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FFCP PHASE1:Mm9::chr11:118947580..118947598,-: Difference between revisions

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(Created page with "{{FFCP |id=chr11:118947580..118947598,- |short_description=p2@Cbx4 |description=CAGE_peak_2_at_Cbx4_5end |association_with_transcript=-29bp_to_NM_007625,uc007mpw.2,uc007mp...")
 
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{{FFCP
{{FFCP
|id=chr11:118947580..118947598,-
|DHSsupport=NA
|short_description=p2@Cbx4
|DPIdataset=NA
|description=CAGE_peak_2_at_Cbx4_5end
|association_with_transcript=-29bp_to_NM_007625,uc007mpw.2,uc007mpx.2_5end
|EntrezGene=12418
|EntrezGene=12418
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A2ABG5,O55187
|UniProt=A2ABG5,O55187
|association_with_transcript=-29bp_to_NM_007625,uc007mpw.2,uc007mpx.2_5end
|cluster_id=chr11:118947580..118947598,-
|description=CAGE_peak_2_at_Cbx4_5end
|id=chr11:118947580..118947598,-
|ontology_enrichment_celltype=CL:0000117!7.59e-10!23;CL:0000337!7.59e-10!23;CL:0000221!3.68e-09!44;CL:0000133!3.68e-09!44;CL:0002319!6.74e-09!43;CL:0000540!8.30e-09!33;CL:0000047!8.30e-09!33;CL:0000031!8.30e-09!33;CL:0000404!8.30e-09!33;CL:0000055!1.01e-08!50;CL:0000393!1.13e-08!39;CL:0000211!1.13e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.48e-10,23;CL:0000337,7.48e-10,23;CL:0000221,3.63e-09,44;CL:0000133,3.63e-09,44;CL:0002319,6.66e-09,43;CL:0000540,8.20e-09,33;CL:0000047,8.20e-09,33;CL:0000031,8.20e-09,33;CL:0000404,8.20e-09,33;CL:0000393,1.12e-08,39;CL:0000211,1.12e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.00e-21!73;UBERON:0005743!3.00e-21!73;UBERON:0000073!3.35e-20!75;UBERON:0001016!3.35e-20!75;UBERON:0004121!5.09e-20!102;UBERON:0000924!5.09e-20!102;UBERON:0006601!5.09e-20!102;UBERON:0001049!1.29e-17!52;UBERON:0005068!1.29e-17!52;UBERON:0006241!1.29e-17!52;UBERON:0007135!1.29e-17!52;UBERON:0002346!1.58e-17!71;UBERON:0003075!1.58e-17!71;UBERON:0007284!1.58e-17!71;UBERON:0000955!4.64e-17!50;UBERON:0006238!4.64e-17!50;UBERON:0002616!1.96e-16!49;UBERON:0002020!2.33e-15!34;UBERON:0000033!3.87e-15!63;UBERON:0000153!6.13e-15!94;UBERON:0007811!6.55e-15!86;UBERON:0002791!6.10e-13!29;UBERON:0003528!6.10e-13!29;UBERON:0001893!6.10e-13!29;UBERON:0003080!1.33e-11!40;UBERON:0002780!4.39e-11!39;UBERON:0001890!4.39e-11!39;UBERON:0006240!4.39e-11!39;UBERON:0003056!1.32e-09!49;UBERON:0000956!9.77e-09!21;UBERON:0001869!9.77e-09!21;UBERON:0000203!9.77e-09!21;UBERON:0002619!1.35e-08!17;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10;UBERON:0003076!3.69e-07!12;UBERON:0003057!3.69e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.89e-21,73;UBERON:0001016,3.24e-20,75;UBERON:0000073,5.70e-19,54;UBERON:0001049,1.26e-17,52;UBERON:0005068,1.26e-17,52;UBERON:0006241,1.26e-17,52;UBERON:0007135,1.26e-17,52;UBERON:0004121,1.51e-17,95;UBERON:0000924,1.51e-17,95;UBERON:0006601,1.51e-17,95;UBERON:0002020,2.28e-15,34;UBERON:0000955,2.80e-15,47;UBERON:0006238,2.80e-15,47;UBERON:0002346,3.10e-15,64;UBERON:0003075,3.10e-15,64;UBERON:0007284,3.10e-15,64;UBERON:0010371,8.07e-15,73;UBERON:0002616,1.14e-14,46;UBERON:0010314,4.52e-13,92;UBERON:0003528,5.98e-13,29;UBERON:0002791,5.98e-13,29;UBERON:0001893,5.98e-13,29;UBERON:0003080,1.31e-11,40;UBERON:0002780,4.31e-11,39;UBERON:0001890,4.31e-11,39;UBERON:0006240,4.31e-11,39;UBERON:0003056,1.30e-09,49;UBERON:0000956,9.65e-09,21;UBERON:0001869,9.65e-09,21;UBERON:0000203,9.65e-09,21;UBERON:0002619,1.33e-08,17;UBERON:0002021,1.12e-07,10;UBERON:0000411,1.12e-07,10;UBERON:0001950,1.12e-07,10;UBERON:0003076,3.65e-07,12;UBERON:0003057,3.65e-07,12
