FFCP PHASE1:Hg19::chr9:16871087..16871103,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54796 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30988 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-246bp_to_ENST00000486514_5end | |||
|cluster_id=chr9:16871087..16871103,- | |||
|description=CAGE_peak_20_at_BNC2_5end | |||
|id=chr9:16871087..16871103,- | |||
|ontology_enrichment_celltype=CL:0000055!5.75e-11!180;CL:0000710!1.09e-09!20;CL:0000188!3.49e-09!9;CL:0000148!3.92e-09!10;CL:0000541!3.92e-09!10;CL:0002322!6.26e-08!5;CL:0000075!3.12e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002549;2.45e-12;2!CL:0000148;8.83e-10;10!CL:0002504;1.17e-08;3!CL:1000279;1.17e-08;3!CL:0002564;1.17e-08;3!CL:1000280;1.17e-08;3!CL:0000147;3.04e-07;14!CL:0000149;8.37e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,2.90e-12,2;CL:0000148,7.40e-10,10;CL:0000541,7.40e-10,10;CL:0002504,1.04e-08,3;CL:1000279,1.04e-08,3;CL:1000280,1.04e-08,3;CL:0002564,1.51e-08,3;CL:0000147,2.68e-07,14;CL:0000149,6.87e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;2.45e-12;2!DOID:4236;2.45e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,2.59e-12,2;DOID:4236,2.59e-12,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.45e-12;2!UBERON:0005358;2.45e-12;2!UBERON:0001886;2.45e-12;2!UBERON:0004086;2.45e-12;2!UBERON:0005282;2.45e-12;2!UBERON:0005281;2.45e-12;2!UBERON:0002242;1.17e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,2.90e-12,2;UBERON:0005358,2.90e-12,2;UBERON:0001886,2.90e-12,2;UBERON:0004086,2.90e-12,2;UBERON:0005282,2.90e-12,2;UBERON:0005281,2.90e-12,2;UBERON:0002242,1.51e-08,3;UBERON:0003068,1.51e-08,3;UBERON:0002328,1.51e-08,3;UBERON:0004880,1.51e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.626909442956176,0,0.136874425072884,0,0.229240217243854,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.283604451492204,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0,0,1.15235184896,0.234321431833797,0,0,0,0,0,0,0.408308342509787,0,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0.487894824518382,0.795178609928912,0.69716365721711,0.310983165046111,0.252320850875628,1.09493207722749,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0.144119953416961,0.12624243342638,0.317489471460845,0.381988425558278,0,0,0.616964956219941,1.8020583470635,1.42913216315289,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0.591092280605782,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0.154048617114644,0.614014698904518,0.137836572484531,0.537101224341368,0.290033387828457,0.767039646744908,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,1.64722217841633,0.589062011728432,0,0,0,0.48763373908959,0,0,0,0.565621727814851,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,4.22250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38899995946634,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0.482259445395058,0.825236619583403,1.66176135211674,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0.681552087141687,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0.159296767163702,0,0,0,0,0.521745061811734,0.300515217994437,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.437119121007915,0,0.245148321753905,0,0,0.297046400327086,0,0.169927114687817,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0,0,0,0.218531143927391,0,0,0,0,0,0.227336094654718,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0,0,0,0.342233301085281,0.0673520530145875,0,0.332660356546013,0.0814032686109745,0.106727345877715,0,0,0,0.122241444182866,0.813792356631477,0,0.402547587182052,0 | |||
|short_description=p20@BNC2 | |||
}} |
Latest revision as of 20:14, 16 September 2015
Short description: | p20@BNC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_BNC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -246bp_to_ENST00000486514_5end |
EntrezGene: | BNC2 |
HGNC: | 30988 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 2.90e-12 | 2 |
melanocyte | 7.40e-10 | 10 |
melanoblast | 7.40e-10 | 10 |
enteric smooth muscle cell | 1.04e-08 | 3 |
smooth muscle cell of large intestine | 1.04e-08 | 3 |
smooth muscle cell of colon | 1.04e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 1.51e-08 | 3 |
pigment cell | 2.68e-07 | 14 |
visual pigment cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 2.90e-12 | 2 |
ventricle of nervous system | 2.90e-12 | 2 |
choroid plexus | 2.90e-12 | 2 |
brain ventricle | 2.90e-12 | 2 |
ventricular system of brain | 2.90e-12 | 2 |
ventricular system of central nervous system | 2.90e-12 | 2 |
nucleus pulposus | 1.51e-08 | 3 |
axial mesoderm | 1.51e-08 | 3 |
notochord | 1.51e-08 | 3 |
chordamesoderm | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.59e-12 | 2 |
carcinosarcoma | 2.59e-12 | 2 |