Personal tools

FFCP PHASE1:Mm9::chr11:40547379..40547433,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr11:40547379..40547433,+ |short_description=p1@Nudcd2 |description=CAGE_peak_1_at_Nudcd2_5end |association_with_transcript=-14bp_to_ENSMUST00000127382_5end |...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:40547379..40547433,+
|DHSsupport=NA
|short_description=p1@Nudcd2
|DPIdataset=NA
|description=CAGE_peak_1_at_Nudcd2_5end
|association_with_transcript=-14bp_to_ENSMUST00000127382_5end
|EntrezGene=52653
|EntrezGene=52653
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=E0CYQ2
|UniProt=E0CYQ2
|association_with_transcript=-14bp_to_ENSMUST00000127382_5end
|cluster_id=chr11:40547379..40547433,+
|description=CAGE_peak_1_at_Nudcd2_5end
|id=chr11:40547379..40547433,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!2.91e-07!25;UBERON:0002330!2.91e-07!25;UBERON:0002107!4.87e-07!22;UBERON:0007499!4.87e-07!22;UBERON:0006925!4.87e-07!22;UBERON:0009497!4.87e-07!22;UBERON:0000015!4.87e-07!22;UBERON:0002423!4.87e-07!22;UBERON:0006235!4.87e-07!22;UBERON:0008835!4.87e-07!22;UBERON:0003894!4.87e-07!22;UBERON:0004161!4.87e-07!22;UBERON:0008836!4.87e-07!22
|ontology_enrichment_uberon_v019_2=UBERON:0002100,9.32e-08,90;UBERON:0005177,1.67e-07,79;UBERON:0002365,2.91e-07,25;UBERON:0002330,2.91e-07,25;UBERON:0002107,4.87e-07,22;UBERON:0007499,4.87e-07,22;UBERON:0006925,4.87e-07,22;UBERON:0009497,4.87e-07,22;UBERON:0000015,4.87e-07,22;UBERON:0002423,4.87e-07,22;UBERON:0006235,4.87e-07,22;UBERON:0008835,4.87e-07,22;UBERON:0003894,4.87e-07,22;UBERON:0004161,4.87e-07,22;UBERON:0008836,4.87e-07,22
|phase1_expression=25.623815536767,15.7038933437712,10.9199817453489,7.56160528267075,5.50985302940982,20.4812711732506,24.0621019813391,19.6267451631196,3.37892933164,4.68129052643987,24.6553874244727,21.0598499747688,19.174481752295,23.1664066410343,26.648780945253,26.9292105628469,23.785103856357,16.5617636813075,18.5104485367747,16.1268067683251,10.3752813984305,54.3121503068843,86.1959304158487,21.5989770771099,25.9232487605902,16.6527269593356,18.9535278309993,20.9007095705312,18.812318526181,20.6664706403143,28.1597748532237,15.2407361630311,12.3012957516914,0,31.1959749331377,33.7456330077739,29.6045566580435,8.78916424547506,18.7520482685712,10.9939986234498,4.1176204162171,4.09827290975067,5.34061388334269,60.8081630822038,52.20911957805,57.4501334266063,21.1245662973971,31.1775973624039,21.9686182734472,28.1923353657711,38.6362523686001,20.125359011096,12.9192606664457,13.7818806982155,19.8295341494054,38.0743965333202,27.2206767941819,37.1283906439758,13.1505699558739,9.52183762689659,10.775133859605,35.5786758672589,24.0109594950008,21.5975932147536,24.7216590641744,15.6305625288142,21.2716078468067,14.9845139075406,15.8645106831971,14.7156472781543,16.1950220240564,13.7112472513826,18.7738259808871,18.1286382838132,17.1563393122643,11.0306254393203,15.4162233399144,16.343979274904,13.5173749265494,12.7929699098288,14.0890971147711,14.0646610050325,13.6799669510677,14.6318278608237,13.7518422999129,12.6690291753677,18.6506901846825,13.9799584368975,52.251073399897,36.9544928922181,14.7830889237856,43.0211938490693,35.358509352803,35.6204106480959,36.3874793770695,29.5697745484241,25.1395512035836,38.6876832252191,38.7081146858274,38.1606740471167,29.7179615728796,23.0987659345772,12.7402619853323,7.11066703153331,44.1641723662877,45.8581356509928,44.9916756063157,26.71902785426,12.9468941823586,19.2974780784272,37.6463159082515,30.4465478312141,24.9064737036543,30.2952507510771,26.3398703983979,24.002318943968,17.7980376768749,17.2073234734695,15.9229899350977,29.1180329905337,21.6424688091186,24.7286379098963,13.0474232852686,14.0534782565543,13.6140359428746,17.8819938646014,43.7325204446609,64.1895922162946,50.7010206021