FFCP PHASE1:Mm9::chr5:143579562..143579565,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:143579562..143579565,+|id=chr5:143579562..143579565,+|ontology_enrichment_celltype=CL:0002563!2.93e-07!9;CL:0002251!2.93e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.14e-08,9;CL:0002251,3.14e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.93e-09!15;UBERON:0001242!1.75e-08!13;UBERON:0000060!1.75e-08!13;UBERON:0001262!1.75e-08!13;UBERON:0004786!1.75e-08!13;UBERON:0003350!2.93e-07!9;UBERON:0004808!2.93e-07!9;UBERON:0001277!2.93e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.90e-11,15;UBERON:0001242,1.17e-09,13;UBERON:0001262,1.17e-09,13;UBERON:0004786,1.17e-09,13;UBERON:0000160,1.28e-08,31;UBERON:0003350,3.14e-08,9;UBERON:0004808,3.14e-08,9;UBERON:0001277,3.14e-08,9;UBERON:0000485,5.33e-07,11|phase1_expression=0.640595388419176,26.5221309805914,19.5649672937501,37.8080264133538,56.1003217539909,12.0873075776561,8.64366770203445,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0.946386496074713,0.274228867211478,0.84877930359606,1.7008658030214,0.893618560807968,1.56719873483361,2.71987118748791,5.04700418347774,11.4846392823004,8.61523992318149,7.54149314400612,1.52018735565099,2.52030129759931,2.66076612786366,0,0,0,12.4206196493048,2.99222361645286,13.4751775133164,2.09265815368454,0.7813353445238,2.09409497589519,5.29408339227913,8.19654581950135,3.88408282424923,1.25896817975577,1.72340783073175,0.550640256485045,0,1.09012578190223,0,0.388859798148567,0.419959264876088,0,0.838913030288682,0,0,0.257259436035947,0.85960031981627,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.768436610643109,1.03689612308478,1.08004750665353,0.630974884054146,0.571301968807607,0,0.61245399607477,1.43768206527355,0,0,1.78762273319263,0.921639199537461,0.791317726381163,0.914876436024097,0,1.3959149950069,1.68828783009504,1.06958773443767,0.294628585473668,0.427115042397309,1.1183966749518,0.530083353332288,0.68014404096107,27.2472619379577,1.72084775396277,0.679971333707751,0.539703191637817,1.94932925234301,0.896053774194671,1.12355536105401,1.36344258062446,1.29893002301434,0.70667914902068,1.54927761754349,0,2.54805239706646,0,0.432982082022428,0,1.51657333504435,1.02765491747154,0.258937883647172,2.9688427812965,0.520455980298408,1.21786191324856,1.38369298353635,1.65794904607885,1.05829836422134,3.01599819191221,0.988779870937496,1.15679485535929,0,0.970601099684455,1.32504911076236,2.90925151881133,5.59175283654366,6.73395833126558,5.02672096352292,2.81002760729451,0.718890747035522,1.19980546198682,0.508280908292259,2.09706895166752,0.915001205637253,2.76439574648302,0.869121600961382,0.511430914660661,2.70124457927428,1.94689515681309,0.407357455401265,1.61729061793121,0.758168275301024,1.68353484709179,1.04096354370163,1.83921683546778,0.900310649026746,1.35634336052144,1.36072998302656,1.40925092313335,0.843315521037559,2.32833033665114,1.07783996466421,0.378212160335639,0.703804496655795,0.219195732427575,0.278047249225598,1.39300866608867,0.823128545631774,1.39323986772945,0.702213187313235,1.02939162845886,0.852490498186778,0.414251545071004,0.703578179943289,0.900310307305074,0.23674473558521,0.196764231747404,0.617068451549513,1.62773761325285,0.804820204198858,0.817357396570186,0.329119699826961,0.32833492815819,0.972825714550269,2.63159977365598,1.75640092232841,1.61047702512446,2.52347938276953,1.3377599609307,7.93005079161115,5.02456076660734,1.06644125267617,0.696710015581316,0.644337306610467,0.80673409849337,1.33426826306922,1.14135375667535,3.79623249235609,0.988193728344065,0,0.994782360205754,1.16978452271472,3.59527763461689,4