FFCP PHASE1:Hg19::chr10:3214965..3214984,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10531 | |EntrezGene=10531 | ||
| Line 8: | Line 8: | ||
|UniProt=E7ES23 | |UniProt=E7ES23 | ||
|association_with_transcript=0bp_to_ENST00000451104_5end | |association_with_transcript=0bp_to_ENST00000451104_5end | ||
|cluster_id=chr10:3214965..3214984,- | |||
|description=CAGE_peak_1_at_PITRM1_5end | |description=CAGE_peak_1_at_PITRM1_5end | ||
|id=chr10:3214965..3214984,- | |id=chr10:3214965..3214984,- | ||
Latest revision as of 23:32, 17 September 2015
| Short description: | p1@PITRM1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_PITRM1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000451104_5end |
| EntrezGene: | PITRM1 |
| HGNC: | 17663 |
| UniProt: | E7ES23 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@PITRM1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 2.78e-18 | 121 |
| embryonic cell | 3.25e-14 | 250 |
| vascular associated smooth muscle cell | 4.21e-12 | 32 |
| smooth muscle cell | 1.35e-11 | 43 |
| smooth muscle myoblast | 1.35e-11 | 43 |
| endothelial cell of vascular tree | 7.77e-11 | 24 |
| fibroblast | 7.89e-11 | 76 |
| muscle precursor cell | 1.26e-10 | 58 |
| myoblast | 1.26e-10 | 58 |
| multi-potent skeletal muscle stem cell | 1.26e-10 | 58 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| vasculature | 1.51e-23 | 78 |
| vascular system | 1.51e-23 | 78 |
| epithelial tube open at both ends | 8.12e-22 | 59 |
| blood vessel | 8.12e-22 | 59 |
| blood vasculature | 8.12e-22 | 59 |
| vascular cord | 8.12e-22 | 59 |
| vessel | 1.82e-21 | 68 |
| artery | 1.41e-20 | 42 |
| arterial blood vessel | 1.41e-20 | 42 |
| arterial system | 1.41e-20 | 42 |
Showing 1 to 10 of 55 entries