528,15.7280171375064,16.4700217014706,14.5759048450923,13.5582969749976,17.1329356411321,12.6750707181332,14.6017136760982,27.3947888757351,24.6325801807984,26.2831668771022,16.2040229032585,43.3301075065803,42.0720851113255,30.2504378072987,31.4973069276644,21.9077527267276,30.1067242669397,17.8033276663485,18.3679393224701,33.6286068975234,31.2025032276902,24.9850596312807,30.9065982722881,22.799874436499,23.3328951569852,25.1054206417691,26.8696260204966,81.4567297283352,57.9032791008109,40.9195439129653,29.4118597000413,34.0062786972589,31.1507366327556,26.988899856714,22.431122419204,24.3742038362058,25.113666033044,23.6080593231665,22.068649707395,20.2408615393581,19.043425833175,17.5919316714507,16.9591985413385,20.8572609526498,17.8494536951294,13.4585567081041,19.7576855768226,7.59963200862735,21.1560453330835,38.3918850963421,27.8684006232526,25.6446248030966,28.4373769718913,21.5706702529524,29.6751976735592,19.455691523325,23.3872515708095,19.8554814952213,18.3039954277859,21.056121408865,12.5834717211591,17.7233200897249,18.1218558661474,36.4162369829917,31.7610865055046,29.3040112750009,36.2499363564659,27.7352056649705,25.8099817196372,23.5239918102237,20.2225902732055,24.8057989989372,23.4454611451421,34.3885047421093,34.3700917775154,38.1324450519614,33.9541789701129,34.689080757434,33.2824480458335,39.9762587296829,42.57902834272,36.1561555708329,37.3403521935791,25.8782771749238,37.2140947668503,31.2037673114561,39.1497260818023,39.2880335612988,25.5695066322585,14.2259956428286,42.8250590601296,29.4966607360067,34.288507326588,26.7546883048892,21.1057884376688,16.901098502907,18.7328301943487,23.0147310395039,21.4820748959312,16.5832959403787,17.8611013040154,16.9231282228578,16.2006945611293,18.0949540727127,21.2123216689297,37.8658490224658,31.4567890787395,14.1284519189257,13.5965556446956,43.6066954701957,25.4995636476417,50.1658068871848,42.9482618726302,29.5130054893935,46.8378843987002,37.6529759199246,30.5722653251939,40.8858808691643,36.2397263810027,37.9476266828663,12.5315313404505,19.5877317587411,15.8478387263857,27.3650091714008,16.0021019283359,14.6019652173959,31.8042633363026,30.2323556964751,44.510798822392,25.3959627877465,39.3516989368227,31.528251766523,32.7180356529755,33.5107535681638,48.037587206244,39.0048851727495,38.1601510018291,22.46901397975,29.1698972330723,20.8267480890235,25.0774330986963,22.3448694389265,24.9716344642899,23.6950589667054,15.5277124048446,31.4460088805372,21.6068712281097,20.0680842230015,15.6641940294406,29.063596805263,24.4870475208313,25.1875645846618,26.4266848589549,17.7803310344209,14.4631735568198,17.9414424837745,25.7983584954028,32.5942368170693,21.8507410125442,20.9142168413169,25.394377225924,30.0861821089124,33.4483971053543,27.6399947608848,19.0934123603023,42.072687146291,29.6846422005199,29.5934633851735,29.0632731460112,20.7444435558869,23.8709893101133,21.5725519443127,22.5110110106265,14.2576470620972,21.1255366449555,4.50954350947352,25.2682962814324,32.264405639134,26.8342639914786,29.4484397529227,28.21567295696,24.4103056383168,21.8743366537836,18.2455259300737,8.45544422891021,7.20075015644664,20.2247117202034,30.0033318629443,27.5265365201737,28.9723435240483,23.2734704367726,19.470772768564,17.6687310794354,19.9380861685679,17.2652629411332,16.232049817515,17.3421038435366,14.5212242302231,18.6650972782239,15.3108741857855,14.964205318604,54.1645726232718,63.6968381927277,58.2559618783352,11.9777548299958,31.7183383512498,20.696133542201,18.4356806007997,24.5770330977328,22.5900737046827,22.5559365888517,17.7597609166213,13.2326950404639,10.2762377965596,21.1510291269116,16.8755625057951,11.7083512838297,12.2348450425735,14.497288729051,42.5528125095124,28.7297908848742,32.7808523047938,30.8745530676733,39.1976614114327,35.1141