926969
|short_description=p3@Tmem55a
}}

Latest revision as of 17:18, 26 September 2015

Short description:p3@Tmem55a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tmem55a_5end
Coexpression cluster:NA
Association with transcript: -32bp_to_ENSMUST00000029875_5end
EntrezGene:Tmem55a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tmem55a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.54
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.90
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F93.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H99.06
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C14.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H14.48
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F56.31
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.47
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D58.52
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B25.56
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C69.89
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C96.12
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C65.92
eyeball, neonate N01.CNhs11140.1532-43E76.02
eyeball, neonate N02.CNhs11205.1551-44G86.37
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E214.23
forelimb, embryo E12.CNhs10600.359-14H213.99
forelimb, embryo E13.CNhs10589.384-1E210.91
forelimb, embryo E14.CNhs10577.413-26A812.49
forelimb, embryo E15.CNhs11007.437-20E713.35
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I65.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E97.04
heart, embryo E12.CNhs11015.353-12F59.62
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D48.29
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E57.44
heart, embryo E18.CNhs11030.1283-20G36.98
heart, neonate N00.CNhs11213.639-21E34.67
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H45.85
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.59
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F85.83
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G75.89
kidney, neonate N10.CNhs11206.758-6D55.00
kidney, neonate N20.CNhs11113.832-19I15.17
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F810.84
liver, embryo E13.CNhs10524.378-3H67.27
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F56.03
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F43.40
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F89.45
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E55.83
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E65.58
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C25.78
medulla oblongata, neonate N30.CNhs11200.1396-42A33.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.17
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.19
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I74.97
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G65.44
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E68.28
pituitary gland, embryo E13.CNhs11009.370-44C77.11
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B98.51
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C38.08
skin, neonate N00.CNhs11124.650-25G45.65
skin, neonate N03.CNhs11215.662-22H36.69
skin, neonate N06.CNhs11097.693-20I54.18
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C95.56
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C17.22
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.21
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E310.28
stomach, embryo E15.CNhs10603.1252-16G87.12
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B83.24
stomach, neonate N07.CNhs11210.718-18A93.80
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F56.58
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G56.08
testis, neonate N00.CNhs11189.1300-22B76.57
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I24.42
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F80.96
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.66
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I811.62
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F29.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.83
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C613.01
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B45.33





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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