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0205896336545,1.30877970992015,1.16653475962614,3.72803587852155,1.69107881605257,4.48549638131936,3.47462829959905,3.88902376688095,4.26227417476513,2.87225413334323,4.92900402312167,3.25510962109875,5.24296722128554,2.89900944991207,1.72818003754719,1.26404448251271,2.43270258348197,2.77319584345034,2.07873316764472,3.93858730468459,3.3775830312815,3.12508168751919,2.80610101631697,3.02899349844443,3.42930629947499,2.82313318383153,3.02119430293232,2.88635524920988,2.92192255453922,2.26730383615211,7.32553646134413,3.6782681209885,5.37230772365051,3.86379188064381,1.12609485270709,2.38097111547445,2.35805216986972,2.50786052017682,10.7302850097243,11.9684561491866,8.59343270159095,9.10821866421544,15.7568979547248,12.8416962556249,8.77529250301348,10.3573876741571,9.9691329976525,18.1216109113137,1.86817225651518,3.19219898720825,0.853668028770671,1.70174701947806,1.88651846365184,3.30918315210025,2.889207461421,3.7086310303001,2.24643446714271,2.77966932940177,4.56262739802432,2.26351609663291,2.1537546718073,3.45735822986294,3.27382173046996,3.81034953026459,2.43357084484197,2.89363830695558,2.06042950401653,2.94397840268795,2.40008476669791,2.30718548007139,3.09967046931517,3.34296758254356,3.29382831453657,2.62305284464197,3.29270351170991,2.89376682581627,2.71608227691724,4.48913817326191,2.25406534435931,2.75812550651578,2.04615521584845,3.25367366490529,3.08650577569826,4.49659040288303,2.33931608445408,3.00819475667618,3.06061331310149,2.64709702943419,0.927471342481686
|phase1_expression=4.80446541314382,2.44282785347553,2.72999543633722,3.32710632437513,4.50806156951712,2.01455126294268,3.73780224952841,3.09895976259783,3.51971805379167,6.55380673701582,0.513653904676515,1.27635454392538,3.25281386869291,4.54586092578786,2.33176833270964,1.01237633694913,0,2.99689057090326,2.60517423850904,1.69755860719212,3.82694805679814,4.0709289992363,1.30599894569468,0.319984845586813,0.22940928106717,0.57423196411502,0.430761996159075,1.72376986148711,0.380046838912748,0.756090389279792,1.10865255327652,1.27006134691926,2.46025915033828,0,0.288851619751275,1.16364251750945,0.816677425049476,3.76678467663217,3.1253413780952,0.523523743973798,2.35292595212406,2.04913645487534,1.94204141212461,2.64383317748712,3.75094645512204,3.30384153891027,8.60630478782843,4.57852828398938,2.63623419281366,3.30530828426282,2.37976916763116,4.31257693094915,1.17447824240415,4.35217285206807,2.68875039313971,4.63066984864705,2.0057340795713,3.09403255366465,5.46254444320914,7.40587370980846,5.70448263155561,3.04960078862219,6.22506357277798,1.7997994345628,3.9554654502679,2.8419204597844,2.99600110518405,6.53171119046643,3.94020526772215,2.97013064329719,2.73422449756797,7.14127461009509,9.93908434282261,3.55223317723367,3.92966431174769,4.5960939330501,7.70811166995721,11.4918604276669,9.83081812839958,5.01167893374737,7.31901148819277,4.68822033501084,11.1673199600552,11.8180148106653,6.72312290217964,6.77645746589436,6.97621235915604,4.28718725398191,1.59025005999687,2.49386148352392,1.44932244350839,2.58127163094416,0,1.61910957491345,0,0,2.10666630197628,3.2381761289831,2.07828803682295,2.82671659608272,4.08445917352373,3.84979432242953,10.1922095882658,21.3320010945999,0.865964164044856,0.253359865475099,0,1.59857431606684,1.55362730188303,5.93768556259299,2.60227990149204,5.48037860961854,5.30415643688935,5.87818298155228,4.35078216402108,4.90099706185734,2.96633961281249,1.59059292611903,3.5384422077995,2.10296904931632,0.883366073841574,2.42437626567611,0,6.73395833126558,10.0534419270458,0.255457055208591,2.63593273913025,4.79922184794726,2.1601938602421,8.53806644607489,15.5550204958333,8.92145900001337,7.82209440865244,15.3429274398198,7.48036960414416,10.707923362472,4.27725328171328,1.8661045591514,2.77995034277042,1.47309299120532,1.82168620