.97117514711797,4.58024928485045,0.569003702859245,0.228497025219458,2.25415471346161,0.610953983535943,0.193952487167626,0.210407459670956,0.505892296994058,1.32849133181642,1.255989822731,1.60416313098341,4.74324203339438,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,2.03700681425136,1.72617682470486,0.648540907100142,0.823684239564244,4.31304619582064,1.86070473834252,4.05648975048929,2.02063102357689,2.15276896226295,4.3419916922703,2.58654466233247,0.757965647081939,0.325929952884052,0.678980343100753,1.87752198630802,3.85264392116176,6.9032655856944,1.95133647857799,1.89162172927429,0.8858587585951,1.2756381492599,3.4411296090305,4.83517949224508,4.62876987460837,4.52373851817817,1.08781136763742,0.983528546038072,1.10374698521893,0.963303539926752,2.69586879162067,0.327869890753351,1.51482556322624,0.315508219416257,0.780877488593277,0.861693590931196,1.43381278771531,1.55959071857676,0.849229592366497,1.21443210502468,2.04579100537918,0.790575555893047,6.10510501201433,4.5420827266646,0.35613120733451,0.325773918707152,1.97964147567043,0,1.21390318077491,2.41858845571801,0.565815239267694,2.06711325016541,0.307435147943927,0.258428293168221,0.363533729477506,0,1.58018378967908,0,0,9.87274856685985,1.8006109403131,1.16422815404479,1.28602221018955,1.24138163549592,1.96205699362278,1.48094118541909,3.04464949114599,0.704015124191131,1.90648863777438,0.882113592219848,3.79238381765404,0,0.663442174209714,0.596861720015682,1.31312719796049,3.20628920292836,1.11255181206306,0,1.23832120777933,1.48155621895769,0.941842285023455,0.410082683163076,0.457556346413045,1.18984900995699,0.839708713941948,0.690999869022119,1.90934123603023,0.474503990371703,0.813277868507395,0.972048067396211,0.836353184057875,1.9652630737156,1.34864346384821,0.661227645802687,2.09404753587224,3.36998930558661,4.97071450469541,0,0.897099276263873,0.992750942742586,0.388902376688095,1.80823752868824,2.70329800785245,1.40828686374905,2.604087696879,1.99232754408851,0.483168241652012,0.864090018773596,0.632022241256357,0.608175645870493,1.1298205288131,0.25984164595559,1.43221356533985,0.79472541912506,0.240390899039938,0.295379054349154,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0.467507608726276,2.94749498699775,0,0.179427713218951,0.335769232728157,1.54551675225752,1.12609485270709,1.83151624267265,2.57242054894879,2.00628841614145,0.564751842617067,0,1.14579102687879,0.859265911718438,0.685082519770642,3.0215755895588,0,1.35096360967266,0,1.55328093525546,0.93408612825759,0.798049746802062,0.512200817262403,0.729320151204882,0.419226325255965,1.2869045591501,1.11123363900808,1.23621034343337,0.64183841918363,0.758091635291392,1.77435509923168,1.32038438970253,0.561849044819294,0.448176066834085,1.32101578597911,1.42888107384922,1.15884325944855,0.964546102318525,1.23625770240992,0.883193520806384,0.685738504770831,0.70990322463735,0.715308569841963,0.436039249896986,0.941093804153306,0.676916863133412,0.73171189149109,0.526139422875686,0.679020569229309,1.12228454331548,1.18635018124174,0.689531376628944,0,0.77468420592983,1.35034627686799,1.74867404556562,2.33931608445408,0.644613162144895,0.191288332068843,0.661774257358546,0.463735671240843|short_description=p@chr5:143579562..143579565,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:143579562..143579565,+ | |||
|description=CAGE_peak_at_chr5:143579562..143579565,+ | |||
