FFCP PHASE1:Mm9::chr7:106684022..106684101,+: Difference between revisions
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{{FFCP|EntrezGene=109689|HGNC=|MCL_coexpression_id=1|UniProt=Q8BWG8|association_with_transcript=26bp_to_NM_177231,NM_178220,uc009ilu.1,uc009ilv.1_5end|description=CAGE_peak_4_at_Arrb1_5end|id=chr7:106684022..106684101,+|ontology_enrichment_celltype=CL:0000117!6.08e-13!23;CL:0000337!6.08e-13!23;CL:0000540!1.59e-08!33;CL:0000047!1.59e-08!33;CL:0000031!1.59e-08!33;CL:0000404!1.59e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-13,23;CL:0000337,5.96e-13,23;CL:0000540,1.57e-08,33;CL:0000047,1.57e-08,33;CL:0000031,1.57e-08,33;CL:0000404,1.57e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!7.66e-17!34;UBERON:0001049!1.12e-16!52;UBERON:0005068!1.12e-16!52;UBERON:0006241!1.12e-16!52;UBERON:0007135!1.12e-16!52;UBERON:0000955!1.22e-15!50;UBERON:0006238!1.22e-15!50;UBERON:0002346!1.44e-15!71;UBERON:0003075!1.44e-15!71;UBERON:0007284!1.44e-15!71;UBERON:0000033!2.20e-15!63;UBERON:0002616!4.27e-15!49;UBERON:0001017!1.03e-14!73;UBERON:0005743!1.03e-14!73;UBERON:0002791!5.75e-14!29;UBERON:0003528!5.75e-14!29;UBERON:0001893!5.75e-14!29;UBERON:0000073!2.05e-13!75;UBERON:0001016!2.05e-13!75;UBERON:0003056!2.96e-13!49;UBERON:0003080!2.58e-12!40;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0004121!1.05e-11!102;UBERON:0000924!1.05e-11!102;UBERON:0006601!1.05e-11!102;UBERON:0000956!8.88e-10!21;UBERON:0001869!8.88e-10!21;UBERON:0000203!8.88e-10!21;UBERON:0002021!5.66e-08!10;UBERON:0000411!5.66e-08!10;UBERON:0001950!5.66e-08!10;UBERON:0002619!6.09e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.83e-18,54;UBERON:0002346,6.16e-17,64;UBERON:0003075,6.16e-17,64;UBERON:0007284,6.16e-17,64;UBERON:0002020,7.47e-17,34;UBERON:0001049,1.24e-16,52;UBERON:0005068,1.24e-16,52;UBERON:0006241,1.24e-16,52;UBERON:0007135,1.24e-16,52;UBERON:0001017,1.18e-14,73;UBERON:0003528,5.63e-14,29;UBERON:0002791,5.63e-14,29;UBERON:0001893,5.63e-14,29;UBERON:0000955,7.06e-14,47;UBERON:0006238,7.06e-14,47;UBERON:0010371,1.58e-13,73;UBERON:0002616,2.37e-13,46;UBERON:0001016,2.45e-13,75;UBERON:0003056,2.90e-13,49;UBERON:0003080,2.53e-12,40;UBERON:0004121,2.77e-12,95;UBERON:0000924,2.77e-12,95;UBERON:0006601,2.77e-12,95;UBERON:0002780,9.83e-12,39;UBERON:0001890,9.83e-12,39;UBERON:0006240,9.83e-12,39;UBERON:0000956,8.75e-10,21;UBERON:0001869,8.75e-10,21;UBERON:0000203,8.75e-10,21;UBERON:0002021,5.60e-08,10;UBERON:0000411,5.60e-08,10;UBERON:0001950,5.60e-08,10;UBERON:0002619,6.03e-08,17;UBERON:0010314,2.98e-07,92|phase1_expression=2.08193501236232,2.44282785347553,2.27499619694768,9.98131897312539,18.5331420080148,1.00727563147134,3.03696432774183,2.84071311571468,1.267098499365,1.17032263160997,0,0,3.42401459862411,2.62261207256992,3.33109761815663,4.25198061518635,1.39912375625629,2.36596624018678,4.2505474417779,1.69755860719212,8.41928572495591,1.68794617041505,2.08959831311148,1.59992422793407,1.37645568640302,0.57423196411502,1.7230479846363,1.50829862880122,3.23039813075836,3.52842181663903,0.443461021310609,8.89042942843484,8.61090702618398,0,1.73310971850765,1.49611180822643,2.45003227514843,5.4409111995798,7.0320181007142,5.23523743973798,8.2352408324342,15.7100461540443,13.1087795318411,1.6366586336825,0.912392380975631,0.734187008646726,4.69434806608824,0.872100625521786,1.75748946187577,1.36100929351998,0.699932108126813,1.43752564364972,1.67782606057736,2.17608642603403,3.02484419228218,2.05807548828758,1.14613375975503,2.57836046138721,29.5382032855013,29.0945038599618,34.2268957893337,1.0165335962074,0,7.64914759689189,4.94433181283487,6.3943210345149,2.69640099466564,1.15265491596466,9.22837549545451,12.5555522648472,9.67494822216357,27.7081454871689,28.2711732418065,9.30930074033651,10.2554653989513,22.0612508786405,37.4393995397922,25.2820929408672,30.26048705148,28.0917792865313,21.9570344645783,18.2319679694866,20.9387249251036,26.449842671489,25.6701056265041,34.4715445004191,27.4777343942269,22.1815340532108,0.681