FFCP PHASE1:Mm9::chr9:103122153..103122225,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22041|HGNC=|MCL_coexpression_id=5|UniProt=F7CJN9|association_with_transcript=0bp_to_ENSMUST00000168142_5end|description=CAGE_peak_4_at_Trf_5end|id=chr9:103122153..103122225,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.32e-16!25;UBERON:0002330!1.32e-16!25;UBERON:0002107!6.67e-15!22;UBERON:0007499!6.67e-15!22;UBERON:0006925!6.67e-15!22;UBERON:0009497!6.67e-15!22;UBERON:0000015!6.67e-15!22;UBERON:0002423!6.67e-15!22;UBERON:0006235!6.67e-15!22;UBERON:0008835!6.67e-15!22;UBERON:0003894!6.67e-15!22;UBERON:0004161!6.67e-15!22;UBERON:0008836!6.67e-15!22;UBERON:0009854!9.40e-14!23;UBERON:0009856!9.40e-14!23;UBERON:0005172!2.89e-07!49;UBERON:0005173!2.89e-07!49;UBERON:0002417!2.89e-07!49;UBERON:0000916!2.89e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.50e-24,25;UBERON:0002330,1.50e-24,25;UBERON:0002107,2.74e-23,22;UBERON:0007499,2.74e-23,22;UBERON:0006925,2.74e-23,22;UBERON:0009497,2.74e-23,22;UBERON:0000015,2.74e-23,22;UBERON:0002423,2.74e-23,22;UBERON:0006235,2.74e-23,22;UBERON:0008835,2.74e-23,22;UBERON:0003894,2.74e-23,22;UBERON:0004161,2.74e-23,22;UBERON:0008836,2.74e-23,22;UBERON:0009854,5.72e-22,23;UBERON:0009856,5.72e-22,23;UBERON:0005256,8.48e-10,45;UBERON:0005172,1.83e-08,49;UBERON:0005173,1.83e-08,49;UBERON:0002417,1.83e-08,49;UBERON:0000916,1.83e-08,49;UBERON:0003914,1.86e-07,47|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0.84877930359606,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0.633831403506179,0,0,0.449949858640699,0.988866362566974,2.8419204597844,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,1.14918604276669,1.38245879930619,0,0.0914876436024097,0,1.3959149950069,0.56276261003168,1.22238598221448,0,0.142371680799103,0,0,0,0,43.0211938490693,55.0776780303278,94.9877617282558,59.1296539877379,18.8171292580881,4.49422144421606,0,0,0,0,0,0,0,0,0,0,9.02052649780574,0.258937883647172,0.29688427812965,0,0.304465478312141,2.07553947530453,1.20578112442098,0.705532242814229,0.251333182659351,25.7082766443749,0.144599356919912,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0.239630249011841,0,0.127070227073065,0.748953197024114,0.457500602818626,0,0,0,1.24672826735736,0.162241263067758,0,0.124406970610093,0,0,0.130120442962704,0,0,0.753524089178575,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0.439100230582101,0,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0.502670417600539,0.596869416123452,0,0.898819408654221,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0,0.295220295959204,0,0,21.937494404449,2.00214126859313,0.982794975566015,1.79889689907883,4.86864291332407,11.0941493486112,36.411496804743,50.059127916441,26.5901771911058,40.9096505650241,687.212027200755,42.0519270865409,56.1667811606209,28.0362554521294,26.0126249606773,29.4290548031654,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,1.75620283072019,0.630540576424764,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,0,49.6681915749227,17.9358885098076,1.44495530989013,1.28932855251423,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0,0,0.283880170416537,1.6025904330053,0,0,0,0.242780636154981,0,0,0,0.614870295887855,0.516856586336442,0.727067458955011,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0,2.75381692122966,0,0.65954501176592,0.161464426695906,0.120625849856312,0,0.164140899745061,0,1.11255181206306,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0,0,1.74690050996942,1.21377911746339,3.14083131756277,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,1.17183946359555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.288635524920988,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0.853668028770671,1.94485373654635,0.419226325255965,2.75765262675021,4.4449345560323,3.29656091582231,2.24643446714271,1.76888048234658,3.04175159868288,0.943131706930381,3.09016974650612,2.36893063898016,1.60819313075717,2.85776214769844,2.31768651889711,2.12200142510076,4.12085900803307,4.26876868389752,4.11443102862498,3.72699192934609,5.00715998889374,3.19762116591123,2.1645157495526,2.28459441307527,1.46342378298218,2.89376682581627,3.80251518768413,3.36685362994643,2.84724043498018,2.85662998889134,3.6830793885272,3.25367366490529,3.66522560864169,0,4.21076895201735,1.93383948643468,0.382576664137687,0.441182838239031,0.463735671240843|short_description=p4@Trf}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22041 | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt=F7CJN9 | |||
|association_with_transcript=0bp_to_ENSMUST00000168142_5end | |||
|cluster_id=chr9:103122153..103122225,- | |||
|description=CAGE_peak_4_at_Trf_5end | |||
