FFCP PHASE1:Hg19::chr8:8142089..8142114,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:8142089..8142114,- | |||
|coexpression_cluster_id=C674 | |||
|description=CAGE_peak_at_chr8:8142089..8142114,- | |||
|id=chr8:8142089..8142114,- | |||
|ontology_enrichment_celltype=CL:0000945!2.32e-45!24;CL:0000826!2.32e-45!24;CL:0000236!7.94e-24!14;CL:0000542!8.77e-23!53;CL:0000051!8.77e-23!53;CL:0000838!3.20e-21!52;CL:0002087!2.63e-09!119;CL:0000738!3.55e-09!140;CL:0000064!1.51e-07!3;CL:0005012!1.51e-07!3;CL:0000067!1.51e-07!3;CL:0002304!1.51e-07!3;CL:0002605!1.73e-07!3;CL:0000988!3.42e-07!182;CL:0002031!3.99e-07!124;CL:0000080!5.28e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.00e-55;24!CL:0000236;5.67e-26;13!CL:0000542;8.77e-19;53!CL:0000453;2.98e-13;5!CL:0000946;2.05e-08;1!CL:0000786;2.05e-08;1!CL:0000990;1.39e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.42e-55,24;CL:0000826,2.42e-55,24;CL:0000542,2.83e-31,53;CL:0000051,2.83e-31,53;CL:0000236,3.33e-31,14;CL:0000838,6.74e-28,52;CL:0000988,2.23e-15,177;CL:0000738,4.23e-15,136;CL:0000453,2.86e-13,5;CL:0002087,1.24e-12,115;CL:0002032,3.28e-12,161;CL:0000837,3.28e-12,161;CL:0000037,1.49e-11,168;CL:0002031,2.28e-10,120;CL:0000946,1.84e-08,1;CL:0000786,1.84e-08,1;CL:0000980,1.84e-08,1;CL:0000990,1.36e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;8.77e-19;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.46e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:630;1.37e-08;1!DOID:0050177;1.37e-08;1!DOID:12603;1.37e-08;1!DOID:0050427;1.37e-08;1!DOID:0060060;2.05e-08;1!DOID:0060061;2.05e-08;1!DOID:8691;2.05e-08;1!DOID:4960;3.28e-08;1!DOID:0070004;3.28e-08;1!DOID:0060058;6.82e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.27e-08,1;DOID:0050177,1.27e-08,1;DOID:0050427,1.27e-08,1;DOID:12603,1.59e-08,1;DOID:0060060,1.71e-08,1;DOID:0060061,1.71e-08,1;DOID:8691,1.71e-08,1;DOID:4960,2.64e-08,1;DOID:0070004,2.64e-08,1;DOID:0060058,6.48e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.12e-09!15;UBERON:0000179!2.12e-09!15;UBERON:0000463!2.12e-09!15;UBERON:0002106!3.43e-08!3;UBERON:0004854!3.43e-08!3;UBERON:0009034!3.43e-08!3;UBERON:0002095!3.43e-08!3;UBERON:0004782!3.43e-08!3;UBERON:0003281!3.43e-08!3;UBERON:0009664!3.43e-08!3;UBERON:0002296!3.43e-08!3;UBERON:0005602!3.43e-08!3;UBERON:0001179!3.43e-08!3;UBERON:0006293!3.43e-08!3;UBERON:0001778!1.51e-07!3;UBERON:0001775!1.51e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.27e-10;3!UBERON:0002390;3.28e-07;32!UBERON:0002331;3.50e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.97e-10,3;UBERON:0004854,1.97e-10,3;UBERON:0009034,1.97e-10,3;UBERON:0002095,1.97e-10,3;UBERON:0004782,1.97e-10,3;UBERON:0003281,1.97e-10,3;UBERON:0009664,1.97e-10,3;UBERON:0002296,1.97e-10,3;UBERON:0005602,1.97e-10,3;UBERON:0001179,1.97e-10,3;UBERON:0006293,1.97e-10,3;UBERON:0002331,3.54e-07,10;UBERON:0000358,3.54e-07,10;UBERON:0000307,3.54e-07,10;UBERON:0000091,3.54e-07,10;UBERON:0000087,3.54e-07,10;UBERON:0007010,3.54e-07,10;UBERON:0007806,3.54e-07,10;UBERON:0008780,3.54e-07,10;UBERON:0005728,3.54e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.502170558379211,7.10644673455947,6.73224833489555,8.02849969399528,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,5.27988733383968,2.73069305631