FFCP PHASE1:Mm9::chr4:41702083..41702140,+: Difference between revisions
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{{FFCP|EntrezGene=14430|HGNC=|UniProt=A2AMS3,A2AMS2,Q03249|association_with_transcript=0bp_to_ENSMUST00000084695,ENSMUST00000108038,ENSMUST00000135734,ENSMUST00000151490,NM_016658,uc008sjn.1,uc008sjo.1_5end|description=CAGE_peak_5_at_Galt_5end|id=chr4:41702083..41702140,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.54e-08!51;UBERON:0002021!6.88e-08!10;UBERON:0000411!6.88e-08!10;UBERON:0001950!6.88e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.76e-09,51;UBERON:0002021,2.39e-08,10;UBERON:0000411,2.39e-08,10;UBERON:0001950,2.39e-08,10|phase1_expression=3.68342348341026,0.697950815278722,1.81999695755814,1.51232105653415,1.00179145989269,1.17515490338323,0.934450562382103,0.258246646883153,0.140788722151667,0.468129052643987,0,0,0.171200729931206,0.262261207256992,0,0.404950534779652,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,4.25216450755349,0,0.261199789138935,2.3998863419011,1.83527424853736,0.57423196411502,1.7230479846363,0.646413698057667,1.33016393619462,2.01624103807945,1.99557459589774,0,0,0,2.02196133825892,2.65975432573588,2.6542016314108,0,0,0,0,0,0,2.26614272356039,2.43304634926835,1.10128051297009,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,1.45072428402269,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0,0.122490799214954,0,0,0,0,0.307213066512487,0,0.182975287204819,0,0.558365998002762,0,0.45839474333043,0,0,0,0,0,1.15945795480671,5.16254326188832,0,0.539703191637817,11.695975514058,5.82434953226536,6.74133216632409,1.36344258062446,1.55871602761721,0.70667914902068,2.25349471642689,0,2.54805239706646,0,0.649473123033642,0.506719730950197,0,3.31133251185274,0.258937883647172,2.52351636410202,1.56136794089522,1.21786191324856,3.68984795609694,2.71300752994721,3.05730638552832,3.14166478324189,0.247194967734374,6.65157041831594,1.76922110389975,2.26473589926373,1.54589062922275,1.45462575940567,5.59175283654366,12.5895742714965,9.84399522023239,2.04365644166873,0.359445373517761,0.599902730993408,0.127070227073065,9.13722900369418,3.66000482254901,1.00523481690292,11.8200537730748,13.0414883238469,7.68815764870372,6.65189178577806,2.44414473240759,2.11491850037158,1.0108910337347,5.6819301089348,0.130120442962704,1.60931473103431,0.720248519221397,1.20563854268572,1.15662048557257,1.2811372028485,0.843315521037559,2.58703370739016,0,0.378212160335639,1.23165786914764,1.53437012699302,2.78047249225598,2.089512999133,2.26360350048738,0.796137067273973,0,0.257347907114715,0.284163499395593,0.207125772535502,0.469052119962192,1.08037236876609,1.65721314909647,2.55793501271625,2.31400669331067,4.65067889500816,5.09719462659276,3.15266424391358,3.78487654801005,6.23836363500562,5.26947262048062,6.72519942156529,5.04965265169416,7.1129401942997,9.67333763394985,1.74937841044784,3.30418782983798,2.64450566663544,0.213288250535234,0.232236671860439,0.77320476793256,2.01683524623343,0.889512175379481,1.71203063501303,3.32170343081158,1.15289268306808,2.26201687920243,3.58121649674071,3.70431765526328,4.49409704327111,3.02593269824572,3.78368419183298,0.569003702859245,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,2.52488951605147,3.35153646758564,6.05201606716369,5.02395929092399,6.66344685177723,11.5616524563988,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,1.01850340712568,1.72617682470486,1.78348749452539,4.3929826110093,2.87536413054709,4.83783231969054,7.17686648163489,17.4279425783507,12.9166137735777,20.2626278972614,2.58654466233247,0.189491411770485,0.651859905768103,1.18821560042632,0.938760993154008,1.67506257441816,1.6663054862