101139527,29.5588147976148,30.2871534141174,39.1521435702015,31.5871514704747,28.8966401874873,28.2939512079114,26.6878296289165,23.6893063898016,23.9505905544907,15.2413981210584,28.1598912045999,27.5860185263098,20.6042950401653,32.5309613497018,28.8010172003749,26.9763225362193,28.1354704137839,27.4704727435101,29.2680173091678,27.1612891332282,24.146492419206,36.3036201784223,29.8769050460896,35.3519631144375,27.4046891866842,28.9603178184157,28.6461730218783,27.26888404873,24.3062329836238,16.2376875659665,25.2646137121041,26.644010701989,21.6155815237793,25.8091960369833,34.7801753430632
|phase1_expression=25.623815536767,15.7038933437712,10.9199817453489,7.56160528267075,5.50985302940982,20.4812711732506,24.0621019813391,19.6267451631196,3.37892933164,4.68129052643987,24.6553874244727,21.0598499747688,19.174481752295,23.1664066410343,26.648780945253,26.9292105628469,23.785103856357,16.5617636813075,18.5104485367747,16.1268067683251,10.3752813984305,54.3121503068843,86.1959304158487,21.5989770771099,25.9232487605902,16.6527269593356,18.9535278309993,20.9007095705312,18.812318526181,20.6664706403143,28.1597748532237,15.2407361630311,12.3012957516914,0,31.1959749331377,33.7456330077739,29.6045566580435,8.78916424547506,18.7520482685712,10.9939986234498,4.1176204162171,4.09827290975067,5.34061388334269,60.8081630822038,52.20911957805,57.4501334266063,21.1245662973971,31.1775973624039,21.9686182734472,28.1923353657711,38.6362523686001,20.125359011096,12.9192606664457,13.7818806982155,19.8295341494054,38.0743965333202,27.2206767941819,37.1283906439758,13.1505699558739,9.52183762689659,10.775133859605,35.5786758672589,24.0109594950008,21.5975932147536,24.7216590641744,15.6305625288142,21.2716078468067,14.9845139075406,15.8645106831971,14.7156472781543,16.1950220240564,13.7112472513826,18.7738259808871,18.1286382838132,17.1563393122643,11.0306254393203,15.4162233399144,16.343979274904,13.5173749265494,12.7929699098288,14.0890971147711,14.0646610050325,13.6799669510677,14.6318278608237,13.7518422999129,12.6690291753677,18.6506901846825,13.9799584368975,52.251073399897,36.9544928922181,14.7830889237856,43.0211938490693,35.358509352803,35.6204106480959,36.3874793770695,29.5697745484241,25.1395512035836,38.6876832252191,38.7081146858274,38.1606740471167,29.7179615728796,23.0987659345772,12.7402619853323,7.11066703153331,44.1641723662877,45.8581356509928,44.9916756063157,26.71902785426,12.9468941823586,19.2974780784272,37.6463159082515,30.4465478312141,24.9064737036543,30.2952507510771,26.3398703983979,24.002318943968,17.7980376768749,17.2073234734695,15.9229899350977,29.1180329905337,21.6424688091186,24.7286379098963,13.0474232852686,14.0534782565543,13.6140359428746,17.8819938646014,43.7325204446609,64.1895922162946,50.7010206021528,15.7280171375064,16.4700217014706,14.5759048450923,13.5582969749976,17.1329356411321,12.6750707181332,14.6017136760982,27.3947888757351,24.6325801807984,26.2831668771022,16.2040229032585,43.3301075065803,42.0720851113255,30.2504378072987,31.4973069276644,21.9077527267276,30.1067242669397,17.8033276663485,18.3679393224701,33.6286068975234,31.2025032276902,24.9850596312807,30.9065982722881,22.799874436499,23.3328951569852,25.1054206417691,26.8696260204966,81.4567297283352,57.9032791008109,40.9195439129653,29.4118597000413,34.0062786972589,31.1507366327556,26.988899856714,22.431122419204,24.3742038362058,25.113666033044,23.6080593231665,22.068649707395,20.2408615393581,19.043425833175,17.5919316714507,16.9591985413385,20.8572609526498,17.8494536951294,13.4585567081041,19.7576855768226,7.59963200862735,21.1560453330835,38.3918850963421,27.8684006232526,25.6446248030966,28.4373769718913,21.5706702529524,29.6751976735592,19.455691523325,23.3872515708095,19.8554814952213,18.3039954277859,21.056121408865,