|id=chr5:143579562..143579565,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.93e-07!9;CL:0002251!2.93e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.14e-08,9;CL:0002251,3.14e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.93e-09!15;UBERON:0001242!1.75e-08!13;UBERON:0000060!1.75e-08!13;UBERON:0001262!1.75e-08!13;UBERON:0004786!1.75e-08!13;UBERON:0003350!2.93e-07!9;UBERON:0004808!2.93e-07!9;UBERON:0001277!2.93e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.90e-11,15;UBERON:0001242,1.17e-09,13;UBERON:0001262,1.17e-09,13;UBERON:0004786,1.17e-09,13;UBERON:0000160,1.28e-08,31;UBERON:0003350,3.14e-08,9;UBERON:0004808,3.14e-08,9;UBERON:0001277,3.14e-08,9;UBERON:0000485,5.33e-07,11 | |||
|phase1_expression=0.640595388419176,26.5221309805914,19.5649672937501,37.8080264133538,56.1003217539909,12.0873075776561,8.64366770203445,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0.946386496074713,0.274228867211478,0.84877930359606,1.7008658030214,0.893618560807968,1.56719873483361,2.71987118748791,5.04700418347774,11.4846392823004,8.61523992318149,7.54149314400612,1.52018735565099,2.52030129759931,2.66076612786366,0,0,0,12.4206196493048,2.99222361645286,13.4751775133164,2.09265815368454,0.7813353445238,2.09409497589519,5.29408339227913,8.19654581950135,3.88408282424923,1.25896817975577,1.72340783073175,0.550640256485045,0,1.09012578190223,0,0.388859798148567,0.419959264876088,0,0.838913030288682,0,0,0.257259436035947,0.85960031981627,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0.299600110518405,0.768436610643109,1.03689612308478,1.08004750665353,0.630974884054146,0.571301968807607,0,0.61245399607477,1.43768206527355,0,0,1.78762273319263,0.921639199537461,0.791317726381163,0.914876436024097,0,1.3959149950069,1.68828783009504,1.06958773443767,0.294628585473668,0.427115042397309,1.1183966749518,0.530083353332288,0.68014404096107,27.2472619379577,1.72084775396277,0.679971333707751,0.539703191637817,1.94932925234301,0.896053774194671,1.12355536105401,1.36344258062446,1.29893002301434,0.70667914902068,1.54927761754349,0,2.54805239706646,0,0.432982082022428,0,1.51657333504435,1.02765491747154,0.258937883647172,2.9688427812965,0.520455980298408,1.21786191324856,1.38369298353635,1.65794904607885,1.05829836422134,3.01599819191221,0.988779870937496,1.15679485535929,0,0.970601099684455,1.32504911076236,2.90925151881133,5.59175283654366,6.73395833126558,5.02672096352292,2.81002760729451,0.718890747035522,1.19980546198682,0.508280908292259,2.09706895166752,0.915001205637253,2.76439574648302,0.869121600961382,0.511430914660661,2.70124457927428,1.94689515681309,0.407357455401265,1.61729061793121,0.758168275301024,1.68353484709179,1.04096354370163,1.83921683546778,0.900310649026746,1.35634336052144,1.36072998302656,1.40925092313335,0.843315521037559,2.32833033665114,1.07783996466421,0.378212160335639,0.703804496655795,0.219195732427575,0.278047249225598,1.39300866608867,0.823128545631774,1.39323986772945,0.702213187313235,1.02939162845886,0.852490498186778,0.414251545071004,0.703578179943289,0.900310307305074,0.23674473558521,0.196764231747404,0.617068451549513,1.62773761325285,0.804820204198858,0.817357396570186,0.329119699826961,0.32833492815819,0.972825714550269,2.63159977365598,1.75640092232841,1.61047702512446,2.52347938276953,1.3377599609307,7.93005079161115,5.02456076660734,1.06644125267617,0.696710015581316,0.644337306610467,0.80673409849337,1.33426826306922,1.14135375667535,3.79623249235609,0.988193728344065,0,0.994782360205754,1.16978452271472,3.59527763461689,4.97117514711797,4.58024928485045,0.569003702859245,0.228497025219458,2.25415471346161,0.610953983535943,0.193952487167626,0.210407459670956,0.505892296994058,1.32849133181642,1.255989822731,1.60416313098341,4.74324203339438,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,2.03700681425136,1.72617682470486,0.648540907