147785,1.37941262660084,1.62055916824814,3.31550599238573,3.6739709541717,2.69038812598185,3.37326208415024,4.39795730256327,1.94011193639558,3.59301552318857,2.28736461413134,3.94552318369635,4.17070873838397,3.48252166522167,3.70407845534298,2.9855140022774,1.40442637462647,3.86021860672073,3.40996199274711,3.10688658803253,1.64168241986767,3.42117916775928,2.3674473558521,2.36117078096885,2.77680803197281,3.0229412817553,1.60964040839772,3.26942958628075,2.13927804887525,1.64167464079095,1.29710095273369,1.46199987425332,0.878200461164203,1.74468344388483,10.5144974282064,6.27718135513635,0.991256348951394,2.11560453330835,2.34617075588757,1.85789337488351,3.35055399437443,1.21010114774006,3.11329261382818,1.52180500890047,1.42358718463353,2.79988223030818,2.76468729680296,3.38226002469956,1.55971269695296,1.79763881730844,0.648414149624083,0.796565093017469,3.41402221715547,1.5994791765362,2.25415471346161,0.610953983535943,0.775809948670503,3.29638353484497,2.15004226222475,1.91893192373483,0.470996183524124,1.97435462274881,0.889357881261447,0.83422552858047,1.17935397067922,0.224862112384854,0.811440485554012,1.20588579876208,1.01850340712568,3.16465751195892,1.29708181420028,1.37280706594041,1.43768206527355,1.11642284300551,1.24815069245824,1.01031551178845,1.61457672169721,1.4473305640901,2.40179147216586,1.70542270593436,4.56301934037672,2.71592137240301,3.52035372432753,2.68010011906905,2.38043640886014,2.92700471786698,2.83743259391144,3.32197034473162,3.50800491046472,1.14704320301017,2.41758974612254,1.59113964439663,1.50791283939272,2.71952841909355,3.44234991113325,1.37968373152366,8.50918126935297,9.61135830056066,3.11476396215683,2.01976741763498,2.52406575533005,3.90438744296638,3.23135096599198,4.30143836314594,3.34198011123591,2.83076530788832,1.61924280669958,3.21481443702443,1.97643888973262,10.2822821254978,2.6968616189571,3.20518086601059,5.70104357737516,2.3095817216155,0,3.15614827001476,2.72091201268276,2.45186603682668,3.2483208216885,1.22974059177571,4.13485269069154,5.81653967164009,1.78248689192361,1.58018378967908,2.10837217149998,1.03135543248187,2.04263763452273,3.06103859853227,2.32845630808958,1.92903331528433,3.01478397191865,1.78368817602071,2.63278432963394,3.65357938937519,5.39744928546534,5.2958017715955,1.10264199027481,3.62749756471256,2.9063596805263,3.07595917133595,2.38744688006273,2.1338316966858,1.45740418314925,6.48988557036784,1.87957968877638,1.65109494370578,2.40752885580625,0.941842285023455,1.6403307326523,1.14389086603261,1.35982743995084,1.95932033253121,3.17859939750175,2.86401185404534,2.53068794864908,2.43983360552218,1.18805874903981,2.71814784818809,1.52853794622324,2.56242258131159,3.80205896336545,1.30877970992015,1.16653475962614,3.72803587852155,1.69107881605257,4.48549638131936,3.47462829959905,3.88902376688095,4.26227417476513,2.87225413334323,4.92900402312167,3.25510962109875,5.24296722128554,2.89900944991207,1.72818003754719,1.26404448251271,2.43270258348197,2.77319584345034,2.07873316764472,3.93858730468459,3.3775830312815,3.12508168751919,2.80610101631697,3.02899349844443,3.42930629947499,2.82313318383153,3.02119430293232,2.88635524920988,2.92192255453922,2.26730383615211,7.32553646134413,3.6782681209885,5.37230772365051,3.86379188064381,1.12609485270709,2.38097111547445,2.35805216986972,2.50786052017682,10.7302850097243,11.9684561491866,8.59343270159095,9.10821866421544,15.7568979547248,12.8416962556249,8.77529250301348,10.3573876741571,9.9691329976525,18.1216109113137,1.86817225651518,3.19219898720825,0.853668028770671,1.70174701947806,1.88651846365184,3.30918315210025,2.889207461421,3.7086310303001,2.24643446714271,2.77966932940177,4.56262739802432,2.26351609663291,2.1537546718073,3.45735822986294,3.27382173046996,3.81034953026459,2.43357084484197,2.89363830695558,2.06042950401653,2.94397840268795,2.40008476669791,2.30718548007139,3.09967046931517,3.34296758254356,3.29382831453657,2.62305284464197,3.29270351170991,2.89376682581627,2.71608227691724,4.48913817326191,2.25406534435931,2.75812550651578,2.04615521584845,3.25367366490529,3.08650577569826,4.49659040288303,2.33931608445408,3.00819475667618,3.06061331310149,2.64709702943419,0.927471342481686