12.5834717211591,17.7233200897249,18.1218558661474,36.4162369829917,31.7610865055046,29.3040112750009,36.2499363564659,27.7352056649705,25.8099817196372,23.5239918102237,20.2225902732055,24.8057989989372,23.4454611451421,34.3885047421093,34.3700917775154,38.1324450519614,33.9541789701129,34.689080757434,33.2824480458335,39.9762587296829,42.57902834272,36.1561555708329,37.3403521935791,25.8782771749238,37.2140947668503,31.2037673114561,39.1497260818023,39.2880335612988,25.5695066322585,14.2259956428286,42.8250590601296,29.4966607360067,34.288507326588,26.7546883048892,21.1057884376688,16.901098502907,18.7328301943487,23.0147310395039,21.4820748959312,16.5832959403787,17.8611013040154,16.9231282228578,16.2006945611293,18.0949540727127,21.2123216689297,37.8658490224658,31.4567890787395,14.1284519189257,13.5965556446956,43.6066954701957,25.4995636476417,50.1658068871848,42.9482618726302,29.5130054893935,46.8378843987002,37.6529759199246,30.5722653251939,40.8858808691643,36.2397263810027,37.9476266828663,12.5315313404505,19.5877317587411,15.8478387263857,27.3650091714008,16.0021019283359,14.6019652173959,31.8042633363026,30.2323556964751,44.510798822392,25.3959627877465,39.3516989368227,31.528251766523,32.7180356529755,33.5107535681638,48.037587206244,39.0048851727495,38.1601510018291,22.46901397975,29.1698972330723,20.8267480890235,25.0774330986963,22.3448694389265,24.9716344642899,23.6950589667054,15.5277124048446,31.4460088805372,21.6068712281097,20.0680842230015,15.6641940294406,29.063596805263,24.4870475208313,25.1875645846618,26.4266848589549,17.7803310344209,14.4631735568198,17.9414424837745,25.7983584954028,32.5942368170693,21.8507410125442,20.9142168413169,25.394377225924,30.0861821089124,33.4483971053543,27.6399947608848,19.0934123603023,42.072687146291,29.6846422005199,29.5934633851735,29.0632731460112,20.7444435558869,23.8709893101133,21.5725519443127,22.5110110106265,14.2576470620972,21.1255366449555,4.50954350947352,25.2682962814324,32.264405639134,26.8342639914786,29.4484397529227,28.21567295696,24.4103056383168,21.8743366537836,18.2455259300737,8.45544422891021,7.20075015644664,20.2247117202034,30.0033318629443,27.5265365201737,28.9723435240483,23.2734704367726,19.470772768564,17.6687310794354,19.9380861685679,17.2652629411332,16.232049817515,17.3421038435366,14.5212242302231,18.6650972782239,15.3108741857855,14.964205318604,54.1645726232718,63.6968381927277,58.2559618783352,11.9777548299958,31.7183383512498,20.696133542201,18.4356806007997,24.5770330977328,22.5900737046827,22.5559365888517,17.7597609166213,13.2326950404639,10.2762377965596,21.1510291269116,16.8755625057951,11.7083512838297,12.2348450425735,14.497288729051,42.5528125095124,28.7297908848742,32.7808523047938,30.8745530676733,39.1976614114327,35.1141101139527,29.5588147976148,30.2871534141174,39.1521435702015,31.5871514704747,28.8966401874873,28.2939512079114,26.6878296289165,23.6893063898016,23.9505905544907,15.2413981210584,28.1598912045999,27.5860185263098,20.6042950401653,32.5309613497018,28.8010172003749,26.9763225362193,28.1354704137839,27.4704727435101,29.2680173091678,27.1612891332282,24.146492419206,36.3036201784223,29.8769050460896,35.3519631144375,27.4046891866842,28.9603178184157,28.6461730218783,27.26888404873,24.3062329836238,16.2376875659665,25.2646137121041,26.644010701989,21.6155815237793,25.8091960369833,34.7801753430632
|short_description=p1@Nudcd2
}}
}}

Latest revision as of 12:03, 1 October 2015

Short description:p1@Nudcd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nudcd2_5end
Coexpression cluster:NA
Association with transcript: -14bp_to_ENSMUST00000127382_5end
EntrezGene:Nudcd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nudcd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.56