100142,0.823684239564244,4.31304619582064,1.86070473834252,4.05648975048929,2.02063102357689,2.15276896226295,4.3419916922703,2.58654466233247,0.757965647081939,0.325929952884052,0.678980343100753,1.87752198630802,3.85264392116176,6.9032655856944,1.95133647857799,1.89162172927429,0.8858587585951,1.2756381492599,3.4411296090305,4.83517949224508,4.62876987460837,4.52373851817817,1.08781136763742,0.983528546038072,1.10374698521893,0.963303539926752,2.69586879162067,0.327869890753351,1.51482556322624,0.315508219416257,0.780877488593277,0.861693590931196,1.43381278771531,1.55959071857676,0.849229592366497,1.21443210502468,2.04579100537918,0.790575555893047,6.10510501201433,4.5420827266646,0.35613120733451,0.325773918707152,1.97964147567043,0,1.21390318077491,2.41858845571801,0.565815239267694,2.06711325016541,0.307435147943927,0.258428293168221,0.363533729477506,0,1.58018378967908,0,0,9.87274856685985,1.8006109403131,1.16422815404479,1.28602221018955,1.24138163549592,1.96205699362278,1.48094118541909,3.04464949114599,0.704015124191131,1.90648863777438,0.882113592219848,3.79238381765404,0,0.663442174209714,0.596861720015682,1.31312719796049,3.20628920292836,1.11255181206306,0,1.23832120777933,1.48155621895769,0.941842285023455,0.410082683163076,0.457556346413045,1.18984900995699,0.839708713941948,0.690999869022119,1.90934123603023,0.474503990371703,0.813277868507395,0.972048067396211,0.836353184057875,1.9652630737156,1.34864346384821,0.661227645802687,2.09404753587224,3.36998930558661,4.97071450469541,0,0.897099276263873,0.992750942742586,0.388902376688095,1.80823752868824,2.70329800785245,1.40828686374905,2.604087696879,1.99232754408851,0.483168241652012,0.864090018773596,0.632022241256357,0.608175645870493,1.1298205288131,0.25984164595559,1.43221356533985,0.79472541912506,0.240390899039938,0.295379054349154,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.0962118416403295,0.467507608726276,2.94749498699775,0,0.179427713218951,0.335769232728157,1.54551675225752,1.12609485270709,1.83151624267265,2.57242054894879,2.00628841614145,0.564751842617067,0,1.14579102687879,0.859265911718438,0.685082519770642,3.0215755895588,0,1.35096360967266,0,1.55328093525546,0.93408612825759,0.798049746802062,0.512200817262403,0.729320151204882,0.419226325255965,1.2869045591501,1.11123363900808,1.23621034343337,0.64183841918363,0.758091635291392,1.77435509923168,1.32038438970253,0.561849044819294,0.448176066834085,1.32101578597911,1.42888107384922,1.15884325944855,0.964546102318525,1.23625770240992,0.883193520806384,0.685738504770831,0.70990322463735,0.715308569841963,0.436039249896986,0.941093804153306,0.676916863133412,0.73171189149109,0.526139422875686,0.679020569229309,1.12228454331548,1.18635018124174,0.689531376628944,0,0.77468420592983,1.35034627686799,1.74867404556562,2.33931608445408,0.644613162144895,0.191288332068843,0.661774257358546,0.463735671240843 | |||
|short_description=p@chr5:143579562..143579565,+ | |||
}} |
Latest revision as of 00:06, 4 August 2015
Short description: | p@chr5:143579562..143579565, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:143579562..143579565, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.14e-08 | 9 |
epithelial cell of alimentary canal | 3.14e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.90e-11 | 15 |
intestinal mucosa | 1.17e-09 | 13 |
wall of intestine | 1.17e-09 | 13 |
gastrointestinal system mucosa | 1.17e-09 | 13 |
intestine | 1.28e-08 | 31 |
epithelium of mucosa | 3.14e-08 | 9 |
gastrointestinal system epithelium | 3.14e-08 | 9 |
intestinal epithelium | 3.14e-08 | 9 |
simple columnar epithelium | 5.33e-07 | 11 |