FFCP PHASE1:Mm9::chr11:96112988..96113010,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:96112988..96113010,+
|short_description=p2@Gm53
|description=CAGE_peak_2_at_Gm53_5end
|association_with_transcript=14bp_to_NR_037977_5end
|EntrezGene=193...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=193022 | |EntrezGene=193022 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_NR_037977_5end | |||
|cluster_id=chr11:96112988..96113010,+ | |||
|description=CAGE_peak_2_at_Gm53_5end | |||
|id=chr11:96112988..96113010,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,6.17e-07,3;CL:0002293,9.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!6.86e-15!21;UBERON:0002113!4.06e-11!14;UBERON:0003918!4.06e-11!14;UBERON:0005095!4.06e-11!14;UBERON:0007687!4.06e-11!14;UBERON:0006554!7.60e-11!16;UBERON:0001008!8.77e-11!17;UBERON:0003064!2.07e-08!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.81e-31,21;UBERON:0002113,3.01e-22,14;UBERON:0003918,3.01e-22,14;UBERON:0011143,3.01e-22,14;UBERON:0005095,3.01e-22,14;UBERON:0007687,3.01e-22,14;UBERON:0006554,1.64e-19,18;UBERON:0001008,2.82e-18,19;UBERON:0003064,8.66e-16,14;UBERON:0003103,1.82e-12,43;UBERON:0002240,4.33e-12,6;UBERON:0005174,4.33e-12,6;UBERON:0001137,4.33e-12,6;UBERON:0003104,6.38e-12,61;UBERON:0009142,6.38e-12,61;UBERON:0002369,2.24e-11,7;UBERON:0006858,2.24e-11,7;UBERON:0005172,9.28e-11,49;UBERON:0005173,9.28e-11,49;UBERON:0002417,9.28e-11,49;UBERON:0000916,9.28e-11,49;UBERON:0001948,2.04e-10,5;UBERON:0002315,2.04e-10,5;UBERON:0000080,3.93e-07,4;UBERON:0005904,3.93e-07,4;UBERON:0006947,3.93e-07,4;UBERON:0002120,3.93e-07,4;UBERON:0004054,3.93e-07,4;UBERON:0004875,3.93e-07,4;UBERON:0004876,3.93e-07,4;UBERON:0005721,3.93e-07,4;UBERON:0005754,3.93e-07,4;UBERON:0007297,3.93e-07,4;UBERON:0002257,6.17e-07,3 | |||
|phase1_expression=0,0.697950815278722,1.81999695755814,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.45881856213434,0.57423196411502,1.7230479846363,1.07735616342945,7.79096019771133,0.504060259519861,6.43018480900384,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,1.46837401729345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,5.99867067247988,6.84692476950002,0,0,0,0,0,0,0,0,0,0,0,0,8.83885756421003,5.26775218956681,7.45597783301202,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0.70667914902068,0,6.41632387071589,2.54805239706646,21.3320010945999,0,0,0,0.5709193985953,0,2.82040064223167,1.21439728736295,2.13125834818499,1.38369298353635,2.11011696773672,1.99900802130698,2.38766523526383,0,0,0,0.161766849947409,0.220841518460394,0,9.31958806090611,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.2220723662038,1.11966273549084,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0.474529061544512,0.164698954724011,0.754005626400808,0.994782360205754,0.38992817423824,0,1.29682829924817,3.18626037206988,1.70701110857774,2.39921876480431,1.1270773567308,1.62921062276251,2.32742984601151,3.22624771495465,3.03535378196435,3.09981310757165,3.1399745568275,7.40382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.890328018336276,1.14020871547503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.704015124191131,0.21183207086382,47.4136055818168,2.4732937941222,0.968786560175433,0.72375509913787,1.90995750405018,1.31312719796049,1.1659233465194,3.70850604021019,0,0.412773735926445,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0,0,9.33227807700909,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,0.168956125490778,1.5256441023948,0.2604087696879,1.57289016638566,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503653849092235,0,0.187682475451182,0,0.214368379079066,27.0848936179096,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.682934423016537,0.486213434136588,0.628839487883947,0.551530525350042,0.222246727801615,0.824140228955577,0.962757628775446,0,0.50695859978048,0.754505365544305,0.37456602987953,0.512201219238954,0.402048282689293,0.476293691283074,0,0.578727661391115,0,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.679020569229309,1.12228454331548,0.474540072496697,0.689531376628944,0.818462086339379,0.154936841185966,0.964533054905707,0.249810577937946,1.16965804222704,0.429742108096597,0.382576664137687,0.441182838239031,0 