021,2.14647012643579,1.7339865851681,1.55025282754142,2.55127629851979,3.60499292374624,2.41758974612254,2.89298117163023,0,0.54390568381871,4.42587845717133,3.58717770196152,8.99083303931635,5.27452589664914,0.819674726883377,6.05930225290495,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,3.85585579706168,2.55492153374884,1.42452482933804,1.14020871547503,1.97964147567043,5.30980553359851,0.485561272309963,0.906970670894253,1.69744571780308,1.47650946440386,2.15204603560749,1.80899805217755,2.18120237686503,3.56497378384721,4.10847785316561,8.4334886859999,2.06271086496374,3.06395645178409,0.18006109403131,0.646793418913773,1.07168517515796,0.886701168211368,1.24858172321449,2.13913726782757,3.34911444026059,1.17335854031855,0.21183207086382,2.64634077665954,2.80306630000516,2.42196640043858,2.83470747162333,3.22305328808468,5.58079059133208,2.62332752966866,5.56275906031529,0.341741761595705,1.03193433981611,0.740778109478847,1.31857919903284,0.546776910884101,0.457556346413045,1.01987057996313,0.559805809294632,1.10559979043539,8.59203556213602,0.474503990371703,0.813277868507395,1.29606408986162,1.46361807210128,1.52853794622324,3.10187996685088,2.0663363931334,2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14430 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=A2AMS3,A2AMS2,Q03249 | |||
|association_with_transcript=0bp_to_ENSMUST00000084695,ENSMUST00000108038,ENSMUST00000135734,ENSMUST00000151490,NM_016658,uc008sjn.1,uc008sjo.1_5end | |||
|cluster_id=chr4:41702083..41702140,+ | |||
|description=CAGE_peak_5_at_Galt_5end | |||
|id=chr4:41702083..41702140,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.54e-08!51;UBERON:0002021!6.88e-08!10;UBERON:0000411!6.88e-08!10;UBERON:0001950!6.88e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.76e-09,51;UBERON:0002021,2.39e-08,10;UBERON:0000411,2.39e-08,10;UBERON:0001950,2.39e-08,10 | |||
|phase1_expression=3.68342348341026,0.697950815278722,1.81999695755814,1.51232105653415,1.00179145989269,1.17515490338323,0.934450562382103,0.258246646883153,0.140788722151667,0.468129052643987,0,0,0.171200729931206,0.262261207256992,0,0.404950534779652,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,4.25216450755349,0,0.261199789138935,2.3998863419011,1.83527424853736,0.57423196411502,1.7230479846363,0.646413698057667,1.33016393619462,2.01624103807945,1.99557459589774,0,0,0,2.02196133825892,2.65975432573588,2.6542016314108,0,0,0,0,0,0,2.26614272356039,2.43304634926835,1.10128051297009,0,0.218025156380447,0,0,0.139986421625363,0,0.167782606057736,1.45072428402269,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0,0.122490799214954,0,0,0,0,0.307213066512487,0,0.182975287204819,0,0.558365998002762,0,0.45839474333043,0,0,0,0,0,1.15945795480671,5.16254326188832,0,0.539703191637817,11.695975514058,5.82434953226536,6.74133216632409,1.36344258062446,1.55871602761721,0.70667914902068,2.25349471642689,0,2.54805239706646,0,0.649473123033642,0.506719730950197,0,3.31133251185274,0.258937883647172,2.52351636410202,1.56136794089522,1.21786191324856,3.68984795609694,2.71300752994721,3.05730638552832,3.14166478324189,0.247194967734374,6.65157041831594,1.76922110389975,2.26473589926373,1.54589062922275,1.45462575940567,5.59175283654366,12.5895742714965,9.84399522023239,2.04365644166873,0.359445373517761,0.599902730993408,0.127070227073065,9.13722900369418,3.66000482254901,1.00523481690292,11.8200537730748,13.0414883238469,7.68815764870372,6.65189178577806,2.44414473240759,2.11491850037158,1.0108910337347,5.6819301089348,0.130120442962704,1.60931473103431,0.720248519221397,1.20563854268572,1.15662048557257,1.2811372028485,0.843315521037559,2.58703370739016,0,0.378212160