|short_description=p2@Cbx4
}}
}}

Latest revision as of 02:05, 27 September 2015

Short description:p2@Cbx4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cbx4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -29bp_to_NM_007625, uc007mpw.2, uc007mpx.2_5end
EntrezGene:Cbx4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Cbx4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.63
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.55
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.32
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F55.88
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H11.59
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B210.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G83.37
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G16.28
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G73.30
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B63.52
lung, embryo E17.CNhs10605.480-44A62.68
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.51
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A39.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.11
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.23
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I910.28
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I45.70
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F22.41
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A93.80
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C53.47
testis, embryo E16.CNhs11033.470-26G53.89
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I43.26
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A23.02
thymus, neonate N25.CNhs11125.1362-25G72.89
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.11
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.48e-1023
neuroblast (sensu Vertebrata)7.48e-1023
ectodermal cell3.63e-0944
neurectodermal cell3.63e-0944
neural cell6.66e-0943
neuron8.20e-0933
neuronal stem cell8.20e-0933
neuroblast8.20e-0933
electrically signaling cell8.20e-0933
electrically responsive cell1.12e-0839
electrically active cell1.12e-0839

Uber anatomy
Ontology termp-valuen
central nervous system2.89e-2173
nervous system3.24e-2075
regional part of nervous system5.70e-1954
neural tube1.26e-1752
neural rod1.26e-1752
future spinal cord1.26e-1752
neural keel1.26e-1752
ectoderm-derived structure1.51e-1795
ectoderm1.51e-1795
presumptive ectoderm1.51e-1795
gray matter2.28e-1534
brain2.80e-1547
future brain2.80e-1547
neurectoderm3.10e-1564
neural plate3.10e-1564
presumptive neural plate3.10e-1564
ecto-epithelium8.07e-1573
regional part of brain1.14e-1446
structure with developmental contribution from neural crest4.52e-1392
brain grey matter5.98e-1329
regional part of telencephalon5.98e-1329
telencephalon5.98e-1329
anterior neural tube1.31e-1140
regional part of forebrain4.31e-1139
forebrain4.31e-1139
future forebrain4.31e-1139
pre-chordal neural plate1.30e-0949
cerebral cortex9.65e-0921
cerebral hemisphere9.65e-0921
pallium9.65e-0921
regional part of cerebral cortex1.33e-0817
occipital lobe1.12e-0710
visual cortex1.12e-0710
neocortex1.12e-0710
posterior neural tube3.65e-0712
chordal neural plate3.65e-0712
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