|id=chr9:103122153..103122225,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.32e-16!25;UBERON:0002330!1.32e-16!25;UBERON:0002107!6.67e-15!22;UBERON:0007499!6.67e-15!22;UBERON:0006925!6.67e-15!22;UBERON:0009497!6.67e-15!22;UBERON:0000015!6.67e-15!22;UBERON:0002423!6.67e-15!22;UBERON:0006235!6.67e-15!22;UBERON:0008835!6.67e-15!22;UBERON:0003894!6.67e-15!22;UBERON:0004161!6.67e-15!22;UBERON:0008836!6.67e-15!22;UBERON:0009854!9.40e-14!23;UBERON:0009856!9.40e-14!23;UBERON:0005172!2.89e-07!49;UBERON:0005173!2.89e-07!49;UBERON:0002417!2.89e-07!49;UBERON:0000916!2.89e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.50e-24,25;UBERON:0002330,1.50e-24,25;UBERON:0002107,2.74e-23,22;UBERON:0007499,2.74e-23,22;UBERON:0006925,2.74e-23,22;UBERON:0009497,2.74e-23,22;UBERON:0000015,2.74e-23,22;UBERON:0002423,2.74e-23,22;UBERON:0006235,2.74e-23,22;UBERON:0008835,2.74e-23,22;UBERON:0003894,2.74e-23,22;UBERON:0004161,2.74e-23,22;UBERON:0008836,2.74e-23,22;UBERON:0009854,5.72e-22,23;UBERON:0009856,5.72e-22,23;UBERON:0005256,8.48e-10,45;UBERON:0005172,1.83e-08,49;UBERON:0005173,1.83e-08,49;UBERON:0002417,1.83e-08,49;UBERON:0000916,1.83e-08,49;UBERON:0003914,1.86e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0.84877930359606,0.510259740906419,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0.633831403506179,0,0,0.449949858640699,0.988866362566974,2.8419204597844,0.299600110518405,0.384218305321555,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,1.14918604276669,1.38245879930619,0,0.0914876436024097,0,1.3959149950069,0.56276261003168,1.22238598221448,0,0.142371680799103,0,0,0,0,43.0211938490693,55.0776780303278,94.9877617282558,59.1296539877379,18.8171292580881,4.49422144421606,0,0,0,0,0,0,0,0,0,0,9.02052649780574,0.258937883647172,0.29688427812965,0,0.304465478312141,2.07553947530453,1.20578112442098,0.705532242814229,0.251333182659351,25.7082766443749,0.144599356919912,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0.239630249011841,0,0.127070227073065,0.748953197024114,0.457500602818626,0,0,0,1.24672826735736,0.162241263067758,0,0.124406970610093,0,0,0.130120442962704,0,0,0.753524089178575,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0.439100230582101,0,0.210289948564127,0.205809224758569,0,0,0,0.232236671860439,0,0.201683524623343,0,0.190225626112559,0,0.494096864172033,0.502670417600539,0.596869416123452,0,0.898819408654221,0,0,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0,0.295220295959204,0,0,21.937494404449,2.00214126859313,0.982794975566015,1.79889689907883,4.86864291332407,11.0941493486112,36.411496804743,50.059127916441,26.5901771911058,40.9096505650241,687.212027200755,42.0519270865409,56.1667811606209,28.0362554521294,26.0126249606773,29.4290548031654,0.184753190166605,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,1.75620283072019,0.630540576424764,0.44292937929755,0.159454768657487,0.163863314715738,0.172684981865896,0.144649058581512,1.50791283939272,0,49.6681915749227,17.9358885098076,1.44495530989013,1.28932855251423,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.445597348164788,0,0.404810701674894,0,0,0,0.283880170416537,1.6025904330053,0,0,0,0.242780636154981,0,0,0,0.614870295887855,0.516856586336442,0.727067458955011,1.06949213515416,0,0,0,0,0,0,0,0,0,0,0,0,2.75381692122966,0,0.65954501176592,0.161464426695906,0.120625849856312,0,0.164140899745061,0,1.11255181206306,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,0,0.139951452323658,0.276399947608848,0,0,0.203319467126849,0,0,1.74690050996942,1.21377911746339,3.14083131756277,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,1.17183946359555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0.288635524920988,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0.853668028770671,1.94485373654635,0.419226325255965,2.75765262675021,4.4449345560323,3.29656091582231,2.24643446714271,1.76888048234658,3.04175159868288,0.943131706930381,3.09016974650612,2.36893063898016,1.60819313075717,2.85776214769844,2.31768651889711,2.12200142510076,4.12085900803307,4.26876868389752,4.11443102862498,3.72699192934609,5.00715998889374,3.19762116591123,2.1645157495526,2.28459441307527,1.46342378298218,2.89376682581627,3.80251518768413,3.36685362994643,2.84724043498018,2.85662998889134,3.6830793885272,3.25367366490529,3.66522560864169,0,4.21076895201735,1.93383948643468,0.382576664137687,0.441182838239031,0.463735671240843 | |||
|short_description=p4@Trf | |||
}} |
Latest revision as of 01:52, 26 September 2015
Short description: | p4@Trf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trf_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | 0bp_to_ENSMUST00000168142_5end |
EntrezGene: | Trf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.50e-24 | 25 |
exocrine system | 1.50e-24 | 25 |
liver | 2.74e-23 | 22 |
epithelial sac | 2.74e-23 | 22 |
digestive gland | 2.74e-23 | 22 |
epithelium of foregut-midgut junction | 2.74e-23 | 22 |
anatomical boundary | 2.74e-23 | 22 |
hepatobiliary system | 2.74e-23 | 22 |
foregut-midgut junction | 2.74e-23 | 22 |
hepatic diverticulum | 2.74e-23 | 22 |
liver primordium | 2.74e-23 | 22 |
septum transversum | 2.74e-23 | 22 |
liver bud | 2.74e-23 | 22 |
digestive tract diverticulum | 5.72e-22 | 23 |
sac | 5.72e-22 | 23 |
trunk mesenchyme | 8.48e-10 | 45 |
abdomen element | 1.83e-08 | 49 |
abdominal segment element | 1.83e-08 | 49 |
abdominal segment of trunk | 1.83e-08 | 49 |
abdomen | 1.83e-08 | 49 |
epithelial tube | 1.86e-07 | 47 |