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.48
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.06
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F121.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E823.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A326.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A523.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H254.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I986.20
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.92
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I118.95
GP2+ M cell, pool3.CNhs13240.11847-124I220.90
Ileum epithelium, pool1.CNhs13199.10252-104B918.81
Ileum epithelium, pool2.CNhs13232.10253-104C120.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F531.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F633.75
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F729.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H118.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D860.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D952.21
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B357.45
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B721.12
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C231.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.97
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C328.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C438.64
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.92
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.78
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.83
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C138.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E127.22
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C537.13
Mouse Granule cells, donor1.CNhs12131.11713-123C313.15
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C635.58
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C721.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E724.72
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D215.63
Mouse Microglia, donor1.CNhs12629.11718-123C821.27
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.86
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.13
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.98
Mouse Schwann, donor1.CNhs12507.11728-123D952.25
Mouse Schwann, donor2.CNhs12573.11746-123F936.95
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C435.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C835.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F436.39
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I738.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E338.71
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I838.16
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G629.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H123.10
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G144.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G245.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G344.99
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.72
accessory axillary lymph node, adult.CNhs10475.1063-29H912.95
adrenal gland, adult.CNhs10508.49-24D719.30
adrenal gland, embryo E14.CNhs11038.406-44C537.65
adrenal gland, embryo E16.CNhs11004.1254-43D630.45
adrenal gland, embryo E17.CNhs11043.1263-45I124.91
adrenal gland, embryo E18.CNhs11026.1262-18F530.30
adrenal gland, neonate N00.CNhs11191.1311-23C126.34
adrenal gland, neonate N25.CNhs11223.1377-27I324.00
amnion, adult pregnant day17.5.CNhs10488.583-22A817.80
aorta, adult.CNhs10498.46-23H117.21
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F529.12
bone (os femoris), neonate N16.CNhs11225.1525-43A621.64
bone (os femoris), neonate N20.CNhs11195.1350-25C324.73