066,7.11607403090844,1.28019066769952,2.00197993518006,2.87376219977242,0.661044872784862,2.86216126360609,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.886917589850256,0.351339142772504,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.714695326373367,0.822724546172388,0.648473311192717,0,0,0,0,0,5.01668572839441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0817183751411,6.91958058100416,5.11667552576731,0,0,0,0.547364367646998,0,10.9251170790342,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,50.2002316307562,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.988058159489721,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,1.46151324344699,6.37905037597792,7.53502652346749,0,0,2.99981093782395,0,1.89436477626897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,1.41696576325585,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,2.88084968889448,0.171488009437418,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.59772660565751,0.257831551894309,5.99646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,5.77023286145819 | |||
|short_description=p@chr8:8142089..8142114,- | |||
}} |
Latest revision as of 20:05, 31 July 2015
Short description: | p@chr8:8142089..8142114, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:8142089..8142114, - |
Coexpression cluster: | C674_endometrial_cord_ductal_synovial_adrenal_B_mixed |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.42e-55 | 24 |
pro-B cell | 2.42e-55 | 24 |
lymphocyte | 2.83e-31 | 53 |
common lymphoid progenitor | 2.83e-31 | 53 |
B cell | 3.33e-31 | 14 |
lymphoid lineage restricted progenitor cell | 6.74e-28 | 52 |
hematopoietic cell | 2.23e-15 | 177 |
leukocyte | 4.23e-15 | 136 |
Langerhans cell | 2.86e-13 | 5 |
nongranular leukocyte | 1.24e-12 | 115 |
hematopoietic oligopotent progenitor cell | 3.28e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.28e-12 | 161 |
hematopoietic stem cell | 1.49e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 2.28e-10 | 120 |
antibody secreting cell | 1.84e-08 | 1 |
plasma cell | 1.84e-08 | 1 |
plasmablast | 1.84e-08 | 1 |
conventional dendritic cell | 1.36e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.97e-10 | 3 |
gastrointestinal system mesentery | 1.97e-10 | 3 |
stomach region | 1.97e-10 | 3 |
mesentery | 1.97e-10 | 3 |
gastrointestinal system serosa | 1.97e-10 | 3 |
mesentery of stomach | 1.97e-10 | 3 |
gut mesentery | 1.97e-10 | 3 |
dorsal mesentery | 1.97e-10 | 3 |
dorsal mesogastrium | 1.97e-10 | 3 |
peritoneal cavity | 1.97e-10 | 3 |
spleen primordium | 1.97e-10 | 3 |
umbilical cord | 3.54e-07 | 10 |
blastocyst | 3.54e-07 | 10 |
blastula | 3.54e-07 | 10 |
bilaminar disc | 3.54e-07 | 10 |
inner cell mass | 3.54e-07 | 10 |
cleaving embryo | 3.54e-07 | 10 |
connecting stalk | 3.54e-07 | 10 |
inner cell mass derived epiblast | 3.54e-07 | 10 |
extraembryonic mesoderm | 3.54e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.27e-08 | 1 |
monogenic disease | 1.27e-08 | 1 |
xeroderma pigmentosum | 1.27e-08 | 1 |
acute leukemia | 1.59e-08 | 1 |
non-Hodgkin lymphoma | 1.71e-08 | 1 |
cutaneous T cell lymphoma | 1.71e-08 | 1 |
mycosis fungoides | 1.71e-08 | 1 |
bone marrow cancer | 2.64e-08 | 1 |
myeloma | 2.64e-08 | 1 |
lymphoma | 6.48e-07 | 10 |