FFCP PHASE1:Mm9::chr7:125591434..125591462,-: Difference between revisions
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{{FFCP|EntrezGene=110058|HGNC=|UniProt=|association_with_transcript=270bp_to_uc009jjv.1,uc009jjw.1_5end|description=CAGE_peak_2_at_Syt17_5end|id=chr7:125591434..125591462,-|ontology_enrichment_celltype=CL:0000393!2.23e-14!39;CL:0000211!2.23e-14!39;CL:0000055!1.70e-13!50;CL:0000540!3.33e-11!33;CL:0000047!3.33e-11!33;CL:0000031!3.33e-11!33;CL:0000404!3.33e-11!33;CL:0002319!3.75e-11!43;CL:0000221!7.15e-11!44;CL:0000133!7.15e-11!44;CL:0000117!9.84e-07!23;CL:0000337!9.84e-07!23|ontology_enrichment_celltype_v019_2=CL:0000393,1.92e-25,39;CL:0000211,1.92e-25,39;CL:0000540,1.17e-19,33;CL:0000047,1.17e-19,33;CL:0000031,1.17e-19,33;CL:0000404,1.17e-19,33;CL:0002319,3.15e-18,43;CL:0000221,1.35e-17,44;CL:0000133,1.35e-17,44;CL:0002321,3.05e-13,70;CL:0000117,1.09e-11,23;CL:0000337,1.09e-11,23;CL:0000107,1.14e-10,9;CL:0000723,2.73e-07,91;CL:0000048,2.73e-07,91;CL:0000680,4.71e-07,6;CL:0000187,4.71e-07,6;CL:0000056,4.71e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.19e-20!73;UBERON:0005743!3.19e-20!73;UBERON:0000073!3.62e-19!75;UBERON:0001016!3.62e-19!75;UBERON:0004121!2.42e-17!102;UBERON:0000924!2.42e-17!102;UBERON:0006601!2.42e-17!102;UBERON:0002346!1.52e-13!71;UBERON:0003075!1.52e-13!71;UBERON:0007284!1.52e-13!71;UBERON:0001049!5.02e-11!52;UBERON:0005068!5.02e-11!52;UBERON:0006241!5.02e-11!52;UBERON:0007135!5.02e-11!52;UBERON:0000955!2.26e-10!50;UBERON:0006238!2.26e-10!50;UBERON:0002616!7.53e-10!49;UBERON:0002020!3.19e-09!34;UBERON:0000033!9.35e-09!63;UBERON:0003080!1.87e-07!40;UBERON:0002780!4.85e-07!39;UBERON:0001890!4.85e-07!39;UBERON:0006240!4.85e-07!39;UBERON:0003056!7.27e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.98e-25,73;UBERON:0001016,9.99e-24,75;UBERON:0004121,9.26e-16,95;UBERON:0000924,9.26e-16,95;UBERON:0006601,9.26e-16,95;UBERON:0000073,9.14e-14,54;UBERON:0001049,8.41e-11,52;UBERON:0005068,8.41e-11,52;UBERON:0006241,8.41e-11,52;UBERON:0007135,8.41e-11,52;UBERON:0002410,1.14e-10,9;UBERON:0010314,2.53e-10,92;UBERON:0002020,2.57e-10,34;UBERON:0002346,4.86e-10,64;UBERON:0003075,4.86e-10,64;UBERON:0007284,4.86e-10,64;UBERON:0000025,5.48e-09,114;UBERON:0000010,2.69e-08,11;UBERON:0004111,3.39e-08,122;UBERON:0000955,4.63e-08,47;UBERON:0006238,4.63e-08,47;UBERON:0010371,9.54e-08,73;UBERON:0001948,2.21e-07,5;UBERON:0002315,2.21e-07,5;UBERON:0002616,2.21e-07,46;UBERON:0003080,8.70e-07,40|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,3.02152363141385,2.73717714292689,2.0190142737785,0,1.09012578190223,0.439372365468944,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0,1.80081605225163,5.44413535883638,1.03134418455488,2.22548106945558,0,1.90149421051854,0,0.889294796111139,0,0,1.4209602298922,1.49800055259202,2.68952813725088,0,0,0.210324961351382,6.56997264128748,4.19650227808066,0.489963196859816,0.287536413054709,0,2.20231761998777,7.66124028511126,6.14426133024974,2.1101806036831,1.46380229763855,2.08365348222704,5.02529398202486,5.06486349028512,8.09830713217094,5.00868595305235,5.69486723196412,1.86399445825301,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0,1.33597925158342,0.520455980298408,1.21786191324856,0.461230994512117,1.05505848386836,1.41106448562846