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H717.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C743.73
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D164.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D450.70
corpora quadrigemina, adult.CNhs10501.16-22A415.73
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F114.58
cortex, adult.CNhs10473.12-14D513.56
cortex, neonate N30.CNhs11107.1392-42F217.13
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B214.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B127.39
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A224.63
epididymis, adult.CNhs10490.58-23B226.28
eyeball, adult.CNhs10484.31-12G416.20
eyeball, embryo E12.CNhs11016.345-16C643.33
eyeball, embryo E14.CNhs10521.399-16E242.07
eyeball, embryo E15.CNhs10593.426-16C930.25
eyeball, embryo E17.CNhs11023.1261-18D431.50
eyeball, neonate N00.CNhs11207.633-15C621.91
eyeball, neonate N01.CNhs11140.1532-43E730.11
eyeball, neonate N02.CNhs11205.1551-44G817.80
eyeball, neonate N16.CNhs11188.777-19A218.37
forelimb, embryo E11.CNhs10596.335-25E233.63
forelimb, embryo E12.CNhs10600.359-14H231.20
forelimb, embryo E13.CNhs10589.384-1E224.99
forelimb, embryo E14.CNhs10577.413-26A830.91
forelimb, embryo E15.CNhs11007.437-20E722.80
forelimb, embryo E17.CNhs10598.1517-43C423.33
forelimb, embryo E18.CNhs11008.1520-43B525.11
gonad, embryo E13.CNhs11044.1564-45I626.87
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C881.46
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D257.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D540.92
heart, embryo E11.CNhs10586.331-24E929.41
heart, embryo E12.CNhs11015.353-12F534.01
heart, embryo E13.CNhs11013.376-3I931.15
heart, embryo E14.CNhs10597.403-26D426.99
heart, embryo E15.CNhs11017.431-16C822.43
heart, embryo E16.CNhs11021.457-17C624.37
heart, embryo E17.CNhs11025.479-18E525.11
heart, embryo E18.CNhs11030.1283-20G323.61
heart, neonate N00.CNhs11213.639-21E322.07
heart, neonate N03.CNhs11221.1349-25I220.24
heart, neonate N10.CNhs11118.749-24G119.04
heart, neonate N16.CNhs11209.782-15G117.59
heart, neonate N20.CNhs11127.821-26I616.96
heart, neonate N25.CNhs11196.1351-25D320.86
heart, neonate N30.CNhs11202.1390-42D217.85
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G119.76
intestinal mucosa, adult.CNhs10506.860-29I37.60
intestine, adult.CNhs10496.178-9A321.16
intestine, embryo E12.CNhs11019.1251-16I538.39
intestine, embryo E13.CNhs11010.381-16D527.87
intestine, embryo E15.CNhs10602.976-16D825.64
intestine, embryo E16.CNhs10585.463-22H428.44
intestine, embryo E17.CNhs10582.482-18D321.57
intestine, embryo E18.CNhs10526.1289-20F729.68
intestine, neonate N00.CNhs11126.644-26D119.46
intestine, neonate N01.CNhs11192.1322-23E923.39
intestine, neonate N06.CNhs11102.688-20B819.86
intestine, neonate N07.CNhs11095.720-20F218.30
intestine, neonate N10.CNhs11098.755-23A521.06
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E317.72
intestine, neonate N30.CNhs11131.1384-42G118.12
kidney, embryo E14.CNhs10606.411-4I936.42
kidney, embryo E15.CNhs10997.434-16F831.76
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I236.25
kidney, embryo E18.CNhs11001.1288-20C727.74
kidney, neonate N00.CNhs11214.646-21G725.81
kidney, neonate N10.CNhs11206.758-6D523.52
kidney, neonate N20.CNhs11113.832-19I120.22
kidney, neonate N25.CNhs11122.1353-25F324.81
kidney, neonate N30.CNhs11203.1385-42H123.45
liver, adult pregnant day01.CNhs10466.508-5B234.39
liver, embryo E12.CNhs10601.355-15F834.37
liver, embryo E13.CNhs10524.378-3H638.13
liver, embryo E14.CNhs10594.409-16E133.95
liver, embryo E15.CNhs10520.433-16D734.69
liver, embryo E16.CNhs10523.462-17F533.28
liver, embryo E17.CNhs10510.481-18A339.98
liver, embryo E18.CNhs10579.499-43G442.58
liver, neonate N00.CNhs11117.641-24F436.16