335639,1.23165786914764,1.53437012699302,2.78047249225598,2.089512999133,2.26360350048738,0.796137067273973,0,0.257347907114715,0.284163499395593,0.207125772535502,0.469052119962192,1.08037236876609,1.65721314909647,2.55793501271625,2.31400669331067,4.65067889500816,5.09719462659276,3.15266424391358,3.78487654801005,6.23836363500562,5.26947262048062,6.72519942156529,5.04965265169416,7.1129401942997,9.67333763394985,1.74937841044784,3.30418782983798,2.64450566663544,0.213288250535234,0.232236671860439,0.77320476793256,2.01683524623343,0.889512175379481,1.71203063501303,3.32170343081158,1.15289268306808,2.26201687920243,3.58121649674071,3.70431765526328,4.49409704327111,3.02593269824572,3.78368419183298,0.569003702859245,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,2.52488951605147,3.35153646758564,6.05201606716369,5.02395929092399,6.66344685177723,11.5616524563988,0.166845105716094,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,1.01850340712568,1.72617682470486,1.78348749452539,4.3929826110093,2.87536413054709,4.83783231969054,7.17686648163489,17.4279425783507,12.9166137735777,20.2626278972614,2.58654466233247,0.189491411770485,0.651859905768103,1.18821560042632,0.938760993154008,1.67506257441816,1.6663054862021,2.14647012643579,1.7339865851681,1.55025282754142,2.55127629851979,3.60499292374624,2.41758974612254,2.89298117163023,0,0.54390568381871,4.42587845717133,3.58717770196152,8.99083303931635,5.27452589664914,0.819674726883377,6.05930225290495,0.315508219416257,0,0,0,0,0,0.404810701674894,0,0,3.85585579706168,2.55492153374884,1.42452482933804,1.14020871547503,1.97964147567043,5.30980553359851,0.485561272309963,0.906970670894253,1.69744571780308,1.47650946440386,2.15204603560749,1.80899805217755,2.18120237686503,3.56497378384721,4.10847785316561,8.4334886859999,2.06271086496374,3.06395645178409,0.18006109403131,0.646793418913773,1.07168517515796,0.886701168211368,1.24858172321449,2.13913726782757,3.34911444026059,1.17335854031855,0.21183207086382,2.64634077665954,2.80306630000516,2.42196640043858,2.83470747162333,3.22305328808468,5.58079059133208,2.62332752966866,5.56275906031529,0.341741761595705,1.03193433981611,0.740778109478847,1.31857919903284,0.546776910884101,0.457556346413045,1.01987057996313,0.559805809294632,1.10559979043539,8.59203556213602,0.474503990371703,0.813277868507395,1.29606408986162,1.46361807210128,1.52853794622324,3.10187996685088,2.0663363931334,2.09404753587224,2.59229946583586,8.69875038321696,0,0.897099276263873,0.66183396182839,1.16670713006429,0.904118764344118,0.675824501963113,1.17357238645754,1.17183946359555,1.04859344425711,0.483168241652012,1.72818003754719,0.316011120628178,0.202725215290164,0.616265742988964,0.77952493786677,0.358053391334963,0.79472541912506,0.240390899039938,0.147689527174577,0.403865799792591,0.381034033274999,0.403304740547362,0.0974578807397524,0.481059208201647,0,4.0811469050738,0.221985953374065,0.179427713218951,0.335769232728157,2.12508553435409,1.87682475451182,1.46521299413812,1.71494703263253,4.51414893631827,11.8597886949584,11.9684561491866,20.0513429703789,10.99860366999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| |||
|short_description=p5@Galt | |||
}} |
Latest revision as of 23:40, 26 September 2015
Short description: | p5@Galt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Galt_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000084695, ENSMUST00000108038, ENSMUST00000135734, ENSMUST00000151490, NM_016658, uc008sjn.1, uc008sjo.1_5end |
EntrezGene: | Galt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.76e-09 | 51 |
occipital lobe | 2.39e-08 | 10 |
visual cortex | 2.39e-08 | 10 |
neocortex | 2.39e-08 | 10 |