,0.628332956648377,0,0.144599356919912,0,0.323533699894818,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,1.9472783122627,0.457500602818626,0.376963056338593,2.43354048269187,2.55715457330331,5.194701113989,3.89379031362618,0,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.540186389416048,0.452114453507145,0.204109497453984,0.2562274405697,0.655912071918102,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.590292695242212,0.462801338662135,0,0.804820204198858,0,0.16455984991348,1.14917224855367,0.729619285912702,0.292399974850665,1.3173006917463,1.20785776884335,3.99550902271842,0.102904612379284,0,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0,0.667134131534611,0.570676878337677,0.949058123089023,0.164698954724011,0.754005626400808,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.796565093017469,0.189667900953082,0.342745537829186,0,1.83286195060783,1.74557238450863,0.49095073923223,1.64414996523069,2.36176236767363,2.511979645462,2.34454611451421,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.10851914099963,0,0,0,0,1.00503754465089,1.19021820443007,1.95133647857799,1.26108115284953,1.10732344824387,1.11618338060241,1.80249646187312,0.690739927463582,1.3018415272336,0,0,0,0,1.76605648986571,1.64096361229084,0,0.504941854408746,2.83957397474631,1.95219372148319,5.17016154558717,2.86762557543062,1.55959071857676,1.98153571552183,3.64329631507405,3.21481443702443,2.37172666767914,2.89189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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110058 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=270bp_to_uc009jjv.1,uc009jjw.1_5end | |||
|cluster_id=chr7:125591434..125591462,- | |||
|description=CAGE_peak_2_at_Syt17_5end | |||
|id=chr7:125591434..125591462,- | |||
|ontology_enrichment_celltype=CL:0000393!2.23e-14!39;CL:0000211!2.23e-14!39;CL:0000055!1.70e-13!50;CL:0000540!3.33e-11!33;CL:0000047!3.33e-11!33;CL:0000031!3.33e-11!33;CL:0000404!3.33e-11!33;CL:0002319!3.75e-11!43;CL:0000221!7.15e-11!44;CL:0000133!7.15e-11!44;CL:0000117!9.84e-07!23;CL:0000337!9.84e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.92e-25,39;CL:0000211,1.92e-25,39;CL:0000540,1.17e-19,33;CL:0000047,1.17e-19,33;CL:0000031,1.17e-19,33;CL:0000404,1.17e-19,33;CL:0002319,3.15e-18,43;CL:0000221,1.35e-17,44;CL:0000133,1.35e-17,44;CL:0002321,3.05e-13,70;CL:0000117,1.09e-11,23;CL:0000337,1.09e-11,23;CL:0000107,1.14e-10,9;CL:0000723,2.73e-07,91;CL:0000048,2.73e-07,91;CL:0000680,4.71e-07,6;CL:0000187,4.71e-07,6;CL:0000056,4.71e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.19e-20!73;UBERON:0005743!3.19e-20!73;UBERON:0000073!3.62e-19!75;UBERON:0001016!3.62e-19!75;UBERON:0004121!2.42e-17!102;UBERON:0000924!2.42e-17!102;UBERON:0006601!2.42e-17!102;UBERON:0002346!1.52e-13!71;UBERON:0003075!1.52e-13!71;UBERON:0007284!1.52e-13!71;UBERON:0001049!5.02e-11!52;UBERON:0005068!5.02e-11!52;UBERON:0006241!5.02e-11!52;UBERON:0007135!5.02e-11!52;UBERON:0000955!2.26e-10!50;UBERON:0006238!2.26e-10!50;UBERON:0002616!7.53e-10!49;UBERON:0002020!3.19e-09!34;UBERON:0000033!9.35e-09!63;UBERON:0003080!1.87e-07!40;UBERON:0002780!4.85e-07!39;UBERON:0001890!4.85e-07!39;UBERON:0006240!4.85e-07!39;UBERON:0003056!7.27e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.98e-25,73;UBERON:0001016,9.99e-24,75;UBERON:0004121,9.26e-16,95;UBERON:0000924,9.26e-16,95;UBERON:0006601,9.26e-16,95;UBERON:0000073,9.14e-14,54;UBERON:0001049,8.41e-11,52;UBERON:0005068,8.41e-11,52;UBERON:0006241,8.41e-11,52;UBERON:0007135,8.41e-11,52;UBERON:0002410,1.14e-10,9;UBERON:0010314,2.53e-10,92;UBERON:0002020,2.57e-10,34;UBERON:0002346,4.86e-10,64;UBERON:0003075,4.86e-10,64;UBERON:0007284,4.86e-10,64;UBERON:0000025,5.48e-09,114;UBERON:0000010,2.69e-08,11;UBERON:0004111,3.39e-08,122;UBERON:0000955,4.63e-08,47;UBERON:0006238,4.63e-08,47;UBERON:0010371,9.54e-08,73;UBERON:0001948,2.21e-07,5;UBERON:0002315,2.21e-07,5;UBERON:0002616,2.21e-07,46;UBERON:0003080,8.70e-07,40 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,3.02152363141385,2.73717714292689,2.0190142737785,0,1.09012578190223,0.439372365468944,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0,1.80081605225163,5.44413535883638,1.03134418455488,2.22548106945558,0,1.90149421051854,0,0.889294796111139,0,0,1.4209602298922,1.49800055259202,2.68952813725088,0,0,0.210324961351382,6.56997264128748,4.19650227808066,0.489963196859816,0.287536413054709,0,2.20231761998777,7.66124028511126,6.14426133024974,2.1101806036831,1.46380229763855,2.08365348222704,5.02529398202486,5.06486349028512,8.09830713217094,5.00868595305235,5.69486723196412,1.86399445825301,0,0.0755715601067855,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.22836775943812,0,1.33597925158342,0.520455980298408,1.21786191324856,0.461230994512117,1.05505848386836,1.41106448562846,0.628332956648377,0,0.144599356919912,0,0.323533699894818,0,0,0,0.585561594023094,0.628340120440365,0.255457055208591,0,0,0,1.9472783122627,0.457500602818626,0.376963056338593,2.43354048269187,2.55715457330331,5.194701113989,3.89379031362618,0,0.248813941220186,0,0.210441855886474,0.130120442962704,0,0.540186389416048,0.452114453507145,0.204109497453984,0.2562274405697,0.655912071918102,0.517406741478031,0,0,0.175951124163949,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0.590292695242212,0.462801338662135,0,0.804820204198858,0,0.16455984991348,1.14917224855367,0.729619285912702,0.292399974850665,1.3173006917463,1.20785776884335,3.99550902271842,0.102904612379284,0,0.528901133327089,0.426576501070468,0.232236671860439,0.128867461322093,0,0.667134131534611,0.570676878337677,0.949058123089023,0.164698954724011,0.754005626400808,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.796565093017469,0.189667900953082,0.342745537829186,0,1.83286195060783,1.74557238450863,0.49095073923223,1.64414996523069,2.36176236767363,2.511979645462,2.34454611451421,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,1.10851914099963,0,0,0,0,1.00503754465089,1.19021820443007,1.95133647857799,1.26108115284953,1.10732344824387,1.11618338060241,1.80249646187312,0.690739927463582,1.3018415272336,0,0,0,0,1.76605648986571,1.64096361229084,0,0.504941854408746,2.83957397474631,1.95219372148319,5.17016154558717,2.86762557543062,1.55959071857676,1.98153571552183,3.64329631507405,3.21481443702443,2.37172666767914,2.89189184779626,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,5.10659408630682,0,0.258717367565509,0.214337035031592,0.532020700926821,0.356737635204141,0,0.913394847343798,0,0.21183207086382,0.441056796109924,0.65954501176592