liver, neonate N03.CNhs11123.1345-25G237.34
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H237.21
liver, neonate N10.CNhs11115.751-24B931.20
liver, neonate N20.CNhs11220.823-25A339.15
liver, neonate N25.CNhs11198.1368-26H139.29
liver, neonate N30.CNhs11106.1382-42D125.57
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G242.83
lung, embryo E14.CNhs10604.404-26F829.50
lung, embryo E15.CNhs11020.432-17C534.29
lung, embryo E16.CNhs10998.458-17B626.75
lung, embryo E17.CNhs10605.480-44A621.11
lung, embryo E18.CNhs10583.1287-20I616.90
lung, neonate N00.CNhs11224.640-42C618.73
lung, neonate N06.CNhs11212.683-20E523.01
lung, neonate N07.CNhs11111.715-19A321.48
lung, neonate N10.CNhs11219.750-23E616.58
lung, neonate N20.CNhs11109.822-18A417.86
lung, neonate N25.CNhs11119.1359-25C716.92
lung, neonate N30.CNhs11133.1394-42H216.20
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.21
mammary gland, adult lactating day02.CNhs10480.595-22B637.87
mammary gland, adult pregnant day19.CNhs10476.588-5H231.46
medulla oblongata, adult.CNhs10477.17-12C214.13
medulla oblongata, neonate N30.CNhs11200.1396-42A313.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C743.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C225.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E150.17
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E242.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E329.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D746.84
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D837.65
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D930.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D440.89
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D536.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D637.95
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I719.59
ovary, embryo E18.CNhs11040.505-44H715.85
ovary, neonate N00.CNhs11217.1299-22I427.37
oviduct, adult pregnant day01.CNhs10500.988-6G616.00
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F431.80
pancreas, embryo E15.CNhs11042.1556-45F230.23
pancreas, embryo E16.CNhs11003.460-26E544.51
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I739.35
pancreas, neonate N00.CNhs11105.645-26G931.53
pancreas, neonate N01.CNhs11138.1531-43D732.72
pancreas, neonate N02.CNhs11139.1539-43D833.51
pancreas, neonate N16.CNhs11136.787-43B648.04
pancreas, neonate N25.CNhs11094.1555-45E239.00
pancreas, neonate N30.CNhs11182.1548-44H538.16
pituitary gland, adult.CNhs10493.21-1G822.47
pituitary gland, embryo E12.CNhs11018.346-16E629.17
pituitary gland, embryo E13.CNhs11009.370-44C720.83
pituitary gland, embryo E14.CNhs11037.398-44A525.08
pituitary gland, embryo E15.CNhs10592.427-16B922.34
pituitary gland, embryo E16.CNhs11036.449-43F624.97
pituitary gland, embryo E17.CNhs11039.1265-44F523.70
pituitary gland, neonate N00.CNhs11190.1308-22E915.53
placenta, adult pregnant day10.CNhs10472.539-13I731.45
placenta, adult pregnant day17.CNhs10464.577-18G321.61
prostate, adult.CNhs10470.859-1F820.07
skin, adult.CNhs10492.30-1C315.66
skin, neonate N00.CNhs11124.650-25G429.06
skin, neonate N03.CNhs11215.662-22H324.49
skin, neonate N06.CNhs11097.693-20I525.19
skin, neonate N10.CNhs11108.762-6C426.43
small intestine, neonate N16.CNhs11114.790-21I117.78
spinal cord, adult.CNhs10505.24-13C914.46
spleen, adult.CNhs10465.25-2G217.94
spleen, embryo E16.CNhs11035.461-43C125.80
spleen, embryo E18.CNhs11011.1271-21F232.59
spleen, neonate N10.CNhs11116.752-24D121.85
spleen, neonate N20.CNhs11112.824-19H120.91
spleen, neonate N25.CNhs11099.1354-25G325.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D327.64
stomach, adult.CNhs10503.33-1H619.09
stomach, embryo E12.CNhs10588.356-43E342.07
stomach, embryo E15.CNhs10603.1252-16G829.68
stomach, embryo E16.CNhs11022.459-17D429.59