535739998656,1.73814588245607,4.92769630792852,2.58127163094416,0.679971333707751,0,0.649776417447669,0,2.66844398250329,0.852151612890289,1.03914401841148,2.12003744706204,2.81686839553361,1.28326477414318,10.1922095882658,7.11066703153331,0.649473123033642,0,0.505524445014783,2.62622923353838,3.36619248741323,5.04703272820404,2.4287945747259,2.74018930480927,3.92046345335299,2.71300752994721,4.9387256996996,1.88499886994513,3.70792451601561,2.31358971071859,7.07688441559899,2.42650274921114,3.09178125844551,0,3.72783522436244,19.3235326027621,15.0801628905688,5.62005521458901,2.87556298814209,1.19980546198682,1.52484272487678,40.5932632787069,42.5475560621323,22.3664746760899,53.8855392596057,48.0745059781021,29.298114282898,27.418773458451,2.95334155165917,2.61254638281195,1.26361379216837,5.6819301089348,2.21204753036596,2.98872735763515,4.68161537493908,5.57607825992146,8.09634339900802,9.22418786050918,9.55757590509234,5.95017752699736,2.80238390812695,3.9712276835242,4.04687585577082,4.3839146485515,4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109689 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BWG8 | |||
|association_with_transcript=26bp_to_NM_177231,NM_178220,uc009ilu.1,uc009ilv.1_5end | |||
|cluster_id=chr7:106684022..106684101,+ | |||
|description=CAGE_peak_4_at_Arrb1_5end | |||
|id=chr7:106684022..106684101,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.08e-13!23;CL:0000337!6.08e-13!23;CL:0000540!1.59e-08!33;CL:0000047!1.59e-08!33;CL:0000031!1.59e-08!33;CL:0000404!1.59e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-13,23;CL:0000337,5.96e-13,23;CL:0000540,1.57e-08,33;CL:0000047,1.57e-08,33;CL:0000031,1.57e-08,33;CL:0000404,1.57e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.66e-17!34;UBERON:0001049!1.12e-16!52;UBERON:0005068!1.12e-16!52;UBERON:0006241!1.12e-16!52;UBERON:0007135!1.12e-16!52;UBERON:0000955!1.22e-15!50;UBERON:0006238!1.22e-15!50;UBERON:0002346!1.44e-15!71;UBERON:0003075!1.44e-15!71;UBERON:0007284!1.44e-15!71;UBERON:0000033!2.20e-15!63;UBERON:0002616!4.27e-15!49;UBERON:0001017!1.03e-14!73;UBERON:0005743!1.03e-14!73;UBERON:0002791!5.75e-14!29;UBERON:0003528!5.75e-14!29;UBERON:0001893!5.75e-14!29;UBERON:0000073!2.05e-13!75;UBERON:0001016!2.05e-13!75;UBERON:0003056!2.96e-13!49;UBERON:0003080!2.58e-12!40;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0004121!1.05e-11!102;UBERON:0000924!1.05e-11!102;UBERON:0006601!1.05e-11!102;UBERON:0000956!8.88e-10!21;UBERON:0001869!8.88e-10!21;UBERON:0000203!8.88e-10!21;UBERON:0002021!5.66e-08!10;UBERON:0000411!5.66e-08!10;UBERON:0001950!5.66e-08!10;UBERON:0002619!6.09e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.83e-18,54;UBERON:0002346,6.16e-17,64;UBERON:0003075,6.16e-17,64;UBERON:0007284,6.16e-17,64;UBERON:0002020,7.47e-17,34;UBERON:0001049,1.24e-16,52;UBERON:0005068,1.24e-16,52;UBERON:0006241,1.24e-16,52;UBERON:0007135,1.24e-16,52;UBERON:0001017,1.18e-14,73;UBERON:0003528,5.63e-14,29;UBERON:0002791,5.63e-14,29;UBERON:0001893,5.63e-14,29;UBERON:0000955,7.06e-14,47;UBERON:0006238,7.06e-14,47;UBERON:0010371,1.58e-13,73;UBERON:0002616,2.37e-13,46;UBERON:0001016,2.45e-13,75;UBERON:0003056,2.90e-13,49;UBERON:0003080,2.53e-12,40;UBERON:0004121,2.77e-12,95;UBERON:0000924,2.77e-12,95;UBERON:0006601,2.77e-12,95;UBERON:0002780,9.83e-12,39;UBERON:0001890,9.83e-12,39;UBERON:0006240,9.83e-12,39;UBERON:0000956,8.75e-10,21;UBERON:0001869,8.75e-10,21;UBERON:0000203,8.75e-10,21;UBERON:0002021,5.60e-08,10;UBERON:0000411,5.60e-08,10;UBERON:0001950,5.60e-08,10;UBERON:0002619,6.03e-08,17;UBERON:0010314,2.98e-07,92 | |||
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| |||
|short_description=p4@Arrb1 | |||
}} |
Latest revision as of 14:17, 25 September 2015
Short description: | p4@Arrb1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Arrb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 26bp_to_NM_177231, NM_178220, uc009ilu.1, uc009ilv.1_5end |
EntrezGene: | Arrb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data