FFCP PHASE1:Mm9::chr11:96145537..96145556,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:96145537..96145556,+
|short_description=p6@Hoxb7
|description=CAGE_peak_6_at_Hoxb7_5end
|association_with_transcript=-14bp_to_ENSMUST00000049352_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=15415 | |EntrezGene=15415 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=P09024 | |UniProt=P09024 | ||
|association_with_transcript=-14bp_to_ENSMUST00000049352_5end | |||
|cluster_id=chr11:96145537..96145556,+ | |||
|description=CAGE_peak_6_at_Hoxb7_5end | |||
|id=chr11:96145537..96145556,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.89e-18,3;CL:0002611,2.61e-12,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!3.57e-17!21;UBERON:0001008!6.82e-11!17;UBERON:0002113!4.94e-10!14;UBERON:0003918!4.94e-10!14;UBERON:0005095!4.94e-10!14;UBERON:0007687!4.94e-10!14;UBERON:0006554!5.35e-10!16;UBERON:0002342!1.46e-09!10;UBERON:0005062!1.46e-09!10;UBERON:0003064!6.57e-09!14;UBERON:0002240!9.23e-08!6;UBERON:0005174!9.23e-08!6;UBERON:0001137!9.23e-08!6;UBERON:0002369!4.97e-07!7;UBERON:0006858!4.97e-07!7;UBERON:0001948!9.64e-07!5;UBERON:0002315!9.64e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.86e-34,6;UBERON:0005174,2.86e-34,6;UBERON:0001137,2.86e-34,6;UBERON:0001948,6.73e-29,5;UBERON:0002315,6.73e-29,5;UBERON:0000489,9.62e-26,21;UBERON:0002257,2.89e-18,3;UBERON:0003076,5.39e-17,12;UBERON:0003057,5.39e-17,12;UBERON:0002256,2.61e-12,2;UBERON:0003103,6.13e-12,43;UBERON:0000162,4.26e-08,3;UBERON:0001353,4.26e-08,3;UBERON:0000163,4.26e-08,3;UBERON:0006866,4.26e-08,3;UBERON:0001046,4.26e-08,3;UBERON:0000164,4.26e-08,3;UBERON:0000931,4.26e-08,3;UBERON:0001008,4.15e-07,19;UBERON:0001153,6.93e-07,1;UBERON:0001045,6.93e-07,1;UBERON:0001255,7.89e-07,1;UBERON:0001556,7.89e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,3.53389665522582,0,0,0,0,0,0,0,0,0,0,0,0,5.59794312399969,2.56269025438385,3.72798891650601,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.693941307064543,0.304465478312141,0.461230994512117,0.753613202763113,1.29347577849275,0.628332956648377,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,0.758168275301024,0,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,1.51734320762465,0.456994050438915,3.38123207019241,0.407302655690628,0.581857461502877,1.33258057791605,0.252946148497029,0.442830443938806,0.470996183524124,0.616985819609003,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0.551873492609465,0.321101179975584,0,0,0,0.631016438832513,1.17131623288992,0.646270193198397,0,0,0,0,0,0.790575555893047,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.542816324353403,0,0.164140899745061,0.582961673259701,2.22510362412612,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0.108005340821801,0.418176592028937,0,0,0.247960367176008,0.26175594198403,1.94422459937689,0,0,0,0,0,0,0,0,0,0.314578033277133,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73870634628971,0.187682475451182,0.549454872801795,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.492522411877817,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.882365676478062,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0.570070258369122,0.252030129759931,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,3.53389665522582,0,0,0,0,0,0,0,0,0,0,0,0,5.59794312399969,2.56269025438385,3.72798891650601,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.33597925158342,0.693941307064543,0.304465478312141,0.461230994512117,0.753613202763113,1.29347577849275,0.628332956648377,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.497627882440372,0.758168275301024,0,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.232236671860439,0.515469845288373,0,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.216138049874694,0,1.51734320762465,0.456994050438915,3.38123207019241,0.407302655690628,0.581857461502877,1.33258057791605,0.252946148497029,0.442830443938806,0.470996183524124,0.616985819609003,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0,0.169745085775188,0,0,0,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0.551873492609465,0.321101179975584,0,0,0,0.631016438832513,1.17131623288992,0.646270193198397,0,0,0,0,0,0.790575555893047,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.542816324353403,0,0.164140899745061,0.582961673259701,2.22510362412612,0,0,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.406638934253697,0.108005340821801,0.418176592028937,0,0,0.247960367176008,0.26175594198403,1.94422459937689,0,0,0,0,0,0,0,0,0,0.314578033277133,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73870634628971,0.187682475451182,0.549454872801795,1.2862102744744,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0.354951612318675,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.492522411877817,0,0,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.882365676478062,0 | ||
|short_description=p6@Hoxb7 | |||
}} | }} |
Latest revision as of 01:21, 26 September 2015
Short description: | p6@Hoxb7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Hoxb7_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -14bp_to_ENSMUST00000049352_5end |
EntrezGene: | Hoxb7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.89e-18 | 3 |
neuron of the dorsal spinal cord | 2.61e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.86e-34 | 6 |
dorsal region element | 2.86e-34 | 6 |
dorsum | 2.86e-34 | 6 |
regional part of spinal cord | 6.73e-29 | 5 |
gray matter of spinal cord | 6.73e-29 | 5 |
cavitated compound organ | 9.62e-26 | 21 |
ventral horn of spinal cord | 2.89e-18 | 3 |
posterior neural tube | 5.39e-17 | 12 |
chordal neural plate | 5.39e-17 | 12 |
dorsal horn of spinal cord | 2.61e-12 | 2 |
compound organ | 6.13e-12 | 43 |
cloaca | 4.26e-08 | 3 |
anal region | 4.26e-08 | 3 |
embryonic cloaca | 4.26e-08 | 3 |
terminal part of digestive tract | 4.26e-08 | 3 |
hindgut | 4.26e-08 | 3 |
primitive urogenital sinus | 4.26e-08 | 3 |
proctodeum | 4.26e-08 | 3 |
renal system | 4.15e-07 | 19 |
caecum | 6.93e-07 | 1 |
midgut | 6.93e-07 | 1 |
urinary bladder | 7.89e-07 | 1 |
lower urinary tract | 7.89e-07 | 1 |