FFCP PHASE1:Hg19::chr9:127054324..127054331,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10783 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |||
|TSSclassifier=strong | |||
|UniProt=Q5TBH2 | |||
|association_with_transcript=66bp_to_ENST00000422297_5end | |||
|cluster_id=chr9:127054324..127054331,+ | |||
|description=CAGE_peak_22_at_NEK6_5end | |||
|id=chr9:127054324..127054331,+ | |||
|ontology_enrichment_celltype=CL:0002032!8.27e-23!165;CL:0000837!8.27e-23!165;CL:0000988!7.90e-22!182;CL:0000037!1.24e-21!172;CL:0000566!1.24e-21!172;CL:0000945!3.33e-17!24;CL:0000826!3.33e-17!24;CL:0000738!2.10e-16!140;CL:0002031!1.05e-15!124;CL:0000763!4.01e-14!112;CL:0000049!4.01e-14!112;CL:0002087!8.24e-12!119;CL:0000453!4.76e-10!5;CL:0000990!2.00e-09!8;CL:0000838!8.73e-09!52;CL:0000542!1.39e-08!53;CL:0000051!1.39e-08!53;CL:0002320!1.59e-08!365;CL:0000134!5.68e-08!358;CL:0000557!6.16e-08!71;CL:0000451!9.95e-08!10;CL:0000946!4.09e-07!1;CL:0000786!4.09e-07!1;CL:0000980!4.09e-07!1;CL:0000219!9.92e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000946;4.27e-34;1!CL:0000786;4.27e-34;1!CL:0000945;1.63e-22;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.84e-34,1;CL:0000786,1.84e-34,1;CL:0000980,1.84e-34,1;CL:0000945,1.63e-22,24;CL:0000826,1.63e-22,24;CL:0000785,5.48e-18,2;CL:0000955,5.48e-18,2;CL:0000818,5.48e-18,2;CL:0000954,5.48e-18,2;CL:0000816,5.48e-18,2;CL:0000817,1.85e-12,3;CL:0000838,9.83e-11,52;CL:0000542,1.53e-10,53;CL:0000051,1.53e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000954;8.34e-18;2 | |||
|ontology_enrichment_disease=DOID:74!3.58e-11!2;DOID:2531!3.72e-07!51;DOID:0060083!3.72e-07!51;DOID:0060060!9.48e-07!1;DOID:0060061!9.48e-07!1;DOID:8691!9.48e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.00e-08!375;UBERON:0002371!8.24e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.45e-12;3!UBERON:0004177;6.33e-08;5!UBERON:0005057;6.33e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.59e-12,3;UBERON:0004854,2.59e-12,3;UBERON:0009034,2.59e-12,3;UBERON:0002095,2.59e-12,3;UBERON:0004782,2.59e-12,3;UBERON:0003281,2.59e-12,3;UBERON:0009664,2.59e-12,3;UBERON:0002296,2.59e-12,3;UBERON:0005602,2.59e-12,3;UBERON:0001179,2.59e-12,3;UBERON:0006293,2.59e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.14940825229924,0.629686250509434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53204296105893,0.635020748171649,0.324621940274555,0,0.456469358066384,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29923502702408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p22@NEK6 | |||
}} |
Latest revision as of 00:19, 25 September 2015
Short description: | p22@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_NEK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 66bp_to_ENST00000422297_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q5TBH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.84e-34 | 1 |
plasma cell | 1.84e-34 | 1 |
plasmablast | 1.84e-34 | 1 |
lymphocyte of B lineage | 1.63e-22 | 24 |
pro-B cell | 1.63e-22 | 24 |
mature B cell | 5.48e-18 | 2 |
pre-B-II cell | 5.48e-18 | 2 |
transitional stage B cell | 5.48e-18 | 2 |
small pre-B-II cell | 5.48e-18 | 2 |
immature B cell | 5.48e-18 | 2 |
precursor B cell | 1.85e-12 | 3 |
lymphoid lineage restricted progenitor cell | 9.83e-11 | 52 |
lymphocyte | 1.53e-10 | 53 |
common lymphoid progenitor | 1.53e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.59e-12 | 3 |
gastrointestinal system mesentery | 2.59e-12 | 3 |
stomach region | 2.59e-12 | 3 |
mesentery | 2.59e-12 | 3 |
gastrointestinal system serosa | 2.59e-12 | 3 |
mesentery of stomach | 2.59e-12 | 3 |
gut mesentery | 2.59e-12 | 3 |
dorsal mesentery | 2.59e-12 | 3 |
dorsal mesogastrium | 2.59e-12 | 3 |
peritoneal cavity | 2.59e-12 | 3 |
spleen primordium | 2.59e-12 | 3 |