FFCP PHASE1:Mm9::chr11:98656809..98656888,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:98656809..98656888,+
|short_description=p1@Msl1
|description=CAGE_peak_1_at_Msl1_5end
|association_with_transcript=0bp_to_ENSMUST00000037915_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74026 | |EntrezGene=74026 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PDM1 | |UniProt=Q6PDM1 | ||
|association_with_transcript=0bp_to_ENSMUST00000037915_5end | |||
|cluster_id=chr11:98656809..98656888,+ | |||
|description=CAGE_peak_1_at_Msl1_5end | |||
|id=chr11:98656809..98656888,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.53e-13!50;CL:0002319!8.85e-12!43;CL:0000221!2.50e-11!44;CL:0000133!2.50e-11!44;CL:0000393!3.06e-11!39;CL:0000211!3.06e-11!39;CL:0002321!2.08e-10!70;CL:0000220!2.08e-10!70;CL:0000540!3.56e-09!33;CL:0000047!3.56e-09!33;CL:0000031!3.56e-09!33;CL:0000404!3.56e-09!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.85e-12,43;CL:0000221,2.50e-11,44;CL:0000133,2.50e-11,44;CL:0000393,3.06e-11,39;CL:0000211,3.06e-11,39;CL:0002321,2.08e-10,70;CL:0000540,3.56e-09,33;CL:0000047,3.56e-09,33;CL:0000031,3.56e-09,33;CL:0000404,3.56e-09,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.64e-18!73;UBERON:0005743!6.64e-18!73;UBERON:0000073!1.32e-17!75;UBERON:0001016!1.32e-17!75;UBERON:0004121!5.78e-13!102;UBERON:0000924!5.78e-13!102;UBERON:0006601!5.78e-13!102;UBERON:0001049!1.61e-09!52;UBERON:0005068!1.61e-09!52;UBERON:0006241!1.61e-09!52;UBERON:0007135!1.61e-09!52;UBERON:0000955!8.67e-09!50;UBERON:0006238!8.67e-09!50;UBERON:0002616!2.11e-08!49;UBERON:0002346!4.76e-08!71;UBERON:0003075!4.76e-08!71;UBERON:0007284!4.76e-08!71;UBERON:0002020!2.27e-07!34;UBERON:0003080!6.67e-07!40;UBERON:0002780!8.21e-07!39;UBERON:0001890!8.21e-07!39;UBERON:0006240!8.21e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.64e-18,73;UBERON:0001016,1.32e-17,75;UBERON:0004121,1.66e-12,95;UBERON:0000924,1.66e-12,95;UBERON:0006601,1.66e-12,95;UBERON:0000073,7.89e-11,54;UBERON:0001049,1.61e-09,52;UBERON:0005068,1.61e-09,52;UBERON:0006241,1.61e-09,52;UBERON:0007135,1.61e-09,52;UBERON:0002346,1.04e-07,64;UBERON:0003075,1.04e-07,64;UBERON:0007284,1.04e-07,64;UBERON:0000955,1.68e-07,47;UBERON:0006238,1.68e-07,47;UBERON:0002020,2.27e-07,34;UBERON:0002616,3.91e-07,46;UBERON:0003080,6.67e-07,40;UBERON:0002780,8.21e-07,39;UBERON:0001890,8.21e-07,39;UBERON:0006240,8.21e-07,39;UBERON:0010371,8.78e-07,73 | |||
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| ||
|short_description=p1@Msl1 | |||
}} | }} |
Latest revision as of 03:26, 26 September 2015
Short description: | p1@Msl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Msl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 0bp_to_ENSMUST00000037915_5end |
EntrezGene: | Msl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.85e-12 | 43 |
ectodermal cell | 2.50e-11 | 44 |
neurectodermal cell | 2.50e-11 | 44 |
electrically responsive cell | 3.06e-11 | 39 |
electrically active cell | 3.06e-11 | 39 |
embryonic cell | 2.08e-10 | 70 |
neuron | 3.56e-09 | 33 |
neuronal stem cell | 3.56e-09 | 33 |
neuroblast | 3.56e-09 | 33 |
electrically signaling cell | 3.56e-09 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.64e-18 | 73 |
nervous system | 1.32e-17 | 75 |
ectoderm-derived structure | 1.66e-12 | 95 |
ectoderm | 1.66e-12 | 95 |
presumptive ectoderm | 1.66e-12 | 95 |
regional part of nervous system | 7.89e-11 | 54 |
neural tube | 1.61e-09 | 52 |
neural rod | 1.61e-09 | 52 |
future spinal cord | 1.61e-09 | 52 |
neural keel | 1.61e-09 | 52 |
neurectoderm | 1.04e-07 | 64 |
neural plate | 1.04e-07 | 64 |
presumptive neural plate | 1.04e-07 | 64 |
brain | 1.68e-07 | 47 |
future brain | 1.68e-07 | 47 |
gray matter | 2.27e-07 | 34 |
regional part of brain | 3.91e-07 | 46 |
anterior neural tube | 6.67e-07 | 40 |
regional part of forebrain | 8.21e-07 | 39 |
forebrain | 8.21e-07 | 39 |
future forebrain | 8.21e-07 | 39 |
ecto-epithelium | 8.78e-07 | 73 |