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|phase1_expression=0,0.697950815278722,1.81999695755814,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0.159992422793407,0.45881856213434,0.57423196411502,1.7230479846363,1.07735616342945,7.79096019771133,0.504060259519861,6.43018480900384,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,1.31790010585369,1.46837401729345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0,0,0,5.99867067247988,6.84692476950002,0,0,0,0,0,0,0,0,0,0,0,0,8.83885756421003,5.26775218956681,7.45597783301202,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0.519572009205738,0.70667914902068,0,6.41632387071589,2.54805239706646,21.3320010945999,0,0,0,0.5709193985953,0,2.82040064223167,1.21439728736295,2.13125834818499,1.38369298353635,2.11011696773672,1.99900802130698,2.38766523526383,0,0,0,0.161766849947409,0.220841518460394,0,9.31958806090611,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.2220723662038,1.11966273549084,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.464473343720877,0,0,0,0,0.474529061544512,0.164698954724011,0.754005626400808,0.994782360205754,0.38992817423824,0,1.29682829924817,3.18626037206988,1.70701110857774,2.39921876480431,1.1270773567308,1.62921062276251,2.32742984601151,3.22624771495465,3.03535378196435,3.09981310757165,3.1399745568275,7.40382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0.169745085775188,0.469380496577004,0.335012514883631,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.890328018336276,1.14020871547503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0.704015124191131,0.21183207086382,47.4136055818168,2.4732937941222,0.968786560175433,0.72375509913787,1.90995750405018,1.31312719796049,1.1659233465194,3.70850604021019,0,0.412773735926445,0.370389054739423,0.376736914009382,0.136694227721025,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0,0,9.33227807700909,0,0,0.149516546043979,0.496375471371293,0.388902376688095,0.387479470433193,0.168956125490778,1.5256441023948,0.2604087696879,1.57289016638566,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503653849092235,0,0.187682475451182,0,0.214368379079066,27.0848936179096,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.682934423016537,0.486213434136588,0.628839487883947,0.551530525350042,0.222246727801615,0.824140228955577,0.962757628775446,0,0.50695859978048,0.754505365544305,0.37456602987953,0.512201219238954,0.402048282689293,0.476293691283074,0,0.578727661391115,0,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.679020569229309,1.12228454331548,0.474540072496697,0.689531376628944,0.818462086339379,0.154936841185966,0.964533054905707,0.249810577937946,1.16965804222704,0.429742108096597,0.382576664137687,0.441182838239031,0 | ||
|short_description=p2@Gm53 | |||
}} | }} |
Latest revision as of 01:15, 26 September 2015
Short description: | p2@Gm53 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm53_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_NR_037977_5end |
EntrezGene: | Gm53 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 6.17e-07 | 3 |
epithelial cell of thymus | 9.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 2.81e-31 | 21 |
kidney | 3.01e-22 | 14 |
kidney mesenchyme | 3.01e-22 | 14 |
upper urinary tract | 3.01e-22 | 14 |
kidney rudiment | 3.01e-22 | 14 |
kidney field | 3.01e-22 | 14 |
urinary system structure | 1.64e-19 | 18 |
renal system | 2.82e-18 | 19 |
intermediate mesoderm | 8.66e-16 | 14 |
compound organ | 1.82e-12 | 43 |
spinal cord | 4.33e-12 | 6 |
dorsal region element | 4.33e-12 | 6 |
dorsum | 4.33e-12 | 6 |
mesenchyme | 6.38e-12 | 61 |
entire embryonic mesenchyme | 6.38e-12 | 61 |
adrenal gland | 2.24e-11 | 7 |
adrenal/interrenal gland | 2.24e-11 | 7 |
abdomen element | 9.28e-11 | 49 |
abdominal segment element | 9.28e-11 | 49 |
abdominal segment of trunk | 9.28e-11 | 49 |
abdomen | 9.28e-11 | 49 |
regional part of spinal cord | 2.04e-10 | 5 |
gray matter of spinal cord | 2.04e-10 | 5 |
mesonephros | 3.93e-07 | 4 |
duct of male reproductive system | 3.93e-07 | 4 |
male genital duct | 3.93e-07 | 4 |
pronephros | 3.93e-07 | 4 |
internal male genitalia | 3.93e-07 | 4 |
nephrogenic cord | 3.93e-07 | 4 |
urogenital ridge | 3.93e-07 | 4 |
pronephric mesoderm | 3.93e-07 | 4 |
rostral part of nephrogenic cord | 3.93e-07 | 4 |
presumptive pronephric mesoderm | 3.93e-07 | 4 |
ventral horn of spinal cord | 6.17e-07 | 3 |