,0.161464426695906,0.180938774784468,0.119372344003136,0.492422699235184,0.582961673259701,0.556275906031529,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.203319467126849,0.86404272657441,0.627264888043406,1.31017538247707,1.34864346384821,0.578574190077352,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.234714477291508,0,0.314578033277133,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0.358855426437903,0.671538465456314,1.35232715822533,0.375364950902364,0.183151624267265,0,0,1.6942555278512,0.920650473014354,0.572895513439397,1.54667864109319,4.11049511862385,0.755393897389701,3.37511250115903,1.80128481289688,1.81256963593682,1.55328093525546,0.103787347584177,0,0,0,0.209613162627982,1.2869045591501,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,0.50695859978048,1.13175804831646,0.37456602987953,0.448176066834085,0.689225627467359,0.952587382566147,0.231768651889711,0.964546102318525,0,0.883193520806384,0,0.532427418478012,1.1921809497366,0.581385666529314,0.658765662907314,0.423073039458382,0.365855945745545,0.526139422875686,0.543216455383447,1.68342681497322,0.711810108745045,0.29551344712669,0.818462086339379,0.154936841185966,0,0.749431733813838,0.701794825336225,0.859484216193193,0.57386499620653,0.882365676478062,0.695603506861264 | |||
|short_description=p2@Syt17 | |||
}} |
Latest revision as of 18:58, 25 September 2015
Short description: | p2@Syt17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syt17_5end |
Coexpression cluster: | NA |
Association with transcript: | 270bp_to_uc009jjv.1, uc009jjw.1_5end |
EntrezGene: | Syt17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.92e-25 | 39 |
electrically active cell | 1.92e-25 | 39 |
neuron | 1.17e-19 | 33 |
neuronal stem cell | 1.17e-19 | 33 |
neuroblast | 1.17e-19 | 33 |
electrically signaling cell | 1.17e-19 | 33 |
neural cell | 3.15e-18 | 43 |
ectodermal cell | 1.35e-17 | 44 |
neurectodermal cell | 1.35e-17 | 44 |
embryonic cell | 3.05e-13 | 70 |
CNS neuron (sensu Vertebrata) | 1.09e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-11 | 23 |
autonomic neuron | 1.14e-10 | 9 |
somatic stem cell | 2.73e-07 | 91 |
multi fate stem cell | 2.73e-07 | 91 |
muscle precursor cell | 4.71e-07 | 6 |
muscle cell | 4.71e-07 | 6 |
myoblast | 4.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.98e-25 | 73 |
nervous system | 9.99e-24 | 75 |
ectoderm-derived structure | 9.26e-16 | 95 |
ectoderm | 9.26e-16 | 95 |
presumptive ectoderm | 9.26e-16 | 95 |
regional part of nervous system | 9.14e-14 | 54 |
neural tube | 8.41e-11 | 52 |
neural rod | 8.41e-11 | 52 |
future spinal cord | 8.41e-11 | 52 |
neural keel | 8.41e-11 | 52 |
autonomic nervous system | 1.14e-10 | 9 |
structure with developmental contribution from neural crest | 2.53e-10 | 92 |
gray matter | 2.57e-10 | 34 |
neurectoderm | 4.86e-10 | 64 |
neural plate | 4.86e-10 | 64 |
presumptive neural plate | 4.86e-10 | 64 |
tube | 5.48e-09 | 114 |
peripheral nervous system | 2.69e-08 | 11 |
anatomical conduit | 3.39e-08 | 122 |
brain | 4.63e-08 | 47 |
future brain | 4.63e-08 | 47 |
ecto-epithelium | 9.54e-08 | 73 |
regional part of spinal cord | 2.21e-07 | 5 |
gray matter of spinal cord | 2.21e-07 | 5 |
regional part of brain | 2.21e-07 | 46 |
anterior neural tube | 8.70e-07 | 40 |