FFCP PHASE1:Hg19::chr8:90769563..90769576,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000523859_5end | |||
|cluster_id=chr8:90769563..90769576,- | |||
|coexpression_cluster_id=C514 | |||
|description=CAGE_peak_1_at_ENST00000523859_5end | |||
|id=chr8:90769563..90769576,- | |||
|ontology_enrichment_celltype=CL:0000359!3.13e-08!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.22e-10;32!CL:0002144;1.49e-09;3!CL:0002595;2.88e-09;5!CL:0002138;3.80e-08;6!CL:0002139;5.54e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.03e-11,32;CL:0002144,1.43e-09,3;CL:0002595,2.86e-09,5;CL:0005020,2.67e-08,6;CL:0002138,2.67e-08,6;CL:0005022,2.67e-08,6;CL:0002139,3.48e-08,24;CL:0000192,9.79e-08,43;CL:0000514,9.79e-08,43;CL:0000393,1.45e-07,61;CL:0000211,1.45e-07,61;CL:0000222,5.67e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;3.80e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.44e-11!69;UBERON:0002049!3.11e-10!79;UBERON:0007798!3.11e-10!79;UBERON:0004573!1.79e-09!33;UBERON:0004571!1.79e-09!33;UBERON:0001981!4.32e-09!60;UBERON:0007500!4.32e-09!60;UBERON:0004537!4.32e-09!60;UBERON:0006965!4.32e-09!60;UBERON:0001637!5.43e-09!42;UBERON:0003509!5.43e-09!42;UBERON:0004572!5.43e-09!42;UBERON:0004872!1.82e-08!84;UBERON:0004535!4.74e-08!110;UBERON:0001009!1.08e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.66e-11;33!UBERON:0004571;5.66e-11;33!UBERON:0010523;1.49e-09;3!UBERON:0001915;1.49e-09;3!UBERON:0001982;1.49e-09;3!UBERON:0003834;2.88e-09;5!UBERON:0001533;2.88e-09;5!UBERON:0000055;1.87e-08;65!UBERON:0001637;9.19e-08;42!UBERON:0003509;9.19e-08;42!UBERON:0004572;9.19e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.28e-15,68;UBERON:0004573,7.08e-13,33;UBERON:0004571,7.08e-13,33;UBERON:0002049,7.89e-13,78;UBERON:0007798,7.89e-13,78;UBERON:0007500,5.96e-12,59;UBERON:0001981,5.96e-12,59;UBERON:0004537,5.96e-12,59;UBERON:0006965,5.96e-12,59;UBERON:0004535,3.49e-11,109;UBERON:0004872,3.82e-11,83;UBERON:0001009,1.06e-10,112;UBERON:0010523,1.43e-09,3;UBERON:0001915,1.43e-09,3;UBERON:0001982,1.43e-09,3;UBERON:0001637,2.13e-09,42;UBERON:0003509,2.13e-09,42;UBERON:0004572,2.13e-09,42;UBERON:0003834,2.86e-09,5;UBERON:0001533,2.86e-09,5;UBERON:0003914,5.05e-08,117;UBERON:0003081,6.33e-07,203 | |||
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| |||
|short_description=p1@ENST00000523859 | |||
}} |
Latest revision as of 20:24, 31 July 2015
Short description: | p1@ENST00000523859 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000523859_5end |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | 15bp_to_ENST00000523859_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.03e-11 | 32 |
capillary endothelial cell | 1.43e-09 | 3 |
smooth muscle cell of the subclavian artery | 2.86e-09 | 5 |
lymphangioblast | 2.67e-08 | 6 |
endothelial cell of lymphatic vessel | 2.67e-08 | 6 |
vascular lymphangioblast | 2.67e-08 | 6 |
endothelial cell of vascular tree | 3.48e-08 | 24 |
smooth muscle cell | 9.79e-08 | 43 |
smooth muscle myoblast | 9.79e-08 | 43 |
electrically responsive cell | 1.45e-07 | 61 |
electrically active cell | 1.45e-07 | 61 |
mesodermal cell | 5.67e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.28e-15 | 68 |
systemic artery | 7.08e-13 | 33 |
systemic arterial system | 7.08e-13 | 33 |
vasculature | 7.89e-13 | 78 |
vascular system | 7.89e-13 | 78 |
epithelial tube open at both ends | 5.96e-12 | 59 |
blood vessel | 5.96e-12 | 59 |
blood vasculature | 5.96e-12 | 59 |
vascular cord | 5.96e-12 | 59 |
cardiovascular system | 3.49e-11 | 109 |
splanchnic layer of lateral plate mesoderm | 3.82e-11 | 83 |
circulatory system | 1.06e-10 | 112 |
microcirculatory vessel | 1.43e-09 | 3 |
endothelium of capillary | 1.43e-09 | 3 |
capillary | 1.43e-09 | 3 |
artery | 2.13e-09 | 42 |
arterial blood vessel | 2.13e-09 | 42 |
arterial system | 2.13e-09 | 42 |
thoracic segment blood vessel | 2.86e-09 | 5 |
subclavian artery | 2.86e-09 | 5 |
epithelial tube | 5.05e-08 | 117 |
lateral plate mesoderm | 6.33e-07 | 203 |