FFCP PHASE1:Hg19::chr9:5897549..5897564,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2315 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7124 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000490518_5end | |||
|cluster_id=chr9:5897549..5897564,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_4_at_MLANA_5end | |||
|id=chr9:5897549..5897564,+ | |||
|ontology_enrichment_celltype=CL:0000148!7.40e-81!10;CL:0000541!7.40e-81!10;CL:0000147!9.56e-58!14;CL:0002567!3.13e-50!3;CL:0000710!2.17e-40!20;CL:0000075!7.13e-30!27;CL:0002077!2.12e-24!33;CL:0000325!1.32e-20!39;CL:0000333!1.16e-18!41;CL:0002566!6.23e-18!1;CL:0000133!4.72e-13!59;CL:0000221!7.68e-11!71 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.06e-107;10!CL:0000147;1.54e-76;14!CL:0002567;5.26e-66;3!CL:0000710;1.18e-53;20!CL:0000075;8.59e-40;27!CL:0002077;7.78e-28;34!CL:0002566;2.93e-23;1!CL:0000149;7.70e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.07e-107,10;CL:0000541,5.07e-107,10;CL:0000147,1.54e-76,14;CL:0002567,4.71e-66,3;CL:0000710,1.18e-53,20;CL:0000075,8.60e-40,27;CL:0002077,1.26e-31,34;CL:0000333,5.08e-25,41;CL:0002566,3.28e-23,1;CL:0000133,1.23e-17,59;CL:0000221,1.58e-14,72;CL:0000149,7.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.27e-09;59!CL:0000221;4.16e-08;72 | |||
|ontology_enrichment_disease=DOID:1909!9.92e-34!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.72e-44;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.72e-44,2 | |||
|ontology_enrichment_uberon=UBERON:0000989!1.44e-17!1;UBERON:0008811!1.44e-17!1;UBERON:0006258!1.44e-17!1;UBERON:0005876!1.44e-17!1;UBERON:0004874!1.44e-17!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;9.36e-07;15!UBERON:0007376;9.36e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,9.36e-07,15;UBERON:0007376,9.36e-07,15;UBERON:0007383,9.36e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22242630022592,1.14596527667483,2.34434894420094,8.55362230113526,10.179921777629,5.70651809903443,12.862189468376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06154382279153,1.7127920012698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MLANA | |||
}} |
Latest revision as of 14:09, 17 September 2015
Short description: | p4@MLANA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MLANA_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000490518_5end |
EntrezGene: | MLANA |
HGNC: | 7124 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.07e-107 | 10 |
melanoblast | 5.07e-107 | 10 |
pigment cell | 1.54e-76 | 14 |
light melanocyte | 4.71e-66 | 3 |
neurecto-epithelial cell | 1.18e-53 | 20 |
columnar/cuboidal epithelial cell | 8.60e-40 | 27 |
ecto-epithelial cell | 1.26e-31 | 34 |
migratory neural crest cell | 5.08e-25 | 41 |
dark melanocyte | 3.28e-23 | 1 |
neurectodermal cell | 1.23e-17 | 59 |
ectodermal cell | 1.58e-14 | 72 |
visual pigment cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 9.36e-07 | 15 |
outer epithelium | 9.36e-07 | 15 |
enveloping layer of ectoderm | 9.36e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.72e-44 | 2 |