stomach, embryo E17.CNhs11006.1035-18D529.06
stomach, embryo E18.CNhs10999.1286-20C620.74
stomach, neonate N03.CNhs11193.1340-24B823.87
stomach, neonate N07.CNhs11210.718-18A921.57
stomach, neonate N25.CNhs11104.1355-25E422.51
stomach, neonate N30.CNhs11134.1386-42I114.26
submandibular gland, adult.CNhs10469.59-29C121.13
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F525.27
testis, embryo E15.CNhs11034.443-27C532.26
testis, embryo E16.CNhs11033.470-26G526.83
testis, embryo E17.CNhs11029.486-18I529.45
testis, embryo E18.CNhs11027.503-18G528.22
testis, neonate N00.CNhs11189.1300-22B724.41
testis, neonate N07.CNhs11222.726-26I421.87
testis, neonate N10.CNhs11204.763-44D918.25
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E27.20
thymus, adult.CNhs10471.38-12B520.22
thymus, embryo E14.CNhs11041.402-44I430.00
thymus, embryo E15.CNhs11005.430-45I227.53
thymus, embryo E16.CNhs11002.456-26C528.97
thymus, embryo E17.CNhs10581.478-18C123.27
thymus, embryo E18.CNhs10595.1273-19G419.47
thymus, neonate N02.CNhs11181.1541-43F817.67
thymus, neonate N03.CNhs11137.2104-43C719.94
thymus, neonate N06.CNhs11197.681-26C417.27
thymus, neonate N07.CNhs11211.713-19D316.23
thymus, neonate N10.CNhs11194.748-24E417.34
thymus, neonate N20.CNhs11186.820-7A214.52
thymus, neonate N25.CNhs11125.1362-25G718.67
thymus, neonate N30.CNhs11132.1393-42G215.31
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H354.16
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F763.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G558.26
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F531.72
uterus, adult.CNhs10509.92-27E520.70
vagina, adult.CNhs10502.89-27D518.44
vesicular gland, adult.CNhs10491.51-27F824.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.76
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A521.15
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I842.55
whole body, embryo E12.CNhs10587.857-27C928.73
whole body, embryo E13.CNhs10512.372-23H232.78
whole body, embryo E14.5.CNhs10578.420-27D230.87
whole body, embryo E14.CNhs10519.395-14B139.20
whole body, embryo E16.CNhs10514.453-14F235.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.29
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.15
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G531.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.90
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G528.29
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G523.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.98
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G528.14
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G527.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G536.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G529.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G535.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.40
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G527.27
whole body, embryo E17.5.CNhs10513.490-9F924.31
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B325.26
whole body, neonate N00.CNhs10525.657-19C226.64
whole body, neonate N01.CNhs10576.659-23C621.62
whole body, neonate N06.CNhs10515.692-21D125.81
whole body, neonate N10.CNhs10518.761-6B434.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk9.32e-0890
trunk region element1.67e-0779
exocrine gland2.91e-0725
exocrine system2.91e-0725
liver4.87e-0722
epithelial sac4.87e-0722
digestive gland4.87e-0722
epithelium of foregut-midgut junction4.87e-0722
anatomical boundary4.87e-0722
hepatobiliary system4.87e-0722
foregut-midgut junction4.87e-0722
hepatic diverticulum4.87e-0722
liver primordium4.87e-0722
septum transversum4.87e-0722
liver bud4.87e-0722
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:40547379..40547433,%2B&oldid=4302513"